RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 POLA2Q14181 598 aa10.31□□□□□ -0.76
HPS4-217ENST00000496385 SLC4A10Q6U841 1118 aa10.31□□□□□ -0.76
HPS4-217ENST00000496385 CTAGE6Q86UF2 777 aa10.31□□□□□ -0.76
HPS4-217ENST00000496385 CTAGE4Q8IX94 777 aa10.31□□□□□ -0.76
HPS4-217ENST00000496385 ZKSCAN4Q969J2 545 aaPredicted RBP10.31□□□□□ -0.76
HPS4-217ENST00000496385 NAA15Q9BXJ9 866 aaKnown RBP10.31□□□□□ -0.76
HPS4-217ENST00000496385 RBM8AQ9Y5S9 174 aaKnown RBP10.31□□□□□ -0.76
HPS4-217ENST00000496385 ERVV-2B6SEH9 535 aa10.31□□□□□ -0.76
HPS4-217ENST00000496385 KIF5CO60282 957 aa10.31□□□□□ -0.76
HPS4-217ENST00000496385 SERPINC1P01008 464 aa10.31□□□□□ -0.76
HPS4-217ENST00000496385 SLC3A2P08195 630 aaKnown RBP10.31□□□□□ -0.76
HPS4-217ENST00000496385 CCDC175P0C221 793 aa10.31□□□□□ -0.76
HPS4-217ENST00000496385 BAG6P46379 1132 aa10.31□□□□□ -0.76
HPS4-217ENST00000496385 TOB2Q14106 344 aaPredicted RBP10.31□□□□□ -0.76
HPS4-217ENST00000496385 PROM2Q8N271 834 aa10.31□□□□□ -0.76
HPS4-217ENST00000496385 SMARCC2Q8TAQ2 1214 aa10.31□□□□□ -0.76
HPS4-217ENST00000496385 MYO1AQ9UBC5 1043 aa10.31□□□□□ -0.76
HPS4-217ENST00000496385 GGA2Q9UJY4 613 aa10.31□□□□□ -0.76
HPS4-217ENST00000496385 ODF2LQ9ULJ1 636 aa10.31□□□□□ -0.76
HPS4-217ENST00000496385 LRRIQ3A6PVS8 624 aaPredicted RBP10.3□□□□□ -0.76
HPS4-217ENST00000496385 KIAA0754O94854 1291 aa10.3□□□□□ -0.76
HPS4-217ENST00000496385 VSNL1P62760 191 aa10.3□□□□□ -0.76
HPS4-217ENST00000496385 MYL5Q02045 173 aa10.3□□□□□ -0.76
HPS4-217ENST00000496385 DRP2Q13474 957 aa10.3□□□□□ -0.76
HPS4-217ENST00000496385 FAM177A1Q8N128 213 aaPredicted RBP10.3□□□□□ -0.76
HPS4-217ENST00000496385 PALLDQ8WX93 1383 aa10.3□□□□□ -0.76
HPS4-217ENST00000496385 BTBD11A6QL63 1104 aa10.3□□□□□ -0.76
HPS4-217ENST00000496385 SLC27A2O14975 620 aa10.3□□□□□ -0.76
HPS4-217ENST00000496385 EIF3HO15372 352 aaKnown RBP eCLIP10.3□□□□□ -0.768e-6■□□□□ 10.6
HPS4-217ENST00000496385 SMTNP53814 917 aa10.3□□□□□ -0.76
HPS4-217ENST00000496385 BIRC2Q13490 618 aa10.3□□□□□ -0.76
HPS4-217ENST00000496385 CFAP100Q494V2 611 aa10.3□□□□□ -0.76
HPS4-217ENST00000496385 CPLX2Q6PUV4 134 aaKnown RBP10.3□□□□□ -0.76
HPS4-217ENST00000496385 SMIM5Q71RC9 77 aa10.3□□□□□ -0.76
HPS4-217ENST00000496385 IGSF22Q8N9C0 903 aa10.3□□□□□ -0.76
HPS4-217ENST00000496385 N4BP2L2Q92802 583 aaPredicted RBP10.3□□□□□ -0.76
HPS4-217ENST00000496385 EVI5LQ96CN4 794 aa10.3□□□□□ -0.76
HPS4-217ENST00000496385 FAM210AQ96ND0 272 aa10.3□□□□□ -0.76
HPS4-217ENST00000496385 LRRC4BQ9NT99 713 aa10.3□□□□□ -0.76
HPS4-217ENST00000496385 CAPN7Q9Y6W3 813 aa10.3□□□□□ -0.76
HPS4-217ENST00000496385 CEMIPQ8WUJ3 1361 aa10.29□□□□□ -0.76
HPS4-217ENST00000496385 ZEB2O60315 1214 aa10.29□□□□□ -0.76
HPS4-217ENST00000496385 PHACTR2O75167 634 aa10.29□□□□□ -0.76
HPS4-217ENST00000496385 GRIK3Q13003 919 aa10.29□□□□□ -0.76
HPS4-217ENST00000496385 TXNRD1Q16881 649 aa10.29□□□□□ -0.76
HPS4-217ENST00000496385 CLIC6Q96NY7 704 aa10.29□□□□□ -0.76
HPS4-217ENST00000496385 NBPF3Q9H094 633 aa10.29□□□□□ -0.76
HPS4-217ENST00000496385 RTEL1Q9NZ71 1219 aa10.29□□□□□ -0.76
HPS4-217ENST00000496385 TARSL2A2RTX5 802 aaKnown RBP10.29□□□□□ -0.76
HPS4-217ENST00000496385 CTAGE9A4FU28 777 aa10.29□□□□□ -0.76
HPS4-217ENST00000496385 MEFVO15553 781 aaPredicted RBP10.29□□□□□ -0.76
HPS4-217ENST00000496385 NEBLO76041 1014 aa10.29□□□□□ -0.76
HPS4-217ENST00000496385 MAP4K4O95819 1239 aaPredicted RBP10.29□□□□□ -0.76
HPS4-217ENST00000496385 LMOD1P29536 600 aaPredicted RBP10.29□□□□□ -0.76
HPS4-217ENST00000496385 ME1P48163 572 aa10.29□□□□□ -0.76
HPS4-217ENST00000496385 SLC8A3P57103 927 aa10.29□□□□□ -0.76
HPS4-217ENST00000496385 ISM2Q6H9L7 571 aa10.29□□□□□ -0.76
HPS4-217ENST00000496385 IQCA1Q86XH1 822 aa10.29□□□□□ -0.76
HPS4-217ENST00000496385 OTUD6BQ8N6M0 293 aa10.29□□□□□ -0.76
HPS4-217ENST00000496385 CCDC148Q8NFR7 591 aa10.29□□□□□ -0.76
HPS4-217ENST00000496385 BCAS4Q8TDM0 211 aa10.29□□□□□ -0.76
HPS4-217ENST00000496385 GPATCH3Q96I76 525 aa10.29□□□□□ -0.76
HPS4-217ENST00000496385 CAMKK2Q96RR4 588 aa10.29□□□□□ -0.76
HPS4-217ENST00000496385 CAPS2Q9BXY5 557 aa10.29□□□□□ -0.76
HPS4-217ENST00000496385 HSD3B7Q9H2F3 369 aa10.29□□□□□ -0.76
HPS4-217ENST00000496385 IL1RAPL2Q9NP60 686 aa10.29□□□□□ -0.76
HPS4-217ENST00000496385 HPCAL4Q9UM19 191 aa10.29□□□□□ -0.76
HPS4-217ENST00000496385 PRAMEF22A3QJZ6 481 aa10.28□□□□□ -0.76
HPS4-217ENST00000496385 RTN2O75298 545 aa10.28□□□□□ -0.76
HPS4-217ENST00000496385 KCNG4Q8TDN1 519 aa10.28□□□□□ -0.76
HPS4-217ENST00000496385 COG1Q8WTW3 980 aa10.28□□□□□ -0.76
HPS4-217ENST00000496385 ITFG2Q969R8 447 aa10.28□□□□□ -0.76
HPS4-217ENST00000496385 RPGRIP1Q96KN7 1286 aa10.28□□□□□ -0.76
HPS4-217ENST00000496385 SLC4A9Q96Q91 983 aa10.28□□□□□ -0.76
HPS4-217ENST00000496385 PANX2Q96RD6 677 aa10.28□□□□□ -0.76
HPS4-217ENST00000496385 SH3GL3Q99963 347 aa10.28□□□□□ -0.76
HPS4-217ENST00000496385 STK31Q9BXU1 1019 aa10.28□□□□□ -0.76
HPS4-217ENST00000496385 IRF6O14896 467 aa10.28□□□□□ -0.76
HPS4-217ENST00000496385 YEATS4O95619 227 aa10.28□□□□□ -0.76
HPS4-217ENST00000496385 ADCY2Q08462 1091 aa10.28□□□□□ -0.76
HPS4-217ENST00000496385 STIM1Q13586 685 aa10.28□□□□□ -0.76
HPS4-217ENST00000496385 ARMC2Q8NEN0 867 aa10.28□□□□□ -0.76
HPS4-217ENST00000496385 USP28Q96RU2 1077 aa10.28□□□□□ -0.76
HPS4-217ENST00000496385 BATF3Q9NR55 127 aa10.28□□□□□ -0.76
HPS4-217ENST00000496385 PUF60Q9UHX1 559 aaKnown RBP10.28□□□□□ -0.76
HPS4-217ENST00000496385 TUBE1Q9UJT0 475 aa10.28□□□□□ -0.76
HPS4-217ENST00000496385 CCNL1Q9UK58 526 aaPredicted RBP10.28□□□□□ -0.76
HPS4-217ENST00000496385 PCDHA7Q9UN72 937 aa10.28□□□□□ -0.76
HPS4-217ENST00000496385 PFKFB2O60825 505 aa10.27□□□□□ -0.76
HPS4-217ENST00000496385 SURF6O75683 361 aaKnown RBP10.27□□□□□ -0.76
HPS4-217ENST00000496385 UBTFL1P0CB47 393 aaPredicted RBP10.27□□□□□ -0.76
HPS4-217ENST00000496385 SPECC1LQ69YQ0 1117 aa10.27□□□□□ -0.76
HPS4-217ENST00000496385 TC2NQ8N9U0 490 aa10.27□□□□□ -0.76
HPS4-217ENST00000496385 ZNF496Q96IT1 587 aaPredicted RBP10.27□□□□□ -0.76
HPS4-217ENST00000496385 PLEKHA4Q9H4M7 779 aa10.27□□□□□ -0.76
HPS4-217ENST00000496385 KAT14Q9H8E8 782 aa10.27□□□□□ -0.76
HPS4-217ENST00000496385 SUGCTQ9HAC7 445 aa10.27□□□□□ -0.76
HPS4-217ENST00000496385 KLC4Q9NSK0 619 aa10.27□□□□□ -0.76
HPS4-217ENST00000496385 LOC102724428A0A0B4J2F2 783 aa10.27□□□□□ -0.77
HPS4-217ENST00000496385 GOLGA8KD6RF30 607 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms