RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 BEGAINQ9BUH8 593 aa13.87□□□□□ -0.19
HLA-B-254ENST00000497377 DHX36Q9H2U1 1008 aaKnown RBP13.87□□□□□ -0.19
HLA-B-254ENST00000497377 DDX4Q9NQI0 724 aaKnown RBP13.87□□□□□ -0.19
HLA-B-254ENST00000497377 WBP1LQ9NX94 342 aa13.87□□□□□ -0.19
HLA-B-254ENST00000497377 CSADQ9Y600 493 aa13.87□□□□□ -0.19
HLA-B-254ENST00000497377 OTOFQ9HC10 1997 aa13.87□□□□□ -0.19
HLA-B-254ENST00000497377 CDK5RAP2Q96SN8 1893 aa13.87□□□□□ -0.19
HLA-B-254ENST00000497377 CA12O43570 354 aa13.86□□□□□ -0.19
HLA-B-254ENST00000497377 IGHDP01880 384 aa13.86□□□□□ -0.19
HLA-B-254ENST00000497377 HSPA1AP0DMV8 641 aaKnown RBP13.86□□□□□ -0.19
HLA-B-254ENST00000497377 HSPA1BP0DMV9 641 aaKnown RBP13.86□□□□□ -0.19
HLA-B-254ENST00000497377 ZBTB48P10074 688 aaPredicted RBP13.86□□□□□ -0.19
HLA-B-254ENST00000497377 ADD2P35612 726 aa13.86□□□□□ -0.19
HLA-B-254ENST00000497377 IRX6P78412 446 aaPredicted RBP13.86□□□□□ -0.19
HLA-B-254ENST00000497377 MAP3K10Q02779 954 aa13.86□□□□□ -0.19
HLA-B-254ENST00000497377 UBE3CQ15386 1083 aa13.86□□□□□ -0.19
HLA-B-254ENST00000497377 LRRFIP1Q32MZ4 808 aaKnown RBP13.86□□□□□ -0.19
HLA-B-254ENST00000497377 ZFPM1Q8IX07 1006 aa13.86□□□□□ -0.19
HLA-B-254ENST00000497377 EDC3Q96F86 508 aaKnown RBP13.86□□□□□ -0.19
HLA-B-254ENST00000497377 OSBPL5Q9H0X9 879 aaPredicted RBP13.86□□□□□ -0.19
HLA-B-254ENST00000497377 STAP2Q9UGK3 403 aa13.86□□□□□ -0.19
HLA-B-254ENST00000497377 FZD1Q9UP38 647 aa13.86□□□□□ -0.19
HLA-B-254ENST00000497377 SALL3Q9BXA9 1300 aa13.86□□□□□ -0.19
HLA-B-254ENST00000497377 ZNF532Q9HCE3 1301 aa13.86□□□□□ -0.19
HLA-B-254ENST00000497377 MAGEB6P1A0A0J9YX57 407 aa13.85□□□□□ -0.19
HLA-B-254ENST00000497377 TCRBV5S4A2TA0A5A2 114 aa13.85□□□□□ -0.19
HLA-B-254ENST00000497377 TBC1D12O60347 775 aa13.85□□□□□ -0.19
HLA-B-254ENST00000497377 ZFYP08048 801 aaPredicted RBP13.85□□□□□ -0.19
HLA-B-254ENST00000497377 KIF23Q02241 960 aaPredicted RBP13.85□□□□□ -0.19
HLA-B-254ENST00000497377 NUCB1Q02818 461 aa13.85□□□□□ -0.19
HLA-B-254ENST00000497377 SPRYD7Q5W111 196 aa13.85□□□□□ -0.19
HLA-B-254ENST00000497377 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.85□□□□□ -0.19
HLA-B-254ENST00000497377 SH3BP5LQ7L8J4 393 aa13.85□□□□□ -0.19
HLA-B-254ENST00000497377 CHD1LQ86WJ1 897 aa13.85□□□□□ -0.19
HLA-B-254ENST00000497377 KBTBD3Q8NAB2 608 aa13.85□□□□□ -0.19
HLA-B-254ENST00000497377 MIGA1Q8NAN2 632 aa13.85□□□□□ -0.19
HLA-B-254ENST00000497377 PI4K2BQ8TCG2 481 aa13.85□□□□□ -0.19
HLA-B-254ENST00000497377 TGFBRAP1Q8WUH2 860 aa13.85□□□□□ -0.19
HLA-B-254ENST00000497377 WRNIP1Q96S55 665 aa13.85□□□□□ -0.19
HLA-B-254ENST00000497377 ZNF112Q9UJU3 913 aa13.85□□□□□ -0.19
HLA-B-254ENST00000497377 LAMB1P07942 1786 aa13.85□□□□□ -0.19
HLA-B-254ENST00000497377 DDTLA6NHG4 134 aaPredicted RBP13.84□□□□□ -0.19
HLA-B-254ENST00000497377 INHBEP58166 350 aa13.84□□□□□ -0.19
HLA-B-254ENST00000497377 DYNLL1P63167 89 aaKnown RBP13.84□□□□□ -0.19
HLA-B-254ENST00000497377 SREBF2Q12772 1141 aa13.84□□□□□ -0.19
HLA-B-254ENST00000497377 VGLL4Q14135 290 aa13.84□□□□□ -0.19
HLA-B-254ENST00000497377 TSHZ3Q63HK5 1081 aa13.84□□□□□ -0.19
HLA-B-254ENST00000497377 MIGA2Q7L4E1 593 aa13.84□□□□□ -0.19
HLA-B-254ENST00000497377 OTUD7AQ8TE49 926 aaPredicted RBP13.84□□□□□ -0.19
HLA-B-254ENST00000497377 WNK4Q96J92 1243 aa13.84□□□□□ -0.19
HLA-B-254ENST00000497377 CLMNQ96JQ2 1002 aa13.84□□□□□ -0.19
HLA-B-254ENST00000497377 RIOK1Q9BRS2 568 aaKnown RBP13.84□□□□□ -0.19
HLA-B-254ENST00000497377 CRNKL1Q9BZJ0 848 aaKnown RBP13.84□□□□□ -0.19
HLA-B-254ENST00000497377 LNPKQ9C0E8 428 aa13.84□□□□□ -0.19
HLA-B-254ENST00000497377 PI4KBQ9UBF8 816 aa13.84□□□□□ -0.19
HLA-B-254ENST00000497377 FLT1P17948 1338 aa13.84□□□□□ -0.19
HLA-B-254ENST00000497377 MANSC4A6NHS7 340 aaPredicted RBP13.83□□□□□ -0.2
HLA-B-254ENST00000497377 USP5P45974 858 aa13.83□□□□□ -0.2
HLA-B-254ENST00000497377 PDE1AP54750 535 aa13.83□□□□□ -0.2
HLA-B-254ENST00000497377 ERO1BQ86YB8 467 aa13.83□□□□□ -0.2
HLA-B-254ENST00000497377 HERC5Q9UII4 1024 aaKnown RBP13.83□□□□□ -0.2
HLA-B-254ENST00000497377 MYH1P12882 1939 aa13.82□□□□□ -0.2
HLA-B-254ENST00000497377 SPDYE5A6NIY4 337 aa13.82□□□□□ -0.2
HLA-B-254ENST00000497377 HLA-DOAP06340 250 aa13.82□□□□□ -0.2
HLA-B-254ENST00000497377 TM4SF4P48230 202 aa13.82□□□□□ -0.2
HLA-B-254ENST00000497377 CTCFP49711 727 aaPredicted RBP13.82□□□□□ -0.2
HLA-B-254ENST00000497377 NOL9Q5SY16 702 aaKnown RBP13.82□□□□□ -0.2
HLA-B-254ENST00000497377 B4GALNT3Q6L9W6 998 aa13.82□□□□□ -0.2
HLA-B-254ENST00000497377 TICAM2Q86XR7 235 aa13.82□□□□□ -0.2
HLA-B-254ENST00000497377 FOXP4Q8IVH2 680 aaPredicted RBP13.82□□□□□ -0.2
HLA-B-254ENST00000497377 MAPKAPK5Q8IW41 473 aa13.82□□□□□ -0.2
HLA-B-254ENST00000497377 OPTNQ96CV9 577 aa13.82□□□□□ -0.2
HLA-B-254ENST00000497377 ZIC5Q96T25 663 aa13.82□□□□□ -0.2
HLA-B-254ENST00000497377 ELP3Q9H9T3 547 aa13.82□□□□□ -0.2
HLA-B-254ENST00000497377 SAGE1Q9NXZ1 904 aa13.82□□□□□ -0.2
HLA-B-254ENST00000497377 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.82□□□□□ -0.2
HLA-B-254ENST00000497377 SNCAIPQ9Y6H5 919 aa13.82□□□□□ -0.2
HLA-B-254ENST00000497377 PHF20L1A8MW92 1017 aa13.81□□□□□ -0.2
HLA-B-254ENST00000497377 FOXN1O15353 648 aa13.81□□□□□ -0.2
HLA-B-254ENST00000497377 CTNND1O60716 968 aaKnown RBP13.81□□□□□ -0.2
HLA-B-254ENST00000497377 INPP5BP32019 993 aa13.81□□□□□ -0.2
HLA-B-254ENST00000497377 METTL16Q86W50 562 aaKnown RBP13.81□□□□□ -0.2
HLA-B-254ENST00000497377 ZKSCAN4Q969J2 545 aaPredicted RBP13.81□□□□□ -0.2
HLA-B-254ENST00000497377 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.81□□□□□ -0.2
HLA-B-254ENST00000497377 TAOK2Q9UL54 1235 aa13.81□□□□□ -0.2
HLA-B-254ENST00000497377 RNF113AO15541 343 aaKnown RBP13.8□□□□□ -0.2
HLA-B-254ENST00000497377 MBD4O95243 580 aa13.8□□□□□ -0.2
HLA-B-254ENST00000497377 PPATQ06203 517 aa13.8□□□□□ -0.2
HLA-B-254ENST00000497377 LCE2DQ5TA82 110 aaPredicted RBP13.8□□□□□ -0.2
HLA-B-254ENST00000497377 TTC6Q86TZ1 520 aa13.8□□□□□ -0.2
HLA-B-254ENST00000497377 APPBP2Q92624 585 aa13.8□□□□□ -0.2
HLA-B-254ENST00000497377 EVI5LQ96CN4 794 aa13.8□□□□□ -0.2
HLA-B-254ENST00000497377 DDRGK1Q96HY6 314 aa13.8□□□□□ -0.2
HLA-B-254ENST00000497377 TRIM34Q9BYJ4 488 aa13.8□□□□□ -0.2
HLA-B-254ENST00000497377 OSBPL3Q9H4L5 887 aa13.8□□□□□ -0.2
HLA-B-254ENST00000497377 ATP8A2Q9NTI2 1148 aa13.8□□□□□ -0.2
HLA-B-254ENST00000497377 PALD1Q9ULE6 856 aa13.8□□□□□ -0.2
HLA-B-254ENST00000497377 NAV1Q8NEY1 1877 aa13.8□□□□□ -0.2
HLA-B-254ENST00000497377 DOCK1Q14185 1865 aa13.79□□□□□ -0.2
HLA-B-254ENST00000497377 ALDH1A1P00352 501 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms