RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 RING1Q06587 406 aa6.49□□□□□ -1.37
SMC4-225ENST00000497203 LRFN4Q6PJG9 635 aa6.49□□□□□ -1.37
SMC4-225ENST00000497203 SMYD4Q8IYR2 804 aaPredicted RBP6.49□□□□□ -1.37
SMC4-225ENST00000497203 RNF214Q8ND24 703 aa6.49□□□□□ -1.37
SMC4-225ENST00000497203 PHC3Q8NDX5 983 aa6.49□□□□□ -1.37
SMC4-225ENST00000497203 ISL2Q96A47 359 aa6.49□□□□□ -1.37
SMC4-225ENST00000497203 TBC1D32Q96NH3 1257 aa6.49□□□□□ -1.37
SMC4-225ENST00000497203 PCMTD2Q9NV79 361 aa6.49□□□□□ -1.37
SMC4-225ENST00000497203 FAM170BA6NMN3 283 aa6.48□□□□□ -1.37
SMC4-225ENST00000497203 CD97P48960 835 aa6.48□□□□□ -1.37
SMC4-225ENST00000497203 UBE3DQ7Z6J8 389 aa6.48□□□□□ -1.37
SMC4-225ENST00000497203 ZAR1Q86SH2 424 aa6.48□□□□□ -1.37
SMC4-225ENST00000497203 ELMO3Q96BJ8 720 aa6.48□□□□□ -1.37
SMC4-225ENST00000497203 PLPPR2Q96GM1 343 aa6.48□□□□□ -1.37
SMC4-225ENST00000497203 RLBP1P12271 317 aa6.47□□□□□ -1.37
SMC4-225ENST00000497203 LMNB1P20700 586 aa6.47□□□□□ -1.37
SMC4-225ENST00000497203 CDK5R2Q13319 367 aa6.47□□□□□ -1.37
SMC4-225ENST00000497203 WIPI1Q5MNZ9 446 aaPredicted RBP6.47□□□□□ -1.37
SMC4-225ENST00000497203 LDLRAD1Q5T700 205 aa6.47□□□□□ -1.37
SMC4-225ENST00000497203 ZBTB37Q5TC79 503 aa6.47□□□□□ -1.37
SMC4-225ENST00000497203 MIR1-1HGQ9H1L0 117 aa6.47□□□□□ -1.37
SMC4-225ENST00000497203 MED26O95402 600 aa6.46□□□□□ -1.38
SMC4-225ENST00000497203 CYFIP1Q7L576 1253 aa6.46□□□□□ -1.38
SMC4-225ENST00000497203 RNF34Q969K3 372 aa6.46□□□□□ -1.38
SMC4-225ENST00000497203 OSBPL1AQ9BXW6 950 aa6.46□□□□□ -1.38
SMC4-225ENST00000497203 COPRSQ9NQ92 184 aa6.46□□□□□ -1.38
SMC4-225ENST00000497203 PICK1Q9NRD5 415 aa6.46□□□□□ -1.38
SMC4-225ENST00000497203 ATG3Q9NT62 314 aa6.46□□□□□ -1.38
SMC4-225ENST00000497203 PCOLCE2Q9UKZ9 415 aa6.46□□□□□ -1.38
SMC4-225ENST00000497203 PRAMEF27A3QJZ7 478 aa6.45□□□□□ -1.38
SMC4-225ENST00000497203 FANCGO15287 622 aa6.45□□□□□ -1.38
SMC4-225ENST00000497203 PF4P02776 101 aa6.45□□□□□ -1.38
SMC4-225ENST00000497203 SSTR4P31391 388 aa6.45□□□□□ -1.38
SMC4-225ENST00000497203 GBP2P32456 591 aaPredicted RBP6.45□□□□□ -1.38
SMC4-225ENST00000497203 ZNF76P36508 570 aa6.45□□□□□ -1.38
SMC4-225ENST00000497203 CAMK2GQ13555 558 aaPredicted RBP6.45□□□□□ -1.38
SMC4-225ENST00000497203 BNC2Q6ZN30 1099 aaPredicted RBP6.45□□□□□ -1.38
SMC4-225ENST00000497203 ZNF765Q7L2R6 523 aa6.45□□□□□ -1.38
SMC4-225ENST00000497203 ERMP1Q7Z2K6 904 aa6.45□□□□□ -1.38
SMC4-225ENST00000497203 HDXQ7Z353 690 aa6.45□□□□□ -1.38
SMC4-225ENST00000497203 RELL1Q8IUW5 271 aa6.45□□□□□ -1.38
SMC4-225ENST00000497203 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.45□□□□□ -1.38
SMC4-225ENST00000497203 JARID2Q92833 1246 aaPredicted RBP6.45□□□□□ -1.38
SMC4-225ENST00000497203 RHOVQ96L33 236 aa6.45□□□□□ -1.38
SMC4-225ENST00000497203 TMEM74Q96NL1 305 aa6.45□□□□□ -1.38
SMC4-225ENST00000497203 RSRP1Q9BUV0 290 aa6.45□□□□□ -1.38
SMC4-225ENST00000497203 SSU72Q9NP77 194 aaKnown RBP6.45□□□□□ -1.38
SMC4-225ENST00000497203 KBTBD4Q9NVX7 518 aa6.45□□□□□ -1.38
SMC4-225ENST00000497203 SNCAIPQ9Y6H5 919 aa6.45□□□□□ -1.38
SMC4-225ENST00000497203 KIAA1324LA8MWY0 1029 aaPredicted RBP6.44□□□□□ -1.38
SMC4-225ENST00000497203 MINDY4BA8MYZ0 360 aa6.44□□□□□ -1.38
SMC4-225ENST00000497203 GFRA2O00451 464 aa6.44□□□□□ -1.38
SMC4-225ENST00000497203 ERCC5P28715 1186 aaPredicted RBP6.44□□□□□ -1.38
SMC4-225ENST00000497203 HOXA10P31260 410 aaPredicted RBP6.44□□□□□ -1.38
SMC4-225ENST00000497203 IRAK1P51617 712 aa6.44□□□□□ -1.38
SMC4-225ENST00000497203 HDLBPQ00341 1268 aaKnown RBP6.44□□□□□ -1.38
SMC4-225ENST00000497203 LMNB2Q03252 620 aa6.44□□□□□ -1.38
SMC4-225ENST00000497203 GIMAP7Q8NHV1 300 aa6.44□□□□□ -1.38
SMC4-225ENST00000497203 C8orf37Q96NL8 207 aa6.44□□□□□ -1.38
SMC4-225ENST00000497203 PIM2Q9P1W9 311 aa6.44□□□□□ -1.38
SMC4-225ENST00000497203 LEMD3Q9Y2U8 911 aa6.44□□□□□ -1.38
SMC4-225ENST00000497203 LEFTY1O75610 366 aa6.43□□□□□ -1.38
SMC4-225ENST00000497203 FAM87AP0C7U9 286 aa6.43□□□□□ -1.38
SMC4-225ENST00000497203 ZC3H6P61129 1189 aaKnown RBP6.43□□□□□ -1.38
SMC4-225ENST00000497203 FANCCQ00597 558 aa6.43□□□□□ -1.38
SMC4-225ENST00000497203 FAM160A1Q05DH4 1040 aa6.43□□□□□ -1.38
SMC4-225ENST00000497203 OGFOD3Q6PK18 319 aa6.43□□□□□ -1.38
SMC4-225ENST00000497203 METTL22Q9BUU2 404 aaPredicted RBP6.43□□□□□ -1.38
SMC4-225ENST00000497203 WNT10AQ9GZT5 417 aa6.43□□□□□ -1.38
SMC4-225ENST00000497203 FBRSQ9HAH7 460 aa6.43□□□□□ -1.38
SMC4-225ENST00000497203 FAM221AA4D161 298 aa6.42□□□□□ -1.38
SMC4-225ENST00000497203 F13A1P00488 732 aa6.42□□□□□ -1.38
SMC4-225ENST00000497203 FOSL1P15407 271 aa6.42□□□□□ -1.38
SMC4-225ENST00000497203 GARTP22102 1010 aa6.42□□□□□ -1.38
SMC4-225ENST00000497203 RPL6Q02878 288 aaKnown RBP6.42□□□□□ -1.38
SMC4-225ENST00000497203 PWP1Q13610 501 aa6.42□□□□□ -1.38
SMC4-225ENST00000497203 CPSF6Q16630 551 aaKnown RBP eCLIP6.42□□□□□ -1.38
SMC4-225ENST00000497203 DUSP27Q5VZP5 1158 aa6.42□□□□□ -1.38
SMC4-225ENST00000497203 CDC37L1Q7L3B6 337 aa6.42□□□□□ -1.38
SMC4-225ENST00000497203 CCDC84Q86UT8 332 aaPredicted RBP6.42□□□□□ -1.38
SMC4-225ENST00000497203 ZNF507Q8TCN5 953 aa6.42□□□□□ -1.38
SMC4-225ENST00000497203 DUSP23Q9BVJ7 150 aa6.42□□□□□ -1.38
SMC4-225ENST00000497203 GGT7Q9UJ14 662 aa6.42□□□□□ -1.38
SMC4-225ENST00000497203 CILPO75339 1184 aa6.41□□□□□ -1.38
SMC4-225ENST00000497203 GRK4P32298 578 aa6.41□□□□□ -1.38
SMC4-225ENST00000497203 GRIK1P39086 918 aa6.41□□□□□ -1.38
SMC4-225ENST00000497203 ETF1P62495 437 aaKnown RBP6.41□□□□□ -1.38
SMC4-225ENST00000497203 CYP27A1Q02318 531 aa6.41□□□□□ -1.38
SMC4-225ENST00000497203 NKG7Q16617 165 aa6.41□□□□□ -1.38
SMC4-225ENST00000497203 INTS5Q6P9B9 1019 aaKnown RBP6.41□□□□□ -1.38
SMC4-225ENST00000497203 HS2ST1Q7LGA3 356 aa6.41□□□□□ -1.38
SMC4-225ENST00000497203 METTL16Q86W50 562 aaKnown RBP6.41□□□□□ -1.38
SMC4-225ENST00000497203 NT5DC4Q86YG4 428 aa6.41□□□□□ -1.38
SMC4-225ENST00000497203 TOP6BLQ8N6T0 577 aa6.41□□□□□ -1.38
SMC4-225ENST00000497203 LRRC4CQ9HCJ2 640 aa6.41□□□□□ -1.38
SMC4-225ENST00000497203 OAS3Q9Y6K5 1087 aaKnown RBP6.41□□□□□ -1.38
SMC4-225ENST00000497203 CYP26A1O43174 497 aa6.4□□□□□ -1.38
SMC4-225ENST00000497203 TAL1P17542 331 aaPredicted RBP6.4□□□□□ -1.38
SMC4-225ENST00000497203 SPINK2P20155 84 aa6.4□□□□□ -1.38
SMC4-225ENST00000497203 SLBPQ14493 270 aaKnown RBP eCLIP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms