RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 SPDYE2BA6NHP3 402 aa16.82■□□□□ 0.28
VPS26A-209ENST00000497564 AOC2O75106 756 aa16.82■□□□□ 0.28
VPS26A-209ENST00000497564 CD2BP2O95400 341 aaKnown RBP16.82■□□□□ 0.28
VPS26A-209ENST00000497564 SPDYE6P0CI01 402 aa16.82■□□□□ 0.28
VPS26A-209ENST00000497564 TDO2P48775 406 aa16.82■□□□□ 0.28
VPS26A-209ENST00000497564 HUNKP57058 714 aa16.82■□□□□ 0.28
VPS26A-209ENST00000497564 RHBDL3P58872 404 aa16.82■□□□□ 0.28
VPS26A-209ENST00000497564 BLOC1S2Q6QNY1 142 aa16.82■□□□□ 0.28
VPS26A-209ENST00000497564 MOB2Q70IA6 237 aa16.82■□□□□ 0.28
VPS26A-209ENST00000497564 MTMR14Q8NCE2 650 aa16.82■□□□□ 0.28
VPS26A-209ENST00000497564 ZDHHC15Q96MV8 337 aa16.82■□□□□ 0.28
VPS26A-209ENST00000497564 NEK1Q96PY6 1258 aa16.82■□□□□ 0.28
VPS26A-209ENST00000497564 NBPF3Q9H094 633 aa16.82■□□□□ 0.28
VPS26A-209ENST00000497564 DCP1AQ9NPI6 582 aaPredicted RBP16.82■□□□□ 0.28
VPS26A-209ENST00000497564 SERPINA10Q9UK55 444 aa16.82■□□□□ 0.28
VPS26A-209ENST00000497564 RPS6KB1P23443 525 aa16.81■□□□□ 0.28
VPS26A-209ENST00000497564 MMP14P50281 582 aa16.81■□□□□ 0.28
VPS26A-209ENST00000497564 SBK1Q52WX2 424 aa16.81■□□□□ 0.28
VPS26A-209ENST00000497564 SH3RF3Q8TEJ3 882 aaPredicted RBP16.81■□□□□ 0.28
VPS26A-209ENST00000497564 ZIC5Q96T25 663 aa16.81■□□□□ 0.28
VPS26A-209ENST00000497564 UPF3BQ9BZI7 483 aaKnown RBP16.81■□□□□ 0.28
VPS26A-209ENST00000497564 THSD7BQ9C0I4 1608 aa16.81■□□□□ 0.28
VPS26A-209ENST00000497564 K7ELQ4 463 aaPredicted RBP16.8■□□□□ 0.28
VPS26A-209ENST00000497564 CRKP46108 304 aa16.8■□□□□ 0.28
VPS26A-209ENST00000497564 RBM5P52756 815 aaKnown RBP eCLIP16.8■□□□□ 0.28
VPS26A-209ENST00000497564 HAND2P61296 217 aa16.8■□□□□ 0.28
VPS26A-209ENST00000497564 ARPP21Q9UBL0 812 aaPredicted RBP16.8■□□□□ 0.28
VPS26A-209ENST00000497564 SIPA1L1O43166 1804 aa16.8■□□□□ 0.28
VPS26A-209ENST00000497564 WDR19Q8NEZ3 1342 aa16.79■□□□□ 0.28
VPS26A-209ENST00000497564 PCP11498 1178 aaKnown RBP16.79■□□□□ 0.28
VPS26A-209ENST00000497564 APOBEC3HQ6NTF7 200 aaKnown RBP16.79■□□□□ 0.28
VPS26A-209ENST00000497564 TBC1D10CQ8IV04 446 aa16.79■□□□□ 0.28
VPS26A-209ENST00000497564 TEX11Q8IYF3 940 aa16.79■□□□□ 0.28
VPS26A-209ENST00000497564 C2orf69Q8N8R5 385 aa16.79■□□□□ 0.28
VPS26A-209ENST00000497564 STAG1Q8WVM7 1258 aa16.79■□□□□ 0.28
VPS26A-209ENST00000497564 PDRG1Q9NUG6 133 aa16.79■□□□□ 0.28
VPS26A-209ENST00000497564 DAXXQ9UER7 740 aaPredicted RBP16.79■□□□□ 0.28
VPS26A-209ENST00000497564 FZD1Q9UP38 647 aa16.79■□□□□ 0.28
VPS26A-209ENST00000497564 ROBO3Q96MS0 1386 aa16.78■□□□□ 0.28
VPS26A-209ENST00000497564 FOXN1O15353 648 aa16.78■□□□□ 0.28
VPS26A-209ENST00000497564 USP5P45974 858 aa16.78■□□□□ 0.28
VPS26A-209ENST00000497564 EXOSC10Q01780 885 aaKnown RBP16.78■□□□□ 0.28
VPS26A-209ENST00000497564 PPARAQ07869 468 aa16.78■□□□□ 0.28
VPS26A-209ENST00000497564 CTR9Q6PD62 1173 aa16.78■□□□□ 0.28
VPS26A-209ENST00000497564 DHX32Q7L7V1 743 aaKnown RBP16.78■□□□□ 0.28
VPS26A-209ENST00000497564 APOBEC3FQ8IUX4 373 aaKnown RBP16.78■□□□□ 0.28
VPS26A-209ENST00000497564 MB21D2Q8IYB1 491 aaPredicted RBP16.78■□□□□ 0.28
VPS26A-209ENST00000497564 FBXL16Q8N461 479 aa16.78■□□□□ 0.28
VPS26A-209ENST00000497564 NCOA7Q8NI08 942 aa16.78■□□□□ 0.28
VPS26A-209ENST00000497564 HHIPL1Q96JK4 782 aa16.78■□□□□ 0.28
VPS26A-209ENST00000497564 VEZTQ9HBM0 779 aa16.78■□□□□ 0.28
VPS26A-209ENST00000497564 WBP1LQ9NX94 342 aa16.78■□□□□ 0.28
VPS26A-209ENST00000497564 FAM155AB1AL88 458 aaPredicted RBP16.77■□□□□ 0.28
VPS26A-209ENST00000497564 NPM3O75607 178 aaKnown RBP16.77■□□□□ 0.28
VPS26A-209ENST00000497564 FGRP09769 529 aa16.77■□□□□ 0.28
VPS26A-209ENST00000497564 CPA1P15085 419 aa16.77■□□□□ 0.28
VPS26A-209ENST00000497564 ECE1P42892 770 aa16.77■□□□□ 0.28
VPS26A-209ENST00000497564 NT5C2P49902 561 aa16.77■□□□□ 0.28
VPS26A-209ENST00000497564 AK2P54819 239 aa16.77■□□□□ 0.28
VPS26A-209ENST00000497564 ANKRD1Q15327 319 aa16.77■□□□□ 0.28
VPS26A-209ENST00000497564 AKNAD1Q5T1N1 836 aa16.77■□□□□ 0.28
VPS26A-209ENST00000497564 DEFB129Q9H1M3 183 aa16.77■□□□□ 0.28
VPS26A-209ENST00000497564 RNF41Q9H4P4 317 aaPredicted RBP16.77■□□□□ 0.28
VPS26A-209ENST00000497564 TDRD3Q9H7E2 651 aaKnown RBP16.77■□□□□ 0.28
VPS26A-209ENST00000497564 CNNM2Q9H8M5 875 aa16.77■□□□□ 0.28
VPS26A-209ENST00000497564 PAPPA2Q9BXP8 1791 aa16.77■□□□□ 0.27
VPS26A-209ENST00000497564 SSC5DA1L4H1 1573 aa16.77■□□□□ 0.27
VPS26A-209ENST00000497564 FLT1P17948 1338 aa16.76■□□□□ 0.27
VPS26A-209ENST00000497564 USP17L12C9JPN9 530 aa16.76■□□□□ 0.27
VPS26A-209ENST00000497564 USP17L21D6R901 530 aa16.76■□□□□ 0.27
VPS26A-209ENST00000497564 UBE2Q2LH0YL09 131 aa16.76■□□□□ 0.27
VPS26A-209ENST00000497564 TRDNQ13061 729 aa16.76■□□□□ 0.27
VPS26A-209ENST00000497564 PRKG1Q13976 671 aa16.76■□□□□ 0.27
VPS26A-209ENST00000497564 COL9A3Q14050 684 aaPredicted RBP16.76■□□□□ 0.27
VPS26A-209ENST00000497564 SPDYE2Q495Y8 402 aa16.76■□□□□ 0.27
VPS26A-209ENST00000497564 CDC42EP5Q6NZY7 148 aa16.76■□□□□ 0.27
VPS26A-209ENST00000497564 RALYLQ86SE5 291 aaKnown RBP16.76■□□□□ 0.27
VPS26A-209ENST00000497564 CDAN1Q8IWY9 1227 aa16.76■□□□□ 0.27
VPS26A-209ENST00000497564 TGFBRAP1Q8WUH2 860 aa16.76■□□□□ 0.27
VPS26A-209ENST00000497564 AGXT2Q9BYV1 514 aa16.76■□□□□ 0.27
VPS26A-209ENST00000497564 KRT23Q9C075 422 aa16.76■□□□□ 0.27
VPS26A-209ENST00000497564 ZNF70Q9UC06 446 aaPredicted RBP16.76■□□□□ 0.27
VPS26A-209ENST00000497564 COL2A1P02458 1487 aaPredicted RBP16.75■□□□□ 0.27
VPS26A-209ENST00000497564 MINDY4BA8MYZ0 360 aa16.75■□□□□ 0.27
VPS26A-209ENST00000497564 WDHD1O75717 1129 aaPredicted RBP16.75■□□□□ 0.27
VPS26A-209ENST00000497564 MCM5P33992 734 aa16.75■□□□□ 0.27
VPS26A-209ENST00000497564 CTDSPL2Q05D32 466 aa16.75■□□□□ 0.27
VPS26A-209ENST00000497564 COL13A1Q5TAT6 717 aaPredicted RBP16.75■□□□□ 0.27
VPS26A-209ENST00000497564 C12orf60Q5U649 245 aa16.75■□□□□ 0.27
VPS26A-209ENST00000497564 RGMBQ6NW40 437 aa16.75■□□□□ 0.27
VPS26A-209ENST00000497564 MFSD6Q6ZSS7 791 aa16.75■□□□□ 0.27
VPS26A-209ENST00000497564 AMOTL1Q8IY63 956 aa16.75■□□□□ 0.27
VPS26A-209ENST00000497564 USP40Q9NVE5 1235 aa16.75■□□□□ 0.27
VPS26A-209ENST00000497564 MCM9Q9NXL9 1143 aa16.75■□□□□ 0.27
VPS26A-209ENST00000497564 GREB1LQ9C091 1923 aaPredicted RBP16.74■□□□□ 0.27
VPS26A-209ENST00000497564 NEDD4P46934 1319 aa16.74■□□□□ 0.27
VPS26A-209ENST00000497564 MYO1BO43795 1136 aa16.74■□□□□ 0.27
VPS26A-209ENST00000497564 SLC3A2P08195 630 aaKnown RBP16.74■□□□□ 0.27
VPS26A-209ENST00000497564 SLC4A3P48751 1232 aa16.74■□□□□ 0.27
VPS26A-209ENST00000497564 ZNF157P51786 506 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms