RNA–Protein interactions for RNA: ENST00000496756.2

PHGDH-207, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-207ENST00000496756 GDF15Q99988 308 aa16.05■□□□□ 0.16
PHGDH-207ENST00000496756 CRISPLD2Q9H0B8 497 aa16.05■□□□□ 0.16
PHGDH-207ENST00000496756 PICK1Q9NRD5 415 aa16.05■□□□□ 0.16
PHGDH-207ENST00000496756 PUM3Q15397 648 aaKnown RBP16.04■□□□□ 0.16
PHGDH-207ENST00000496756 LRRC24Q50LG9 513 aa16.04■□□□□ 0.16
PHGDH-207ENST00000496756 CDC42EP5Q6NZY7 148 aa16.04■□□□□ 0.16
PHGDH-207ENST00000496756 CASC1Q6TDU7 716 aa16.04■□□□□ 0.16
PHGDH-207ENST00000496756 PLEKHM2Q8IWE5 1019 aa16.04■□□□□ 0.16
PHGDH-207ENST00000496756 DEFB123Q8N688 67 aa16.04■□□□□ 0.16
PHGDH-207ENST00000496756 ANKLE1Q8NAG6 615 aa16.04■□□□□ 0.16
PHGDH-207ENST00000496756 COA7Q96BR5 231 aa16.04■□□□□ 0.16
PHGDH-207ENST00000496756 DDRGK1Q96HY6 314 aa16.04■□□□□ 0.16
PHGDH-207ENST00000496756 KAZALD1Q96I82 304 aa16.04■□□□□ 0.16
PHGDH-207ENST00000496756 EXOC6BQ9Y2D4 811 aa16.04■□□□□ 0.16
PHGDH-207ENST00000496756 STXBP5LQ9Y2K9 1186 aa16.04■□□□□ 0.16
PHGDH-207ENST00000496756 ZHX2Q9Y6X8 837 aa16.04■□□□□ 0.16
PHGDH-207ENST00000496756 OS9Q13438 667 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-207ENST00000496756 RABL6Q3YEC7 729 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-207ENST00000496756 SCYL3Q8IZE3 742 aa16.03■□□□□ 0.16
PHGDH-207ENST00000496756 DAGLAQ9Y4D2 1042 aa16.03■□□□□ 0.16
PHGDH-207ENST00000496756 PTPRAP18433 802 aa16.02■□□□□ 0.16
PHGDH-207ENST00000496756 NFIAQ12857 509 aa16.02■□□□□ 0.16
PHGDH-207ENST00000496756 G3BP1Q13283 466 aaKnown RBP eCLIP16.02■□□□□ 0.162e-8■□□□□ 10
PHGDH-207ENST00000496756 LRIT3Q3SXY7 679 aa16.02■□□□□ 0.16
PHGDH-207ENST00000496756 TTC22Q5TAA0 569 aa16.02■□□□□ 0.16
PHGDH-207ENST00000496756 GADL1Q6ZQY3 521 aa16.02■□□□□ 0.16
PHGDH-207ENST00000496756 BICC1Q9H694 974 aaKnown RBP16.02■□□□□ 0.16
PHGDH-207ENST00000496756 TAOK2Q9UL54 1235 aa16.02■□□□□ 0.16
PHGDH-207ENST00000496756 AFG3L2Q9Y4W6 797 aa16.02■□□□□ 0.16
PHGDH-207ENST00000496756 PHF20L1A8MW92 1017 aa16.01■□□□□ 0.15
PHGDH-207ENST00000496756 C7orf61Q8IZ16 206 aa16.01■□□□□ 0.15
PHGDH-207ENST00000496756 CLASRPQ8N2M8 674 aaKnown RBP16.01■□□□□ 0.15
PHGDH-207ENST00000496756 RHPN1Q8TCX5 695 aa16.01■□□□□ 0.15
PHGDH-207ENST00000496756 GPATCH3Q96I76 525 aa16.01■□□□□ 0.15
PHGDH-207ENST00000496756 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.01■□□□□ 0.15
PHGDH-207ENST00000496756 USP40Q9NVE5 1235 aa16.01■□□□□ 0.15
PHGDH-207ENST00000496756 FAM198AQ9UFP1 575 aa16.01■□□□□ 0.15
PHGDH-207ENST00000496756 MYH13Q9UKX3 1938 aa16■□□□□ 0.15
PHGDH-207ENST00000496756 CDC45O75419 566 aa16■□□□□ 0.15
PHGDH-207ENST00000496756 SLC5A1P13866 664 aa16■□□□□ 0.15
PHGDH-207ENST00000496756 MX1P20591 662 aa16■□□□□ 0.15
PHGDH-207ENST00000496756 FGFR2P21802 821 aa16■□□□□ 0.15
PHGDH-207ENST00000496756 DIXDC1Q155Q3 683 aa16■□□□□ 0.15
PHGDH-207ENST00000496756 LPIN2Q92539 896 aa16■□□□□ 0.15
PHGDH-207ENST00000496756 NBPF3Q9H094 633 aa16■□□□□ 0.15
PHGDH-207ENST00000496756 PNMA3Q9UL41 463 aa16■□□□□ 0.15
PHGDH-207ENST00000496756 ALPK3Q96L96 1907 aa16■□□□□ 0.15
PHGDH-207ENST00000496756 APBB1O00213 710 aa15.99■□□□□ 0.15
PHGDH-207ENST00000496756 CTNND1O60716 968 aaKnown RBP15.99■□□□□ 0.15
PHGDH-207ENST00000496756 ENTPD3O75355 529 aa15.99■□□□□ 0.15
PHGDH-207ENST00000496756 HMGCRP04035 888 aa15.99■□□□□ 0.15
PHGDH-207ENST00000496756 LDHBP07195 334 aaKnown RBP15.99■□□□□ 0.15
PHGDH-207ENST00000496756 PDE1AP54750 535 aa15.99■□□□□ 0.15
PHGDH-207ENST00000496756 FAM110CQ1W6H9 321 aa15.99■□□□□ 0.15
PHGDH-207ENST00000496756 TDHQ8IZJ6 230 aa15.99■□□□□ 0.15
PHGDH-207ENST00000496756 DIS3LQ8TF46 1054 aaKnown RBP15.99■□□□□ 0.15
PHGDH-207ENST00000496756 COPRSQ9NQ92 184 aa15.99■□□□□ 0.15
PHGDH-207ENST00000496756 FBXO3Q9UK99 471 aa15.99■□□□□ 0.15
PHGDH-207ENST00000496756 ZMYND8Q9ULU4 1186 aaPredicted RBP15.99■□□□□ 0.15
PHGDH-207ENST00000496756 AGTPBP1Q9UPW5 1226 aa15.99■□□□□ 0.15
PHGDH-207ENST00000496756 UNC80Q8N2C7 3258 aa15.99■□□□□ 0.15
PHGDH-207ENST00000496756 TTC41PQ6P2S7 1318 aa15.98■□□□□ 0.15
PHGDH-207ENST00000496756 RPTORQ8N122 1335 aa15.98■□□□□ 0.15
PHGDH-207ENST00000496756 PRDX5P30044 214 aa15.98■□□□□ 0.15
PHGDH-207ENST00000496756 MAP3K10Q02779 954 aa15.98■□□□□ 0.15
PHGDH-207ENST00000496756 ANKRD13CQ8N6S4 541 aa15.98■□□□□ 0.15
PHGDH-207ENST00000496756 IDI2Q9BXS1 227 aa15.98■□□□□ 0.15
PHGDH-207ENST00000496756 HMX1Q9NP08 348 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-207ENST00000496756 GNL3LQ9NVN8 582 aaKnown RBP15.98■□□□□ 0.15
PHGDH-207ENST00000496756 MTMR10Q9NXD2 777 aa15.98■□□□□ 0.15
PHGDH-207ENST00000496756 ATRNL1Q5VV63 1379 aa15.98■□□□□ 0.15
PHGDH-207ENST00000496756 DOCK3Q8IZD9 2030 aa15.97■□□□□ 0.15
PHGDH-207ENST00000496756 SALL3Q9BXA9 1300 aa15.97■□□□□ 0.15
PHGDH-207ENST00000496756 DOCK2Q92608 1830 aa15.97■□□□□ 0.15
PHGDH-207ENST00000496756 TRIM75PA6NK02 468 aa15.97■□□□□ 0.15
PHGDH-207ENST00000496756 ERC2O15083 957 aa15.97■□□□□ 0.15
PHGDH-207ENST00000496756 SMARCA5O60264 1052 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-207ENST00000496756 Q7L0L9 218 aa15.97■□□□□ 0.15
PHGDH-207ENST00000496756 ZSCAN29Q8IWY8 852 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-207ENST00000496756 ZFPM1Q8IX07 1006 aa15.97■□□□□ 0.15
PHGDH-207ENST00000496756 IPO9Q96P70 1041 aaKnown RBP15.97■□□□□ 0.15
PHGDH-207ENST00000496756 PTPRFP10586 1907 aa15.97■□□□□ 0.15
PHGDH-207ENST00000496756 SALL1Q9NSC2 1324 aa15.96■□□□□ 0.15
PHGDH-207ENST00000496756 MAGEA10P43363 369 aaPredicted RBP15.96■□□□□ 0.15
PHGDH-207ENST00000496756 GCLCP48506 637 aaPredicted RBP15.96■□□□□ 0.15
PHGDH-207ENST00000496756 KLHDC4Q8TBB5 520 aa15.96■□□□□ 0.15
PHGDH-207ENST00000496756 UBE2OQ9C0C9 1292 aaKnown RBP15.96■□□□□ 0.15
PHGDH-207ENST00000496756 C11orf49Q9H6J7 331 aa15.96■□□□□ 0.15
PHGDH-207ENST00000496756 EYA2O00167 538 aa15.95■□□□□ 0.14
PHGDH-207ENST00000496756 SEMA3EO15041 775 aa15.95■□□□□ 0.14
PHGDH-207ENST00000496756 SYN1P17600 705 aa15.95■□□□□ 0.14
PHGDH-207ENST00000496756 ZGPATQ8N5A5 531 aaKnown RBP15.95■□□□□ 0.14
PHGDH-207ENST00000496756 PROCA1Q8NCQ7 364 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-207ENST00000496756 DOCK1Q14185 1865 aa15.95■□□□□ 0.14
PHGDH-207ENST00000496756 IFIT2P09913 472 aaKnown RBP15.94■□□□□ 0.14
PHGDH-207ENST00000496756 GSPT1P15170 499 aaKnown RBP15.94■□□□□ 0.14
PHGDH-207ENST00000496756 PABPC4Q13310 644 aaKnown RBP eCLIP15.94■□□□□ 0.14
PHGDH-207ENST00000496756 SLF2Q8IX21 1173 aa15.94■□□□□ 0.14
PHGDH-207ENST00000496756 OGDHLQ9ULD0 1010 aa15.94■□□□□ 0.14
PHGDH-207ENST00000496756 DENND2AQ9ULE3 1009 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms