RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 IDH1O75874 414 aaKnown RBP18.43■□□□□ 0.54
NEK4-206ENST00000496822 BAG3O95817 575 aa18.43■□□□□ 0.54
NEK4-206ENST00000496822 CYP2C8P10632 490 aa18.43■□□□□ 0.54
NEK4-206ENST00000496822 CYP7A1P22680 504 aa18.43■□□□□ 0.54
NEK4-206ENST00000496822 GADL1Q6ZQY3 521 aa18.43■□□□□ 0.54
NEK4-206ENST00000496822 RPAP2Q8IXW5 612 aaPredicted RBP18.43■□□□□ 0.54
NEK4-206ENST00000496822 TGFBRAP1Q8WUH2 860 aa18.43■□□□□ 0.54
NEK4-206ENST00000496822 CDK5RAP2Q96SN8 1893 aa18.43■□□□□ 0.54
NEK4-206ENST00000496822 CENPFP49454 3210 aa18.43■□□□□ 0.54
NEK4-206ENST00000496822 PLCG2P16885 1265 aa18.42■□□□□ 0.54
NEK4-206ENST00000496822 HSP90AB4PQ58FF6 505 aa18.42■□□□□ 0.54
NEK4-206ENST00000496822 MIGA1Q8NAN2 632 aa18.42■□□□□ 0.54
NEK4-206ENST00000496822 ARMC5Q96C12 935 aa18.42■□□□□ 0.54
NEK4-206ENST00000496822 DNAJC18Q9H819 358 aa18.42■□□□□ 0.54
NEK4-206ENST00000496822 PTPRFP10586 1907 aa18.42■□□□□ 0.54
NEK4-206ENST00000496822 FOCADQ5VW36 1801 aa18.42■□□□□ 0.54
NEK4-206ENST00000496822 POTEFA5A3E0 1075 aa18.41■□□□□ 0.54
NEK4-206ENST00000496822 MAGEB6Q8N7X4 407 aa18.41■□□□□ 0.54
NEK4-206ENST00000496822 PARK7Q99497 189 aaKnown RBP18.41■□□□□ 0.54
NEK4-206ENST00000496822 HMMRO75330 724 aa18.4■□□□□ 0.54
NEK4-206ENST00000496822 CAP2P40123 477 aa18.4■□□□□ 0.54
NEK4-206ENST00000496822 KIF22Q14807 665 aa18.4■□□□□ 0.54
NEK4-206ENST00000496822 ARHGEF6Q15052 776 aa18.4■□□□□ 0.54
NEK4-206ENST00000496822 SHROOM1Q2M3G4 852 aaPredicted RBP18.4■□□□□ 0.54
NEK4-206ENST00000496822 SLC4A8Q2Y0W8 1093 aa18.4■□□□□ 0.54
NEK4-206ENST00000496822 FASTKD5Q7L8L6 764 aaKnown RBP18.4■□□□□ 0.54
NEK4-206ENST00000496822 KIF1BPQ96EK5 621 aa18.4■□□□□ 0.54
NEK4-206ENST00000496822 TRIM47Q96LD4 638 aa18.4■□□□□ 0.54
NEK4-206ENST00000496822 BCL11AQ9H165 835 aa18.4■□□□□ 0.54
NEK4-206ENST00000496822 PI4KBQ9UBF8 816 aa18.4■□□□□ 0.54
NEK4-206ENST00000496822 SAP30BPQ9UHR5 308 aaKnown RBP18.4■□□□□ 0.54
NEK4-206ENST00000496822 HERC5Q9UII4 1024 aaKnown RBP18.4■□□□□ 0.54
NEK4-206ENST00000496822 PALD1Q9ULE6 856 aa18.4■□□□□ 0.54
NEK4-206ENST00000496822 ATAD5Q96QE3 1844 aa18.39■□□□□ 0.54
NEK4-206ENST00000496822 IGSF3O75054 1194 aa18.39■□□□□ 0.53
NEK4-206ENST00000496822 BCRP11274 1271 aa18.39■□□□□ 0.53
NEK4-206ENST00000496822 JAG1P78504 1218 aa18.39■□□□□ 0.53
NEK4-206ENST00000496822 CLASRPQ8N2M8 674 aaKnown RBP18.39■□□□□ 0.53
NEK4-206ENST00000496822 ZNF333Q96JL9 665 aa18.39■□□□□ 0.53
NEK4-206ENST00000496822 DHX36Q9H2U1 1008 aaKnown RBP18.39■□□□□ 0.53
NEK4-206ENST00000496822 BRCA2P51587 3418 aa18.38■□□□□ 0.53
NEK4-206ENST00000496822 PSMC4P43686 418 aa18.38■□□□□ 0.53
NEK4-206ENST00000496822 SPP2Q13103 211 aa18.38■□□□□ 0.53
NEK4-206ENST00000496822 SLC9C1Q4G0N8 1177 aa18.38■□□□□ 0.53
NEK4-206ENST00000496822 TREML2Q5T2D2 321 aa18.38■□□□□ 0.53
NEK4-206ENST00000496822 LOC285556D6RIA3 1793 aa18.37■□□□□ 0.53
NEK4-206ENST00000496822 OSBPP22059 807 aa18.37■□□□□ 0.53
NEK4-206ENST00000496822 MAP3K12Q12852 859 aa18.37■□□□□ 0.53
NEK4-206ENST00000496822 PDE3AQ14432 1141 aa18.37■□□□□ 0.53
NEK4-206ENST00000496822 METTL16Q86W50 562 aaKnown RBP18.37■□□□□ 0.53
NEK4-206ENST00000496822 ZNF280CQ8ND82 737 aa18.37■□□□□ 0.53
NEK4-206ENST00000496822 SH3TC2Q8TF17 1288 aa18.37■□□□□ 0.53
NEK4-206ENST00000496822 AGTPBP1Q9UPW5 1226 aa18.37■□□□□ 0.53
NEK4-206ENST00000496822 SLC45A1Q9Y2W3 748 aa18.37■□□□□ 0.53
NEK4-206ENST00000496822 RBBP6Q7Z6E9 1792 aaKnown RBP18.37■□□□□ 0.53
NEK4-206ENST00000496822 USP17L5A8MUK1 530 aa18.36■□□□□ 0.53
NEK4-206ENST00000496822 RAB11FIP3O75154 756 aa18.36■□□□□ 0.53
NEK4-206ENST00000496822 GDF11O95390 407 aa18.36■□□□□ 0.53
NEK4-206ENST00000496822 FMNL1O95466 1100 aaPredicted RBP18.36■□□□□ 0.53
NEK4-206ENST00000496822 MYCP01106 439 aaPredicted RBP18.36■□□□□ 0.53
NEK4-206ENST00000496822 IFIT2P09913 472 aaKnown RBP18.36■□□□□ 0.53
NEK4-206ENST00000496822 HMGCS2P54868 508 aa18.36■□□□□ 0.53
NEK4-206ENST00000496822 EDC3Q96F86 508 aaKnown RBP18.36■□□□□ 0.53
NEK4-206ENST00000496822 DNAJC2Q99543 621 aaKnown RBP18.36■□□□□ 0.53
NEK4-206ENST00000496822 DDX60LQ5H9U9 1706 aaKnown RBP18.35■□□□□ 0.53
NEK4-206ENST00000496822 GOLIM4O00461 696 aa18.35■□□□□ 0.53
NEK4-206ENST00000496822 GNRH1P01148 92 aa18.35■□□□□ 0.53
NEK4-206ENST00000496822 PDE6AP16499 860 aa18.35■□□□□ 0.53
NEK4-206ENST00000496822 CRACR2BQ8N4Y2 399 aaPredicted RBP18.35■□□□□ 0.53
NEK4-206ENST00000496822 RIOK1Q9BRS2 568 aaKnown RBP18.35■□□□□ 0.53
NEK4-206ENST00000496822 CHMP4BQ9H444 224 aaKnown RBP18.35■□□□□ 0.53
NEK4-206ENST00000496822 SRRDQ9UH36 339 aa18.35■□□□□ 0.53
NEK4-206ENST00000496822 HLA-DOAP06340 250 aa18.34■□□□□ 0.53
NEK4-206ENST00000496822 EN2P19622 333 aaPredicted RBP18.34■□□□□ 0.53
NEK4-206ENST00000496822 USP5P45974 858 aa18.34■□□□□ 0.53
NEK4-206ENST00000496822 FOXP4Q8IVH2 680 aaPredicted RBP18.34■□□□□ 0.53
NEK4-206ENST00000496822 PROCA1Q8NCQ7 364 aaPredicted RBP18.34■□□□□ 0.53
NEK4-206ENST00000496822 SMCR8Q8TEV9 937 aaPredicted RBP18.34■□□□□ 0.53
NEK4-206ENST00000496822 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.34■□□□□ 0.53
NEK4-206ENST00000496822 TRIM34Q9BYJ4 488 aa18.34■□□□□ 0.53
NEK4-206ENST00000496822 MYPNQ86TC9 1320 aa18.33■□□□□ 0.53
NEK4-206ENST00000496822 PRMT2P55345 433 aa18.33■□□□□ 0.52
NEK4-206ENST00000496822 PRKCZQ05513 592 aa18.33■□□□□ 0.52
NEK4-206ENST00000496822 MTMR2Q13614 643 aa18.33■□□□□ 0.52
NEK4-206ENST00000496822 TTF1Q15361 905 aaPredicted RBP18.33■□□□□ 0.52
NEK4-206ENST00000496822 SLC9C2Q5TAH2 1124 aa18.33■□□□□ 0.52
NEK4-206ENST00000496822 NBPF11Q86T75 865 aa18.33■□□□□ 0.52
NEK4-206ENST00000496822 CERS3Q8IU89 383 aa18.33■□□□□ 0.52
NEK4-206ENST00000496822 TBC1D2Q9BYX2 928 aa18.33■□□□□ 0.52
NEK4-206ENST00000496822 ZBTB21Q9ULJ3 1066 aa18.33■□□□□ 0.52
NEK4-206ENST00000496822 MKI67P46013 3256 aaKnown RBP18.33■□□□□ 0.52
NEK4-206ENST00000496822 PDE4DIPQ5VU43 2346 aa18.32■□□□□ 0.52
NEK4-206ENST00000496822 ZNF532Q9HCE3 1301 aa18.32■□□□□ 0.52
NEK4-206ENST00000496822 TCRBV5S4A2TA0A5A2 114 aa18.32■□□□□ 0.52
NEK4-206ENST00000496822 ASNSP08243 561 aa18.32■□□□□ 0.52
NEK4-206ENST00000496822 FCGRTP55899 365 aa18.32■□□□□ 0.52
NEK4-206ENST00000496822 SLFNL1Q499Z3 407 aa18.32■□□□□ 0.52
NEK4-206ENST00000496822 SH3D19Q5HYK7 790 aa18.32■□□□□ 0.52
NEK4-206ENST00000496822 TMED8Q6PL24 325 aaPredicted RBP18.32■□□□□ 0.52
NEK4-206ENST00000496822 WDR18Q9BV38 432 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms