RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 TBC1D12O60347 775 aa10.35□□□□□ -0.75
HMGXB4-207ENST00000498212 TLR2O60603 784 aa10.35□□□□□ -0.75
HMGXB4-207ENST00000498212 CTNND1O60716 968 aaKnown RBP10.35□□□□□ -0.75
HMGXB4-207ENST00000498212 SLURP2P0DP57 97 aa10.35□□□□□ -0.75
HMGXB4-207ENST00000498212 PTPRAP18433 802 aa10.35□□□□□ -0.75
HMGXB4-207ENST00000498212 SOX10P56693 466 aa10.35□□□□□ -0.75
HMGXB4-207ENST00000498212 PDE3AQ14432 1141 aa10.35□□□□□ -0.75
HMGXB4-207ENST00000498212 ANKRD23Q86SG2 305 aa10.35□□□□□ -0.75
HMGXB4-207ENST00000498212 ADGRA1Q86SQ6 560 aa10.35□□□□□ -0.75
HMGXB4-207ENST00000498212 CLASRPQ8N2M8 674 aaKnown RBP10.35□□□□□ -0.75
HMGXB4-207ENST00000498212 KIF1BPQ96EK5 621 aa10.35□□□□□ -0.75
HMGXB4-207ENST00000498212 EFCC1Q9HA90 598 aa10.35□□□□□ -0.75
HMGXB4-207ENST00000498212 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.35□□□□□ -0.75
HMGXB4-207ENST00000498212 PIH1D3Q9NQM4 214 aaKnown RBP10.35□□□□□ -0.75
HMGXB4-207ENST00000498212 MYH8P13535 1937 aa10.35□□□□□ -0.75
HMGXB4-207ENST00000498212 FAM196BA6NMK8 535 aa10.34□□□□□ -0.75
HMGXB4-207ENST00000498212 PDHXO00330 501 aa10.34□□□□□ -0.75
HMGXB4-207ENST00000498212 CXCL11O14625 94 aa10.34□□□□□ -0.75
HMGXB4-207ENST00000498212 IDH1O75874 414 aaKnown RBP10.34□□□□□ -0.75
HMGXB4-207ENST00000498212 PPP4CP60510 307 aa10.34□□□□□ -0.75
HMGXB4-207ENST00000498212 ARHGEF6Q15052 776 aa10.34□□□□□ -0.75
HMGXB4-207ENST00000498212 C20orf194Q5TEA3 1177 aa10.34□□□□□ -0.75
HMGXB4-207ENST00000498212 SIRT2Q8IXJ6 389 aa10.34□□□□□ -0.75
HMGXB4-207ENST00000498212 TGFBRAP1Q8WUH2 860 aa10.34□□□□□ -0.75
HMGXB4-207ENST00000498212 PTPN22Q9Y2R2 807 aa10.34□□□□□ -0.75
HMGXB4-207ENST00000498212 NDUFB9Q9Y6M9 179 aa10.34□□□□□ -0.75
HMGXB4-207ENST00000498212 ZHX2Q9Y6X8 837 aa10.34□□□□□ -0.75
HMGXB4-207ENST00000498212 DDX60LQ5H9U9 1706 aaKnown RBP10.33□□□□□ -0.76
HMGXB4-207ENST00000498212 RAB11FIP3O75154 756 aa10.33□□□□□ -0.76
HMGXB4-207ENST00000498212 IFIT2P09913 472 aaKnown RBP10.33□□□□□ -0.76
HMGXB4-207ENST00000498212 CYP7A1P22680 504 aa10.33□□□□□ -0.76
HMGXB4-207ENST00000498212 MOGSQ13724 837 aa10.33□□□□□ -0.76
HMGXB4-207ENST00000498212 KIF22Q14807 665 aa10.33□□□□□ -0.76
HMGXB4-207ENST00000498212 DHX36Q9H2U1 1008 aaKnown RBP10.33□□□□□ -0.76
HMGXB4-207ENST00000498212 ANTXR1Q9H6X2 564 aa10.33□□□□□ -0.76
HMGXB4-207ENST00000498212 HERC5Q9UII4 1024 aaKnown RBP10.33□□□□□ -0.76
HMGXB4-207ENST00000498212 AFG3L2Q9Y4W6 797 aa10.33□□□□□ -0.76
HMGXB4-207ENST00000498212 FLT1P17948 1338 aa10.33□□□□□ -0.76
HMGXB4-207ENST00000498212 A0A0G2JLL6 359 aaPredicted RBP10.32□□□□□ -0.76
HMGXB4-207ENST00000498212 CAP1Q01518 475 aa10.32□□□□□ -0.76
HMGXB4-207ENST00000498212 MAP3K12Q12852 859 aa10.32□□□□□ -0.76
HMGXB4-207ENST00000498212 TTF1Q15361 905 aaPredicted RBP10.32□□□□□ -0.76
HMGXB4-207ENST00000498212 TMED8Q6PL24 325 aaPredicted RBP10.32□□□□□ -0.76
HMGXB4-207ENST00000498212 C17orf99Q6UX52 265 aa10.32□□□□□ -0.76
HMGXB4-207ENST00000498212 GADL1Q6ZQY3 521 aa10.32□□□□□ -0.76
HMGXB4-207ENST00000498212 FASTKD5Q7L8L6 764 aaKnown RBP10.32□□□□□ -0.76
HMGXB4-207ENST00000498212 PRRT2Q7Z6L0 340 aaPredicted RBP10.32□□□□□ -0.76
HMGXB4-207ENST00000498212 CERS3Q8IU89 383 aa10.32□□□□□ -0.76
HMGXB4-207ENST00000498212 MAPKAPK5Q8IW41 473 aa10.32□□□□□ -0.76
HMGXB4-207ENST00000498212 MAGEB6Q8N7X4 407 aa10.32□□□□□ -0.76
HMGXB4-207ENST00000498212 PARK7Q99497 189 aaKnown RBP10.32□□□□□ -0.76
HMGXB4-207ENST00000498212 BCL11AQ9H165 835 aa10.32□□□□□ -0.76
HMGXB4-207ENST00000498212 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.32□□□□□ -0.76
HMGXB4-207ENST00000498212 PI4KBQ9UBF8 816 aa10.32□□□□□ -0.76
HMGXB4-207ENST00000498212 BAZ2AQ9UIF9 1905 aaKnown RBP10.31□□□□□ -0.76
HMGXB4-207ENST00000498212 TRIM75PA6NK02 468 aa10.31□□□□□ -0.76
HMGXB4-207ENST00000498212 CAP2P40123 477 aa10.31□□□□□ -0.76
HMGXB4-207ENST00000498212 DYNLL1P63167 89 aaKnown RBP10.31□□□□□ -0.76
HMGXB4-207ENST00000498212 LACTBP83111 547 aaPredicted RBP10.31□□□□□ -0.76
HMGXB4-207ENST00000498212 GPAT2Q6NUI2 795 aa10.31□□□□□ -0.76
HMGXB4-207ENST00000498212 CCDC84Q86UT8 332 aaPredicted RBP10.31□□□□□ -0.76
HMGXB4-207ENST00000498212 MIGA1Q8NAN2 632 aa10.31□□□□□ -0.76
HMGXB4-207ENST00000498212 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.31□□□□□ -0.76
HMGXB4-207ENST00000498212 TRIM34Q9BYJ4 488 aa10.31□□□□□ -0.76
HMGXB4-207ENST00000498212 CPA4Q9UI42 421 aa10.31□□□□□ -0.76
HMGXB4-207ENST00000498212 PALD1Q9ULE6 856 aa10.31□□□□□ -0.76
HMGXB4-207ENST00000498212 ADGRA2Q96PE1 1338 aa10.31□□□□□ -0.76
HMGXB4-207ENST00000498212 GNRH1P01148 92 aa10.3□□□□□ -0.76
HMGXB4-207ENST00000498212 HLA-DOAP06340 250 aa10.3□□□□□ -0.76
HMGXB4-207ENST00000498212 USP5P45974 858 aa10.3□□□□□ -0.76
HMGXB4-207ENST00000498212 FOXP4Q8IVH2 680 aaPredicted RBP10.3□□□□□ -0.76
HMGXB4-207ENST00000498212 CRACR2BQ8N4Y2 399 aaPredicted RBP10.3□□□□□ -0.76
HMGXB4-207ENST00000498212 SPDYE1Q8NFV5 336 aaPredicted RBP10.3□□□□□ -0.76
HMGXB4-207ENST00000498212 DNAJC2Q99543 621 aaKnown RBP10.3□□□□□ -0.76
HMGXB4-207ENST00000498212 TBC1D2Q9BYX2 928 aa10.3□□□□□ -0.76
HMGXB4-207ENST00000498212 ARHGAP39Q9C0H5 1083 aa10.3□□□□□ -0.76
HMGXB4-207ENST00000498212 SAP30BPQ9UHR5 308 aaKnown RBP10.3□□□□□ -0.76
HMGXB4-207ENST00000498212 SSUH2Q9Y2M2 353 aa10.3□□□□□ -0.76
HMGXB4-207ENST00000498212 SLC45A1Q9Y2W3 748 aa10.3□□□□□ -0.76
HMGXB4-207ENST00000498212 USP17L5A8MUK1 530 aa10.29□□□□□ -0.76
HMGXB4-207ENST00000498212 GOLIM4O00461 696 aa10.29□□□□□ -0.76
HMGXB4-207ENST00000498212 ECM2O94769 699 aaPredicted RBP10.29□□□□□ -0.76
HMGXB4-207ENST00000498212 CYP2C8P10632 490 aa10.29□□□□□ -0.76
HMGXB4-207ENST00000498212 SPP2Q13103 211 aa10.29□□□□□ -0.76
HMGXB4-207ENST00000498212 RRP1BQ14684 758 aaKnown RBP10.29□□□□□ -0.76
HMGXB4-207ENST00000498212 SLC9C2Q5TAH2 1124 aa10.29□□□□□ -0.76
HMGXB4-207ENST00000498212 METTL16Q86W50 562 aaKnown RBP10.29□□□□□ -0.76
HMGXB4-207ENST00000498212 PROCA1Q8NCQ7 364 aaPredicted RBP10.29□□□□□ -0.76
HMGXB4-207ENST00000498212 ZNF280CQ8ND82 737 aa10.29□□□□□ -0.76
HMGXB4-207ENST00000498212 LRRCC1Q9C099 1032 aa10.29□□□□□ -0.76
HMGXB4-207ENST00000498212 DNAJC18Q9H819 358 aa10.29□□□□□ -0.76
HMGXB4-207ENST00000498212 AS3MTQ9HBK9 375 aa10.29□□□□□ -0.76
HMGXB4-207ENST00000498212 AGTPBP1Q9UPW5 1226 aa10.29□□□□□ -0.76
HMGXB4-207ENST00000498212 PTCH2Q9Y6C5 1203 aa10.29□□□□□ -0.76
HMGXB4-207ENST00000498212 DOCK3Q8IZD9 2030 aa10.29□□□□□ -0.76
HMGXB4-207ENST00000498212 MAGEB6P1A0A0J9YX57 407 aa10.28□□□□□ -0.76
HMGXB4-207ENST00000498212 ASNSP08243 561 aa10.28□□□□□ -0.76
HMGXB4-207ENST00000498212 BCRP11274 1271 aa10.28□□□□□ -0.76
HMGXB4-207ENST00000498212 PDE6AP16499 860 aa10.28□□□□□ -0.76
HMGXB4-207ENST00000498212 PSMC4P43686 418 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms