RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 FAM196BA6NMK8 535 aa27.39■■□□□ 1.98
CHRD-217ENST00000496527 CTNND1O60716 968 aaKnown RBP27.39■■□□□ 1.98
CHRD-217ENST00000496527 TRPA1O75762 1119 aa27.39■■□□□ 1.98
CHRD-217ENST00000496527 HSPA8P11142 646 aaKnown RBP27.39■■□□□ 1.98
CHRD-217ENST00000496527 CRACR2BQ8N4Y2 399 aaPredicted RBP27.39■■□□□ 1.98
CHRD-217ENST00000496527 FSD1Q9BTV5 496 aa27.39■■□□□ 1.98
CHRD-217ENST00000496527 TRIM34Q9BYJ4 488 aa27.39■■□□□ 1.98
CHRD-217ENST00000496527 PICK1Q9NRD5 415 aa27.39■■□□□ 1.98
CHRD-217ENST00000496527 SAGE1Q9NXZ1 904 aa27.39■■□□□ 1.98
CHRD-217ENST00000496527 TSKSQ9UJT2 592 aa27.39■■□□□ 1.98
CHRD-217ENST00000496527 MYH7P12883 1935 aa27.39■■□□□ 1.97
CHRD-217ENST00000496527 GTF2A2P52657 109 aa27.38■■□□□ 1.97
CHRD-217ENST00000496527 LBX1P52954 281 aa27.38■■□□□ 1.97
CHRD-217ENST00000496527 PPATQ06203 517 aa27.38■■□□□ 1.97
CHRD-217ENST00000496527 SLC4A8Q2Y0W8 1093 aa27.38■■□□□ 1.97
CHRD-217ENST00000496527 SCYL3Q8IZE3 742 aa27.38■■□□□ 1.97
CHRD-217ENST00000496527 PUS7LQ9H0K6 701 aaKnown RBP27.38■■□□□ 1.97
CHRD-217ENST00000496527 PPIL2Q13356 520 aa27.37■■□□□ 1.97
CHRD-217ENST00000496527 TTC6Q86TZ1 520 aa27.37■■□□□ 1.97
CHRD-217ENST00000496527 SDR42E1Q8WUS8 393 aa27.37■■□□□ 1.97
CHRD-217ENST00000496527 APPBP2Q92624 585 aa27.37■■□□□ 1.97
CHRD-217ENST00000496527 EVI5LQ96CN4 794 aa27.36■■□□□ 1.97
CHRD-217ENST00000496527 IRF6O14896 467 aa27.35■■□□□ 1.97
CHRD-217ENST00000496527 POLR3DP05423 398 aaPredicted RBP27.35■■□□□ 1.97
CHRD-217ENST00000496527 METTL16Q86W50 562 aaKnown RBP27.35■■□□□ 1.97
CHRD-217ENST00000496527 IFNL1Q8IU54 200 aa27.35■■□□□ 1.97
CHRD-217ENST00000496527 PLEKHM2Q8IWE5 1019 aa27.35■■□□□ 1.97
CHRD-217ENST00000496527 MS4A4AQ96JQ5 239 aa27.35■■□□□ 1.97
CHRD-217ENST00000496527 DCP1AQ9NPI6 582 aaPredicted RBP27.35■■□□□ 1.97
CHRD-217ENST00000496527 ATP8A2Q9NTI2 1148 aa27.35■■□□□ 1.97
CHRD-217ENST00000496527 MCM9Q9NXL9 1143 aa27.35■■□□□ 1.97
CHRD-217ENST00000496527 PRKAB2O43741 272 aa27.34■■□□□ 1.97
CHRD-217ENST00000496527 SNAPC2Q13487 334 aa27.34■■□□□ 1.97
CHRD-217ENST00000496527 OTUD7BQ6GQQ9 843 aa27.34■■□□□ 1.97
CHRD-217ENST00000496527 PRDM10Q9NQV6 1147 aa27.34■■□□□ 1.97
CHRD-217ENST00000496527 CCL15-CCL14A0A0B4J2E2 113 aa27.33■■□□□ 1.97
CHRD-217ENST00000496527 TESPA1A2RU30 521 aaPredicted RBP27.33■■□□□ 1.97
CHRD-217ENST00000496527 ALDH1A1P00352 501 aa27.33■■□□□ 1.97
CHRD-217ENST00000496527 PTPRAP18433 802 aa27.33■■□□□ 1.97
CHRD-217ENST00000496527 CCL15Q16663 113 aa27.33■■□□□ 1.97
CHRD-217ENST00000496527 OSBP2Q969R2 916 aa27.33■■□□□ 1.97
CHRD-217ENST00000496527 DDRGK1Q96HY6 314 aa27.33■■□□□ 1.97
CHRD-217ENST00000496527 OSBPL3Q9H4L5 887 aa27.33■■□□□ 1.97
CHRD-217ENST00000496527 SLC4A4Q9Y6R1 1079 aa27.33■■□□□ 1.97
CHRD-217ENST00000496527 MYH1P12882 1939 aa27.33■■□□□ 1.97
CHRD-217ENST00000496527 CETPP11597 493 aa27.32■■□□□ 1.96
CHRD-217ENST00000496527 CAP2P40123 477 aa27.32■■□□□ 1.96
CHRD-217ENST00000496527 EHD4Q9H223 541 aa27.32■■□□□ 1.96
CHRD-217ENST00000496527 DNAJC18Q9H819 358 aa27.32■■□□□ 1.96
CHRD-217ENST00000496527 SERPINB13Q9UIV8 391 aa27.32■■□□□ 1.96
CHRD-217ENST00000496527 ZHX2Q9Y6X8 837 aa27.32■■□□□ 1.96
CHRD-217ENST00000496527 TRIM6-TRIM34B2RNG4 842 aa27.31■■□□□ 1.96
CHRD-217ENST00000496527 IGF2BP3O00425 579 aaKnown RBP eCLIP27.31■■□□□ 1.96
CHRD-217ENST00000496527 BRI3BPQ8WY22 251 aa27.31■■□□□ 1.96
CHRD-217ENST00000496527 STRBPQ96SI9 672 aaKnown RBP27.31■■□□□ 1.96
CHRD-217ENST00000496527 SIPA1L1O43166 1804 aa27.3■■□□□ 1.96
CHRD-217ENST00000496527 PLCD1P51178 756 aa27.3■■□□□ 1.96
CHRD-217ENST00000496527 RRP1BQ14684 758 aaKnown RBP27.3■■□□□ 1.96
CHRD-217ENST00000496527 PTPN18Q99952 460 aa27.3■■□□□ 1.96
CHRD-217ENST00000496527 KCNH4Q9UQ05 1017 aa27.3■■□□□ 1.96
CHRD-217ENST00000496527 GPAA1O43292 621 aa27.29■■□□□ 1.96
CHRD-217ENST00000496527 TBC1D8O95759 1140 aa27.29■■□□□ 1.96
CHRD-217ENST00000496527 ZMYM1Q5SVZ6 1142 aa27.29■■□□□ 1.96
CHRD-217ENST00000496527 AMOTL1Q8IY63 956 aa27.29■■□□□ 1.96
CHRD-217ENST00000496527 LAMB1P07942 1786 aa27.29■■□□□ 1.96
CHRD-217ENST00000496527 NAV1Q8NEY1 1877 aa27.29■■□□□ 1.96
CHRD-217ENST00000496527 DOCK1Q14185 1865 aa27.28■■□□□ 1.96
CHRD-217ENST00000496527 M0R2C6 588 aa27.28■■□□□ 1.96
CHRD-217ENST00000496527 CXCL11O14625 94 aa27.28■■□□□ 1.96
CHRD-217ENST00000496527 CENPBP07199 599 aaPredicted RBP27.28■■□□□ 1.96
CHRD-217ENST00000496527 RILPL2Q969X0 211 aa27.28■■□□□ 1.96
CHRD-217ENST00000496527 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.28■■□□□ 1.96
CHRD-217ENST00000496527 GNAT2P19087 354 aa27.27■■□□□ 1.96
CHRD-217ENST00000496527 COL13A1Q5TAT6 717 aaPredicted RBP27.27■■□□□ 1.96
CHRD-217ENST00000496527 AFG3L2Q9Y4W6 797 aa27.27■■□□□ 1.96
CHRD-217ENST00000496527 NEFLP07196 543 aa27.26■■□□□ 1.95
CHRD-217ENST00000496527 ASNSP08243 561 aa27.26■■□□□ 1.95
CHRD-217ENST00000496527 CYP2D6P10635 497 aa27.26■■□□□ 1.95
CHRD-217ENST00000496527 PDE4AP27815 886 aa27.26■■□□□ 1.95
CHRD-217ENST00000496527 TICAM2Q86XR7 235 aa27.26■■□□□ 1.95
CHRD-217ENST00000496527 SEC62Q99442 399 aaKnown RBP27.26■■□□□ 1.95
CHRD-217ENST00000496527 CFHR5Q9BXR6 569 aa27.26■■□□□ 1.95
CHRD-217ENST00000496527 GINM1Q9NU53 330 aa27.26■■□□□ 1.95
CHRD-217ENST00000496527 DDX60LQ5H9U9 1706 aaKnown RBP27.25■■□□□ 1.95
CHRD-217ENST00000496527 USP17L5A8MUK1 530 aa27.25■■□□□ 1.95
CHRD-217ENST00000496527 USP17L12C9JPN9 530 aa27.25■■□□□ 1.95
CHRD-217ENST00000496527 USP17L21D6R901 530 aa27.25■■□□□ 1.95
CHRD-217ENST00000496527 GDF11O95390 407 aa27.25■■□□□ 1.95
CHRD-217ENST00000496527 TATDN1Q6P1N9 297 aa27.25■■□□□ 1.95
CHRD-217ENST00000496527 CCDC84Q86UT8 332 aaPredicted RBP27.25■■□□□ 1.95
CHRD-217ENST00000496527 TBC1D2Q9BYX2 928 aa27.25■■□□□ 1.95
CHRD-217ENST00000496527 TRIM75PA6NK02 468 aa27.24■■□□□ 1.95
CHRD-217ENST00000496527 GSG1L2A8MUP6 293 aa27.24■■□□□ 1.95
CHRD-217ENST00000496527 GABPAQ06546 454 aa27.24■■□□□ 1.95
CHRD-217ENST00000496527 GIMAP6Q6P9H5 292 aa27.24■■□□□ 1.95
CHRD-217ENST00000496527 FAM43AQ8N2R8 423 aa27.24■■□□□ 1.95
CHRD-217ENST00000496527 AS3MTQ9HBK9 375 aa27.24■■□□□ 1.95
CHRD-217ENST00000496527 BTBD19C9JJ37 291 aa27.23■■□□□ 1.95
CHRD-217ENST00000496527 APPP05067 770 aa27.23■■□□□ 1.95
CHRD-217ENST00000496527 EVX2Q03828 476 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms