RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 ZHX2Q9Y6X8 837 aa17.48■□□□□ 0.39
VTI1A-209ENST00000496445 LACTBP83111 547 aaPredicted RBP17.47■□□□□ 0.39
VTI1A-209ENST00000496445 AACSQ86V21 672 aa17.47■□□□□ 0.39
VTI1A-209ENST00000496445 FLT1P17948 1338 aa17.47■□□□□ 0.39
VTI1A-209ENST00000496445 CTGFP29279 349 aa17.46■□□□□ 0.39
VTI1A-209ENST00000496445 PPP4CP60510 307 aa17.46■□□□□ 0.39
VTI1A-209ENST00000496445 RRP1BQ14684 758 aaKnown RBP17.46■□□□□ 0.39
VTI1A-209ENST00000496445 RHPN1Q8TCX5 695 aa17.46■□□□□ 0.39
VTI1A-209ENST00000496445 ARMC5Q96C12 935 aa17.46■□□□□ 0.39
VTI1A-209ENST00000496445 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.46■□□□□ 0.39
VTI1A-209ENST00000496445 IL1RAPL2Q9NP60 686 aa17.46■□□□□ 0.39
VTI1A-209ENST00000496445 CPA4Q9UI42 421 aa17.46■□□□□ 0.39
VTI1A-209ENST00000496445 PTCH2Q9Y6C5 1203 aa17.46■□□□□ 0.39
VTI1A-209ENST00000496445 NAV1Q8NEY1 1877 aa17.46■□□□□ 0.38
VTI1A-209ENST00000496445 IGSF3O75054 1194 aa17.45■□□□□ 0.38
VTI1A-209ENST00000496445 BAG3O95817 575 aa17.45■□□□□ 0.38
VTI1A-209ENST00000496445 C20orf194Q5TEA3 1177 aa17.45■□□□□ 0.38
VTI1A-209ENST00000496445 MAPKAPK5Q8IW41 473 aa17.45■□□□□ 0.38
VTI1A-209ENST00000496445 NOL10Q9BSC4 688 aaKnown RBP17.45■□□□□ 0.38
VTI1A-209ENST00000496445 ANTXR1Q9H6X2 564 aa17.45■□□□□ 0.38
VTI1A-209ENST00000496445 CYP2C8P10632 490 aa17.44■□□□□ 0.38
VTI1A-209ENST00000496445 PLCG2P16885 1265 aa17.44■□□□□ 0.38
VTI1A-209ENST00000496445 DYNLL1P63167 89 aaKnown RBP17.44■□□□□ 0.38
VTI1A-209ENST00000496445 RPAP2Q8IXW5 612 aaPredicted RBP17.44■□□□□ 0.38
VTI1A-209ENST00000496445 TGFBRAP1Q8WUH2 860 aa17.44■□□□□ 0.38
VTI1A-209ENST00000496445 PARK7Q99497 189 aaKnown RBP17.44■□□□□ 0.38
VTI1A-209ENST00000496445 DNAJC18Q9H819 358 aa17.44■□□□□ 0.38
VTI1A-209ENST00000496445 KIAA0100Q14667 2235 aaKnown RBP17.44■□□□□ 0.38
VTI1A-209ENST00000496445 POTEFA5A3E0 1075 aa17.43■□□□□ 0.38
VTI1A-209ENST00000496445 TRIM75PA6NK02 468 aa17.43■□□□□ 0.38
VTI1A-209ENST00000496445 IDH1O75874 414 aaKnown RBP17.43■□□□□ 0.38
VTI1A-209ENST00000496445 BCRP11274 1271 aa17.43■□□□□ 0.38
VTI1A-209ENST00000496445 CYP7A1P22680 504 aa17.43■□□□□ 0.38
VTI1A-209ENST00000496445 HSP90AB4PQ58FF6 505 aa17.43■□□□□ 0.38
VTI1A-209ENST00000496445 GADL1Q6ZQY3 521 aa17.43■□□□□ 0.38
VTI1A-209ENST00000496445 ZNF333Q96JL9 665 aa17.43■□□□□ 0.38
VTI1A-209ENST00000496445 HERC5Q9UII4 1024 aaKnown RBP17.43■□□□□ 0.38
VTI1A-209ENST00000496445 APBB1O00213 710 aa17.42■□□□□ 0.38
VTI1A-209ENST00000496445 ECM2O94769 699 aaPredicted RBP17.42■□□□□ 0.38
VTI1A-209ENST00000496445 CAP2P40123 477 aa17.42■□□□□ 0.38
VTI1A-209ENST00000496445 ARHGEF6Q15052 776 aa17.42■□□□□ 0.38
VTI1A-209ENST00000496445 FASTKD5Q7L8L6 764 aaKnown RBP17.42■□□□□ 0.38
VTI1A-209ENST00000496445 MAGEB6Q8N7X4 407 aa17.42■□□□□ 0.38
VTI1A-209ENST00000496445 MIGA1Q8NAN2 632 aa17.42■□□□□ 0.38
VTI1A-209ENST00000496445 KIF1BPQ96EK5 621 aa17.42■□□□□ 0.38
VTI1A-209ENST00000496445 DHX36Q9H2U1 1008 aaKnown RBP17.42■□□□□ 0.38
VTI1A-209ENST00000496445 MYH7P12883 1935 aa17.42■□□□□ 0.38
VTI1A-209ENST00000496445 HMMRO75330 724 aa17.41■□□□□ 0.38
VTI1A-209ENST00000496445 KIF22Q14807 665 aa17.41■□□□□ 0.38
VTI1A-209ENST00000496445 TREML2Q5T2D2 321 aa17.41■□□□□ 0.38
VTI1A-209ENST00000496445 METTL16Q86W50 562 aaKnown RBP17.41■□□□□ 0.38
VTI1A-209ENST00000496445 TRIM47Q96LD4 638 aa17.41■□□□□ 0.38
VTI1A-209ENST00000496445 PI4KBQ9UBF8 816 aa17.41■□□□□ 0.38
VTI1A-209ENST00000496445 PALD1Q9ULE6 856 aa17.41■□□□□ 0.38
VTI1A-209ENST00000496445 SLC45A1Q9Y2W3 748 aa17.41■□□□□ 0.38
VTI1A-209ENST00000496445 JAG1P78504 1218 aa17.4■□□□□ 0.38
VTI1A-209ENST00000496445 SHROOM1Q2M3G4 852 aaPredicted RBP17.4■□□□□ 0.38
VTI1A-209ENST00000496445 SLC9C1Q4G0N8 1177 aa17.4■□□□□ 0.38
VTI1A-209ENST00000496445 CLASRPQ8N2M8 674 aaKnown RBP17.4■□□□□ 0.38
VTI1A-209ENST00000496445 SAP30BPQ9UHR5 308 aaKnown RBP17.4■□□□□ 0.38
VTI1A-209ENST00000496445 AGTPBP1Q9UPW5 1226 aa17.4■□□□□ 0.38
VTI1A-209ENST00000496445 GNRH1P01148 92 aa17.39■□□□□ 0.37
VTI1A-209ENST00000496445 PSMC4P43686 418 aa17.39■□□□□ 0.37
VTI1A-209ENST00000496445 PDE3AQ14432 1141 aa17.39■□□□□ 0.37
VTI1A-209ENST00000496445 SLC4A8Q2Y0W8 1093 aa17.39■□□□□ 0.37
VTI1A-209ENST00000496445 ZNF280CQ8ND82 737 aa17.39■□□□□ 0.37
VTI1A-209ENST00000496445 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.39■□□□□ 0.37
VTI1A-209ENST00000496445 RAB11FIP3O75154 756 aa17.38■□□□□ 0.37
VTI1A-209ENST00000496445 OSBPP22059 807 aa17.38■□□□□ 0.37
VTI1A-209ENST00000496445 MAP3K12Q12852 859 aa17.38■□□□□ 0.37
VTI1A-209ENST00000496445 SPP2Q13103 211 aa17.38■□□□□ 0.37
VTI1A-209ENST00000496445 PROCA1Q8NCQ7 364 aaPredicted RBP17.38■□□□□ 0.37
VTI1A-209ENST00000496445 SH3TC2Q8TF17 1288 aa17.38■□□□□ 0.37
VTI1A-209ENST00000496445 RIOK1Q9BRS2 568 aaKnown RBP17.38■□□□□ 0.37
VTI1A-209ENST00000496445 SRRDQ9UH36 339 aa17.38■□□□□ 0.37
VTI1A-209ENST00000496445 USP17L5A8MUK1 530 aa17.37■□□□□ 0.37
VTI1A-209ENST00000496445 GDF11O95390 407 aa17.37■□□□□ 0.37
VTI1A-209ENST00000496445 IFIT2P09913 472 aaKnown RBP17.37■□□□□ 0.37
VTI1A-209ENST00000496445 HMGCS2P54868 508 aa17.37■□□□□ 0.37
VTI1A-209ENST00000496445 PRMT2P55345 433 aa17.37■□□□□ 0.37
VTI1A-209ENST00000496445 TMED8Q6PL24 325 aaPredicted RBP17.37■□□□□ 0.37
VTI1A-209ENST00000496445 CERS3Q8IU89 383 aa17.37■□□□□ 0.37
VTI1A-209ENST00000496445 TBC1D2Q9BYX2 928 aa17.37■□□□□ 0.37
VTI1A-209ENST00000496445 CHMP4BQ9H444 224 aaKnown RBP17.37■□□□□ 0.37
VTI1A-209ENST00000496445 MYPNQ86TC9 1320 aa17.37■□□□□ 0.37
VTI1A-209ENST00000496445 DOCK3Q8IZD9 2030 aa17.37■□□□□ 0.37
VTI1A-209ENST00000496445 GOLIM4O00461 696 aa17.36■□□□□ 0.37
VTI1A-209ENST00000496445 FMNL1O95466 1100 aaPredicted RBP17.36■□□□□ 0.37
VTI1A-209ENST00000496445 HLA-DOAP06340 250 aa17.36■□□□□ 0.37
VTI1A-209ENST00000496445 PDE6AP16499 860 aa17.36■□□□□ 0.37
VTI1A-209ENST00000496445 SH3D19Q5HYK7 790 aa17.36■□□□□ 0.37
VTI1A-209ENST00000496445 FOXP4Q8IVH2 680 aaPredicted RBP17.36■□□□□ 0.37
VTI1A-209ENST00000496445 CRACR2BQ8N4Y2 399 aaPredicted RBP17.36■□□□□ 0.37
VTI1A-209ENST00000496445 EDC3Q96F86 508 aaKnown RBP17.36■□□□□ 0.37
VTI1A-209ENST00000496445 DNAJC2Q99543 621 aaKnown RBP17.36■□□□□ 0.37
VTI1A-209ENST00000496445 TCRBV5S4A2TA0A5A2 114 aa17.35■□□□□ 0.37
VTI1A-209ENST00000496445 EN2P19622 333 aaPredicted RBP17.35■□□□□ 0.37
VTI1A-209ENST00000496445 USP5P45974 858 aa17.35■□□□□ 0.37
VTI1A-209ENST00000496445 PRKCZQ05513 592 aa17.35■□□□□ 0.37
VTI1A-209ENST00000496445 TTF1Q15361 905 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms