RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 TTC6Q86TZ1 520 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 LRRTM3Q86VH5 581 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 CCNJLQ8IV13 435 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 CCDC116Q8IYX3 515 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 EHBP1Q8NDI1 1231 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 ATL2Q8NHH9 583 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 RHBDD1Q8TEB9 315 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 KIF2CQ99661 725 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 SMAD5Q99717 465 aaKnown RBP2.44□□□□□ -2.02
UBR4-217ENST00000497018 RUSC1Q9BVN2 902 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 SARGQ9BW04 601 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 MRPL4Q9BYD3 311 aaKnown RBP2.44□□□□□ -2.02
UBR4-217ENST00000497018 NIFKQ9BYG3 293 aaKnown RBP2.44□□□□□ -2.02
UBR4-217ENST00000497018 CCDC8Q9H0W5 538 aaPredicted RBP2.44□□□□□ -2.02
UBR4-217ENST00000497018 EHD4Q9H223 541 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 BRMS1Q9HCU9 246 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 INTS7Q9NVH2 962 aaKnown RBP2.44□□□□□ -2.02
UBR4-217ENST00000497018 OBP2AQ9NY56 170 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 ABI2Q9NYB9 513 aaPredicted RBP2.44□□□□□ -2.02
UBR4-217ENST00000497018 ZDHHC3Q9NYG2 299 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 FNDC3AQ9Y2H6 1198 aaKnown RBP2.44□□□□□ -2.02
UBR4-217ENST00000497018 POLR3KQ9Y2Y1 108 aaPredicted RBP2.44□□□□□ -2.02
UBR4-217ENST00000497018 PCDHB5Q9Y5E4 795 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 TLL2Q9Y6L7 1015 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 CHD4Q14839 1912 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 DNMBPQ6XZF7 1577 aa2.44□□□□□ -2.02
UBR4-217ENST00000497018 POGZQ7Z3K3 1410 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 ANO9A1A5B4 782 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 FZD9O00144 591 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 SIAH2O43255 324 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 TIMM44O43615 452 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 SUSD5O60279 629 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 ZNF500O60304 480 aaPredicted RBP2.43□□□□□ -2.02
UBR4-217ENST00000497018 DDAH1O94760 285 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 S1PR4O95977 384 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 CAPNS1P04632 268 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 PGRP06401 933 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 EDN3P14138 238 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 SELPP16109 830 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 LIG1P18858 919 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 PTMSP20962 102 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 NEK3P51956 506 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 ZNF280AP59817 542 aaPredicted RBP2.43□□□□□ -2.02
UBR4-217ENST00000497018 RASSF7Q02833 373 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 TYRO3Q06418 890 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 FAAP100Q0VG06 881 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 NR5A1Q13285 461 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 GBX1Q14549 363 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 STAT4Q14765 748 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 KRT72Q14CN4 511 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 DHCR24Q15392 516 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 PPP2R5EQ16537 467 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 CWF19L2Q2TBE0 894 aaKnown RBP2.43□□□□□ -2.02
UBR4-217ENST00000497018 GFOD2Q3B7J2 385 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 TRIM61Q5EBN2 209 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 WWC2Q6AWC2 1192 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 IL31Q6EBC2 164 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 CXorf57Q6NSI4 855 aaKnown RBP2.43□□□□□ -2.02
UBR4-217ENST00000497018 PKN3Q6P5Z2 889 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 GK5Q6ZS86 529 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 EEPD1Q7L9B9 569 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 BTLAQ7Z6A9 289 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 ZBTB46Q86UZ6 589 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 CBARPQ8N350 705 aaPredicted RBP2.43□□□□□ -2.02
UBR4-217ENST00000497018 TAB3Q8N5C8 712 aaPredicted RBP2.43□□□□□ -2.02
UBR4-217ENST00000497018 PJA1Q8NG27 643 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 RHPN1Q8TCX5 695 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 DDX1Q92499 740 aaKnown RBP2.43□□□□□ -2.02
UBR4-217ENST00000497018 KIFC2Q96AC6 838 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 TIFAQ96CG3 184 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 KCTD12Q96CX2 325 aaKnown RBP2.43□□□□□ -2.02
UBR4-217ENST00000497018 MTMR8Q96EF0 704 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 OTUD5Q96G74 571 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 TRMT2BQ96GJ1 504 aaKnown RBP2.43□□□□□ -2.02
UBR4-217ENST00000497018 FAM163AQ96GL9 167 aaPredicted RBP2.43□□□□□ -2.02
UBR4-217ENST00000497018 STRBPQ96SI9 672 aaKnown RBP2.43□□□□□ -2.02
UBR4-217ENST00000497018 CRBNQ96SW2 442 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 YIPF4Q9BSR8 244 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 PAGR1Q9BTK6 254 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 CEP44Q9C0F1 390 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 PUS7LQ9H0K6 701 aaKnown RBP2.43□□□□□ -2.02
UBR4-217ENST00000497018 PPCSQ9HAB8 311 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 TRIM39Q9HCM9 518 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 TCF7L1Q9HCS4 588 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 NGRNQ9NPE2 291 aaKnown RBP2.43□□□□□ -2.02
UBR4-217ENST00000497018 CRTAC1Q9NQ79 661 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 ARHGEF4Q9NR80 690 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 SLC5A4Q9NY91 659 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 LUZP4Q9P127 313 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 TRHDEQ9UKU6 1024 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 NOB1Q9ULX3 412 aaKnown RBP2.43□□□□□ -2.02
UBR4-217ENST00000497018 AKAP2Q9Y2D5 859 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 PPP2R3BQ9Y5P8 575 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 GRIN2BQ13224 1484 aa2.43□□□□□ -2.02
UBR4-217ENST00000497018 CDK12Q9NYV4 1490 aaPredicted RBP2.43□□□□□ -2.02
UBR4-217ENST00000497018 TNKSO95271 1327 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 LTBP3Q9NS15 1303 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 ASXL2Q76L83 1435 aa2.42□□□□□ -2.02
UBR4-217ENST00000497018 PRG4Q92954 1404 aaPredicted RBP2.42□□□□□ -2.02
UBR4-217ENST00000497018 EPRSP07814 1512 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms