RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 CDX2Q99626 313 aaPredicted RBP12.29□□□□□ -0.44
SRSF4-205ENST00000497015 SLC45A1Q9Y2W3 748 aa12.29□□□□□ -0.44
SRSF4-205ENST00000497015 MAP3K10Q02779 954 aa12.28□□□□□ -0.44
SRSF4-205ENST00000497015 TREML2Q5T2D2 321 aa12.28□□□□□ -0.44
SRSF4-205ENST00000497015 GADL1Q6ZQY3 521 aa12.28□□□□□ -0.44
SRSF4-205ENST00000497015 VGLL2Q8N8G2 317 aa12.28□□□□□ -0.44
SRSF4-205ENST00000497015 TBC1D22AQ8WUA7 517 aa12.28□□□□□ -0.44
SRSF4-205ENST00000497015 HMX1Q9NP08 348 aaPredicted RBP12.28□□□□□ -0.44
SRSF4-205ENST00000497015 TMOD2Q9NZR1 351 aa12.28□□□□□ -0.44
SRSF4-205ENST00000497015 DAGLAQ9Y4D2 1042 aa12.28□□□□□ -0.44
SRSF4-205ENST00000497015 HMGCRP04035 888 aa12.27□□□□□ -0.45
SRSF4-205ENST00000497015 DSG3P32926 999 aa12.27□□□□□ -0.45
SRSF4-205ENST00000497015 DIXDC1Q155Q3 683 aa12.27□□□□□ -0.45
SRSF4-205ENST00000497015 TAF7LQ5H9L4 462 aa12.27□□□□□ -0.45
SRSF4-205ENST00000497015 MAP3K21Q5TCX8 1036 aa12.27□□□□□ -0.45
SRSF4-205ENST00000497015 SCYL3Q8IZE3 742 aa12.27□□□□□ -0.45
SRSF4-205ENST00000497015 TRIB2Q92519 343 aa12.27□□□□□ -0.45
SRSF4-205ENST00000497015 COA7Q96BR5 231 aa12.27□□□□□ -0.45
SRSF4-205ENST00000497015 SEMA6BQ9H3T3 888 aa12.27□□□□□ -0.45
SRSF4-205ENST00000497015 DDX60LQ5H9U9 1706 aaKnown RBP12.27□□□□□ -0.45
SRSF4-205ENST00000497015 DNAH12Q6ZR08 3092 aa12.27□□□□□ -0.45
SRSF4-205ENST00000497015 PEX10O60683 326 aa12.26□□□□□ -0.45
SRSF4-205ENST00000497015 LHX8Q68G74 356 aa12.26□□□□□ -0.45
SRSF4-205ENST00000497015 MRPL50Q8N5N7 158 aaKnown RBP12.26□□□□□ -0.45
SRSF4-205ENST00000497015 SUCLG2Q96I99 432 aa12.26□□□□□ -0.45
SRSF4-205ENST00000497015 SUGT1Q9Y2Z0 365 aa12.26□□□□□ -0.45
SRSF4-205ENST00000497015 TRIM75PA6NK02 468 aa12.25□□□□□ -0.45
SRSF4-205ENST00000497015 GRM8O00222 908 aa12.25□□□□□ -0.45
SRSF4-205ENST00000497015 FAM110CQ1W6H9 321 aa12.25□□□□□ -0.45
SRSF4-205ENST00000497015 VPS37DQ86XT2 251 aa12.25□□□□□ -0.45
SRSF4-205ENST00000497015 MAFAQ8NHW3 353 aaPredicted RBP12.25□□□□□ -0.45
SRSF4-205ENST00000497015 SMCR8Q8TEV9 937 aaPredicted RBP12.25□□□□□ -0.45
SRSF4-205ENST00000497015 SSH1Q8WYL5 1049 aa12.25□□□□□ -0.45
SRSF4-205ENST00000497015 TTYH1Q9H313 450 aaPredicted RBP12.25□□□□□ -0.45
SRSF4-205ENST00000497015 USP40Q9NVE5 1235 aa12.25□□□□□ -0.45
SRSF4-205ENST00000497015 DDTLA6NHG4 134 aaPredicted RBP12.24□□□□□ -0.45
SRSF4-205ENST00000497015 FRAT2O75474 233 aaPredicted RBP12.24□□□□□ -0.45
SRSF4-205ENST00000497015 ALDH1L1O75891 902 aa12.24□□□□□ -0.45
SRSF4-205ENST00000497015 PDE8BO95263 885 aa12.24□□□□□ -0.45
SRSF4-205ENST00000497015 FGFR2P21802 821 aa12.24□□□□□ -0.45
SRSF4-205ENST00000497015 MROH5Q6ZUA9 1318 aa12.24□□□□□ -0.45
SRSF4-205ENST00000497015 MYLIPQ8WY64 445 aa12.24□□□□□ -0.45
SRSF4-205ENST00000497015 KIF16BQ96L93 1317 aa12.24□□□□□ -0.45
SRSF4-205ENST00000497015 CDH23Q9H251 3354 aa12.24□□□□□ -0.45
SRSF4-205ENST00000497015 AGTPBP1Q9UPW5 1226 aa12.24□□□□□ -0.45
SRSF4-205ENST00000497015 PLXNB2O15031 1838 aa12.23□□□□□ -0.45
SRSF4-205ENST00000497015 NBPF7P0C2Y1 421 aaPredicted RBP12.23□□□□□ -0.45
SRSF4-205ENST00000497015 CYP2B6P20813 491 aa12.23□□□□□ -0.45
SRSF4-205ENST00000497015 PRDX5P30044 214 aa12.23□□□□□ -0.45
SRSF4-205ENST00000497015 CACNB2Q08289 660 aaPredicted RBP12.23□□□□□ -0.45
SRSF4-205ENST00000497015 RRP1BQ14684 758 aaKnown RBP12.23□□□□□ -0.45
SRSF4-205ENST00000497015 SHHQ15465 462 aa12.23□□□□□ -0.45
SRSF4-205ENST00000497015 CAVIN4Q5BKX8 364 aa12.23□□□□□ -0.45
SRSF4-205ENST00000497015 POTEEQ6S8J3 1075 aa12.23□□□□□ -0.45
SRSF4-205ENST00000497015 KLHDC4Q8TBB5 520 aa12.23□□□□□ -0.45
SRSF4-205ENST00000497015 ARHGAP45Q92619 1136 aa12.23□□□□□ -0.45
SRSF4-205ENST00000497015 SMC4Q9NTJ3 1288 aa12.23□□□□□ -0.45
SRSF4-205ENST00000497015 CTNND1O60716 968 aaKnown RBP12.22□□□□□ -0.45
SRSF4-205ENST00000497015 PRKAR2AP13861 404 aaKnown RBP12.22□□□□□ -0.45
SRSF4-205ENST00000497015 CCND3P30281 292 aaPredicted RBP12.22□□□□□ -0.45
SRSF4-205ENST00000497015 RARSP54136 660 aaKnown RBP12.22□□□□□ -0.45
SRSF4-205ENST00000497015 C9orf50Q5SZB4 431 aa12.22□□□□□ -0.45
SRSF4-205ENST00000497015 ZNF697Q5TEC3 545 aa12.22□□□□□ -0.45
SRSF4-205ENST00000497015 DDX4Q9NQI0 724 aaKnown RBP12.22□□□□□ -0.45
SRSF4-205ENST00000497015 PICK1Q9NRD5 415 aa12.22□□□□□ -0.45
SRSF4-205ENST00000497015 PHIPQ8WWQ0 1821 aa12.22□□□□□ -0.45
SRSF4-205ENST00000497015 MAST3O60307 1309 aa12.21□□□□□ -0.45
SRSF4-205ENST00000497015 RGS3P49796 1198 aa12.21□□□□□ -0.45
SRSF4-205ENST00000497015 CCL14Q16627 93 aa12.21□□□□□ -0.45
SRSF4-205ENST00000497015 METTL24Q5JXM2 366 aa12.21□□□□□ -0.45
SRSF4-205ENST00000497015 ANKRD44Q8N8A2 993 aa12.21□□□□□ -0.45
SRSF4-205ENST00000497015 USP38Q8NB14 1042 aa12.21□□□□□ -0.45
SRSF4-205ENST00000497015 USP6NLQ92738 828 aa12.21□□□□□ -0.45
SRSF4-205ENST00000497015 IDI2Q9BXS1 227 aa12.21□□□□□ -0.45
SRSF4-205ENST00000497015 SRCIN1Q9C0H9 1055 aa12.21□□□□□ -0.45
SRSF4-205ENST00000497015 ASCC2Q9H1I8 757 aaPredicted RBP12.21□□□□□ -0.45
SRSF4-205ENST00000497015 PTPRFP10586 1907 aa12.2□□□□□ -0.46
SRSF4-205ENST00000497015 SPP2Q13103 211 aa12.2□□□□□ -0.46
SRSF4-205ENST00000497015 Q3C1V9 767 aa12.2□□□□□ -0.46
SRSF4-205ENST00000497015 RABL6Q3YEC7 729 aaPredicted RBP12.2□□□□□ -0.46
SRSF4-205ENST00000497015 API5Q9BZZ5 524 aaKnown RBP12.2□□□□□ -0.46
SRSF4-205ENST00000497015 BICC1Q9H694 974 aaKnown RBP12.2□□□□□ -0.46
SRSF4-205ENST00000497015 TXNRD2Q9NNW7 524 aa12.2□□□□□ -0.46
SRSF4-205ENST00000497015 C9orf78Q9NZ63 289 aaPredicted RBP12.2□□□□□ -0.46
SRSF4-205ENST00000497015 UTYO14607 1347 aa12.19□□□□□ -0.46
SRSF4-205ENST00000497015 FAM196BA6NMK8 535 aa12.19□□□□□ -0.46
SRSF4-205ENST00000497015 IPO8O15397 1037 aaKnown RBP12.19□□□□□ -0.46
SRSF4-205ENST00000497015 ENTPD3O75355 529 aa12.19□□□□□ -0.46
SRSF4-205ENST00000497015 XRCC5P13010 732 aaKnown RBP12.19□□□□□ -0.46
SRSF4-205ENST00000497015 GCLCP48506 637 aaPredicted RBP12.19□□□□□ -0.46
SRSF4-205ENST00000497015 PROCA1Q8NCQ7 364 aaPredicted RBP12.19□□□□□ -0.46
SRSF4-205ENST00000497015 WDR66Q8TBY9 1149 aa12.19□□□□□ -0.46
SRSF4-205ENST00000497015 P2RX7Q99572 595 aaKnown RBP12.19□□□□□ -0.46
SRSF4-205ENST00000497015 SENP6Q9GZR1 1112 aaPredicted RBP12.19□□□□□ -0.46
SRSF4-205ENST00000497015 SLC24A3Q9HC58 644 aa12.19□□□□□ -0.46
SRSF4-205ENST00000497015 MORF4L1Q9UBU8 362 aa12.19□□□□□ -0.46
SRSF4-205ENST00000497015 LRRFIP2Q9Y608 721 aaKnown RBP12.19□□□□□ -0.46
SRSF4-205ENST00000497015 RFX7Q2KHR2 1363 aa12.18□□□□□ -0.46
SRSF4-205ENST00000497015 TNFRSF10AO00220 468 aa12.18□□□□□ -0.46
SRSF4-205ENST00000497015 HMGCS2P54868 508 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms