RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 PPM1EQ8WY54 764 aa12.24□□□□□ -0.45
SMARCAL1-213ENST00000496037 PLA2G12BQ9BX93 195 aa12.24□□□□□ -0.45
SMARCAL1-213ENST00000496037 SENP6Q9GZR1 1112 aaPredicted RBP12.24□□□□□ -0.45
SMARCAL1-213ENST00000496037 ZHX2Q9Y6X8 837 aa12.24□□□□□ -0.45
SMARCAL1-213ENST00000496037 PLIN1O60240 522 aa12.23□□□□□ -0.45
SMARCAL1-213ENST00000496037 HIBADHP31937 336 aaKnown RBP12.23□□□□□ -0.45
SMARCAL1-213ENST00000496037 GRIN2CQ14957 1233 aa12.23□□□□□ -0.45
SMARCAL1-213ENST00000496037 CWF19L2Q2TBE0 894 aaKnown RBP12.23□□□□□ -0.45
SMARCAL1-213ENST00000496037 TBC1D22AQ8WUA7 517 aa12.23□□□□□ -0.45
SMARCAL1-213ENST00000496037 ZDHHC15Q96MV8 337 aa12.23□□□□□ -0.45
SMARCAL1-213ENST00000496037 A0A1B0GUL6 1792 aa12.23□□□□□ -0.45
SMARCAL1-213ENST00000496037 XIRP2A4UGR9 3374 aa12.22□□□□□ -0.45
SMARCAL1-213ENST00000496037 MAST3O60307 1309 aa12.22□□□□□ -0.45
SMARCAL1-213ENST00000496037 BDP1A6H8Y1 2624 aa12.22□□□□□ -0.45
SMARCAL1-213ENST00000496037 NEURL1BA8MQ27 555 aa12.22□□□□□ -0.45
SMARCAL1-213ENST00000496037 H7C1W4 665 aa12.22□□□□□ -0.45
SMARCAL1-213ENST00000496037 ZKSCAN1P17029 563 aaPredicted RBP12.22□□□□□ -0.45
SMARCAL1-213ENST00000496037 CYP2B6P20813 491 aa12.22□□□□□ -0.45
SMARCAL1-213ENST00000496037 GYG1P46976 350 aa12.22□□□□□ -0.45
SMARCAL1-213ENST00000496037 GCLCP48506 637 aaPredicted RBP12.22□□□□□ -0.45
SMARCAL1-213ENST00000496037 CHAF1AQ13111 956 aaPredicted RBP12.22□□□□□ -0.45
SMARCAL1-213ENST00000496037 IFIT5Q13325 482 aaKnown RBP12.22□□□□□ -0.45
SMARCAL1-213ENST00000496037 KSR2Q6VAB6 950 aa12.22□□□□□ -0.45
SMARCAL1-213ENST00000496037 ALYREFQ86V81 257 aaKnown RBP12.22□□□□□ -0.45
SMARCAL1-213ENST00000496037 SCYL3Q8IZE3 742 aa12.22□□□□□ -0.45
SMARCAL1-213ENST00000496037 FAM151AQ8WW52 585 aa12.22□□□□□ -0.45
SMARCAL1-213ENST00000496037 GAS2L1Q99501 681 aaPredicted RBP12.22□□□□□ -0.45
SMARCAL1-213ENST00000496037 PRDM5Q9NQX1 630 aaPredicted RBP12.22□□□□□ -0.45
SMARCAL1-213ENST00000496037 AGTPBP1Q9UPW5 1226 aa12.22□□□□□ -0.45
SMARCAL1-213ENST00000496037 CHMP3Q9Y3E7 222 aa12.22□□□□□ -0.45
SMARCAL1-213ENST00000496037 LTBP2Q14767 1821 aa12.22□□□□□ -0.45
SMARCAL1-213ENST00000496037 PIEZO1Q92508 2521 aa12.21□□□□□ -0.45
SMARCAL1-213ENST00000496037 PI4KAP2A4QPH2 592 aa12.21□□□□□ -0.45
SMARCAL1-213ENST00000496037 FRAT2O75474 233 aaPredicted RBP12.21□□□□□ -0.45
SMARCAL1-213ENST00000496037 CSF1RP07333 972 aa12.21□□□□□ -0.45
SMARCAL1-213ENST00000496037 RTP1P59025 263 aa12.21□□□□□ -0.45
SMARCAL1-213ENST00000496037 TAF7LQ5H9L4 462 aa12.21□□□□□ -0.45
SMARCAL1-213ENST00000496037 VPS37DQ86XT2 251 aa12.21□□□□□ -0.45
SMARCAL1-213ENST00000496037 TRMT44Q8IYL2 757 aaKnown RBP12.21□□□□□ -0.45
SMARCAL1-213ENST00000496037 PI4KAP1Q8N8J0 262 aa12.21□□□□□ -0.45
SMARCAL1-213ENST00000496037 SOCS4Q8WXH5 440 aa12.21□□□□□ -0.45
SMARCAL1-213ENST00000496037 RNPC3Q96LT9 517 aaKnown RBP12.21□□□□□ -0.45
SMARCAL1-213ENST00000496037 GJD2Q9UKL4 321 aa12.21□□□□□ -0.45
SMARCAL1-213ENST00000496037 TRIM75PA6NK02 468 aa12.2□□□□□ -0.46
SMARCAL1-213ENST00000496037 ST18O60284 1047 aa12.2□□□□□ -0.46
SMARCAL1-213ENST00000496037 PTPRAP18433 802 aa12.2□□□□□ -0.46
SMARCAL1-213ENST00000496037 TCP10Q12799 353 aa12.2□□□□□ -0.46
SMARCAL1-213ENST00000496037 GRIK5Q16478 980 aa12.2□□□□□ -0.46
SMARCAL1-213ENST00000496037 APOBEC3HQ6NTF7 200 aaKnown RBP12.2□□□□□ -0.46
SMARCAL1-213ENST00000496037 NUDT12Q9BQG2 462 aa12.2□□□□□ -0.46
SMARCAL1-213ENST00000496037 LRFN3Q9BTN0 628 aa12.2□□□□□ -0.46
SMARCAL1-213ENST00000496037 CHMP4AQ9BY43 222 aa12.2□□□□□ -0.46
SMARCAL1-213ENST00000496037 SLC24A3Q9HC58 644 aa12.2□□□□□ -0.46
SMARCAL1-213ENST00000496037 CNNM1Q9NRU3 951 aa12.2□□□□□ -0.46
SMARCAL1-213ENST00000496037 MBIPQ9NS73 344 aa12.2□□□□□ -0.46
SMARCAL1-213ENST00000496037 ATP11BQ9Y2G3 1177 aa12.2□□□□□ -0.46
SMARCAL1-213ENST00000496037 AFG3L2Q9Y4W6 797 aa12.2□□□□□ -0.46
SMARCAL1-213ENST00000496037 ELL2O00472 640 aaPredicted RBP12.19□□□□□ -0.46
SMARCAL1-213ENST00000496037 XRCC5P13010 732 aaKnown RBP12.19□□□□□ -0.46
SMARCAL1-213ENST00000496037 DNAJB2P25686 324 aa12.19□□□□□ -0.46
SMARCAL1-213ENST00000496037 CCND3P30281 292 aaPredicted RBP12.19□□□□□ -0.46
SMARCAL1-213ENST00000496037 CACNB2Q08289 660 aaPredicted RBP12.19□□□□□ -0.46
SMARCAL1-213ENST00000496037 UBE4AQ14139 1066 aa12.19□□□□□ -0.46
SMARCAL1-213ENST00000496037 PDE3AQ14432 1141 aa12.19□□□□□ -0.46
SMARCAL1-213ENST00000496037 TMEM31Q5JXX7 168 aa12.19□□□□□ -0.46
SMARCAL1-213ENST00000496037 AKNAD1Q5T1N1 836 aa12.19□□□□□ -0.46
SMARCAL1-213ENST00000496037 LCE2DQ5TA82 110 aaPredicted RBP12.19□□□□□ -0.46
SMARCAL1-213ENST00000496037 TMC2Q8TDI7 906 aa12.19□□□□□ -0.46
SMARCAL1-213ENST00000496037 BADQ92934 168 aa12.19□□□□□ -0.46
SMARCAL1-213ENST00000496037 MYH16Q9H6N6 1097 aa12.19□□□□□ -0.46
SMARCAL1-213ENST00000496037 PABPC4Q13310 644 aaKnown RBP eCLIP12.18□□□□□ -0.46
SMARCAL1-213ENST00000496037 GCKRQ14397 625 aa12.18□□□□□ -0.46
SMARCAL1-213ENST00000496037 TREML2Q5T2D2 321 aa12.18□□□□□ -0.46
SMARCAL1-213ENST00000496037 CCDC30Q5VVM6 783 aa12.18□□□□□ -0.46
SMARCAL1-213ENST00000496037 LDHAL6AQ6ZMR3 332 aa12.18□□□□□ -0.46
SMARCAL1-213ENST00000496037 KCNV2Q8TDN2 545 aa12.18□□□□□ -0.46
SMARCAL1-213ENST00000496037 FAM84BQ96KN1 310 aaPredicted RBP12.18□□□□□ -0.46
SMARCAL1-213ENST00000496037 NECAB3Q96P71 396 aaPredicted RBP12.18□□□□□ -0.46
SMARCAL1-213ENST00000496037 MRIQ9BWK5 157 aa12.18□□□□□ -0.46
SMARCAL1-213ENST00000496037 ZNF576Q9H609 170 aa12.18□□□□□ -0.46
SMARCAL1-213ENST00000496037 WDR70Q9NW82 654 aa12.18□□□□□ -0.46
SMARCAL1-213ENST00000496037 IQSEC3Q9UPP2 1182 aaPredicted RBP12.18□□□□□ -0.46
SMARCAL1-213ENST00000496037 LRRFIP2Q9Y608 721 aaKnown RBP12.18□□□□□ -0.46
SMARCAL1-213ENST00000496037 DOCK3Q8IZD9 2030 aa12.18□□□□□ -0.46
SMARCAL1-213ENST00000496037 POTEEQ6S8J3 1075 aa12.17□□□□□ -0.46
SMARCAL1-213ENST00000496037 HHIPL2Q6UWX4 724 aa12.17□□□□□ -0.46
SMARCAL1-213ENST00000496037 TIFAQ96CG3 184 aa12.17□□□□□ -0.46
SMARCAL1-213ENST00000496037 SUGT1Q9Y2Z0 365 aa12.17□□□□□ -0.46
SMARCAL1-213ENST00000496037 NCOR1O75376 2440 aa12.16□□□□□ -0.46
SMARCAL1-213ENST00000496037 C2orf72A6NCS6 295 aa12.16□□□□□ -0.46
SMARCAL1-213ENST00000496037 POTEMA6NI47 508 aa12.16□□□□□ -0.46
SMARCAL1-213ENST00000496037 DNM1LO00429 736 aa12.16□□□□□ -0.46
SMARCAL1-213ENST00000496037 CASP7P55210 303 aa12.16□□□□□ -0.46
SMARCAL1-213ENST00000496037 CCDC57Q2TAC2 916 aa12.16□□□□□ -0.46
SMARCAL1-213ENST00000496037 PROCA1Q8NCQ7 364 aaPredicted RBP12.16□□□□□ -0.46
SMARCAL1-213ENST00000496037 PHF20L1A8MW92 1017 aa12.15□□□□□ -0.46
SMARCAL1-213ENST00000496037 MSCO60682 206 aa12.15□□□□□ -0.46
SMARCAL1-213ENST00000496037 HOXB3P14651 431 aaPredicted RBP12.15□□□□□ -0.46
SMARCAL1-213ENST00000496037 RGS2P41220 211 aa12.15□□□□□ -0.46
SMARCAL1-213ENST00000496037 NFIAQ12857 509 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms