RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 MFSD6Q6ZSS7 791 aa12.66□□□□□ -0.38
ECHDC3-204ENST00000495787 SAPCD2Q86UD0 394 aa12.66□□□□□ -0.38
ECHDC3-204ENST00000495787 NIM1KQ8IY84 436 aa12.66□□□□□ -0.38
ECHDC3-204ENST00000495787 CERS5Q8N5B7 392 aa12.66□□□□□ -0.38
ECHDC3-204ENST00000495787 DCP1AQ9NPI6 582 aaPredicted RBP12.66□□□□□ -0.38
ECHDC3-204ENST00000495787 ADARB2Q9NS39 739 aaKnown RBP12.66□□□□□ -0.38
ECHDC3-204ENST00000495787 FOCADQ5VW36 1801 aa12.66□□□□□ -0.38
ECHDC3-204ENST00000495787 USP17L3A6NCW0 530 aa12.65□□□□□ -0.38
ECHDC3-204ENST00000495787 USP17L4A6NCW7 530 aa12.65□□□□□ -0.38
ECHDC3-204ENST00000495787 MINDY4BA8MYZ0 360 aa12.65□□□□□ -0.38
ECHDC3-204ENST00000495787 CELF2O95319 508 aaKnown RBP12.65□□□□□ -0.38
ECHDC3-204ENST00000495787 PCP11498 1178 aaKnown RBP12.65□□□□□ -0.38
ECHDC3-204ENST00000495787 USP5P45974 858 aa12.65□□□□□ -0.38
ECHDC3-204ENST00000495787 ANTXR2P58335 489 aa12.65□□□□□ -0.38
ECHDC3-204ENST00000495787 CTR9Q6PD62 1173 aa12.65□□□□□ -0.38
ECHDC3-204ENST00000495787 USP17L1Q7RTZ2 530 aa12.65□□□□□ -0.38
ECHDC3-204ENST00000495787 CCDC83Q8IWF9 413 aa12.65□□□□□ -0.38
ECHDC3-204ENST00000495787 SH3RF3Q8TEJ3 882 aaPredicted RBP12.65□□□□□ -0.38
ECHDC3-204ENST00000495787 BRF1Q92994 677 aa12.65□□□□□ -0.38
ECHDC3-204ENST00000495787 MRIQ9BWK5 157 aa12.65□□□□□ -0.38
ECHDC3-204ENST00000495787 LRRC2Q9BYS8 371 aa12.65□□□□□ -0.38
ECHDC3-204ENST00000495787 GPRC5DQ9NZD1 345 aa12.65□□□□□ -0.38
ECHDC3-204ENST00000495787 ARPP21Q9UBL0 812 aaPredicted RBP12.65□□□□□ -0.38
ECHDC3-204ENST00000495787 TTF2Q9UNY4 1162 aaKnown RBP12.65□□□□□ -0.38
ECHDC3-204ENST00000495787 NEDD4P46934 1319 aa12.64□□□□□ -0.39
ECHDC3-204ENST00000495787 B4E1Z4 1266 aa12.64□□□□□ -0.39
ECHDC3-204ENST00000495787 USP17L12C9JPN9 530 aa12.64□□□□□ -0.39
ECHDC3-204ENST00000495787 USP17L21D6R901 530 aa12.64□□□□□ -0.39
ECHDC3-204ENST00000495787 FGRP09769 529 aa12.64□□□□□ -0.39
ECHDC3-204ENST00000495787 EVCP57679 992 aa12.64□□□□□ -0.39
ECHDC3-204ENST00000495787 ST3GAL1Q11201 340 aa12.64□□□□□ -0.39
ECHDC3-204ENST00000495787 RAB3GAP1Q15042 981 aa12.64□□□□□ -0.39
ECHDC3-204ENST00000495787 DACT2Q5SW24 774 aa12.64□□□□□ -0.39
ECHDC3-204ENST00000495787 HHIPL2Q6UWX4 724 aa12.64□□□□□ -0.39
ECHDC3-204ENST00000495787 CYB5R4Q7L1T6 521 aa12.64□□□□□ -0.39
ECHDC3-204ENST00000495787 CHST3Q7LGC8 479 aa12.64□□□□□ -0.39
ECHDC3-204ENST00000495787 CHMP4CQ96CF2 233 aa12.64□□□□□ -0.39
ECHDC3-204ENST00000495787 ZNF274Q96GC6 653 aaPredicted RBP12.64□□□□□ -0.39
ECHDC3-204ENST00000495787 TMEM87BQ96K49 555 aa12.64□□□□□ -0.39
ECHDC3-204ENST00000495787 MTA3Q9BTC8 594 aa12.64□□□□□ -0.39
ECHDC3-204ENST00000495787 DAGLAQ9Y4D2 1042 aa12.64□□□□□ -0.39
ECHDC3-204ENST00000495787 TACC3Q9Y6A5 838 aa12.64□□□□□ -0.39
ECHDC3-204ENST00000495787 MYH1P12882 1939 aa12.64□□□□□ -0.39
ECHDC3-204ENST00000495787 ECM29Q5VYK3 1845 aa12.63□□□□□ -0.39
ECHDC3-204ENST00000495787 PFKFB2O60825 505 aa12.63□□□□□ -0.39
ECHDC3-204ENST00000495787 SLC3A2P08195 630 aaKnown RBP12.63□□□□□ -0.39
ECHDC3-204ENST00000495787 RHBDL3P58872 404 aa12.63□□□□□ -0.39
ECHDC3-204ENST00000495787 HDLBPQ00341 1268 aaKnown RBP12.63□□□□□ -0.39
ECHDC3-204ENST00000495787 APOBRQ0VD83 1088 aa12.63□□□□□ -0.39
ECHDC3-204ENST00000495787 DGKZQ13574 1117 aa12.63□□□□□ -0.39
ECHDC3-204ENST00000495787 TEX11Q8IYF3 940 aa12.63□□□□□ -0.39
ECHDC3-204ENST00000495787 NECAB1Q8N987 351 aa12.63□□□□□ -0.39
ECHDC3-204ENST00000495787 GTF3C6Q969F1 213 aa12.63□□□□□ -0.39
ECHDC3-204ENST00000495787 MXD3Q9BW11 206 aa12.63□□□□□ -0.39
ECHDC3-204ENST00000495787 KCNQ5Q9NR82 932 aa12.63□□□□□ -0.39
ECHDC3-204ENST00000495787 SMC3Q9UQE7 1217 aa12.63□□□□□ -0.39
ECHDC3-204ENST00000495787 DDX60LQ5H9U9 1706 aaKnown RBP12.62□□□□□ -0.39
ECHDC3-204ENST00000495787 PDE4DIPQ5VU43 2346 aa12.62□□□□□ -0.39
ECHDC3-204ENST00000495787 YDJCA8MPS7 323 aa12.62□□□□□ -0.39
ECHDC3-204ENST00000495787 F8W031 263 aaPredicted RBP12.62□□□□□ -0.39
ECHDC3-204ENST00000495787 SH2B2O14492 632 aaPredicted RBP12.62□□□□□ -0.39
ECHDC3-204ENST00000495787 KDM4AO75164 1064 aa12.62□□□□□ -0.39
ECHDC3-204ENST00000495787 NT5C2P49902 561 aa12.62□□□□□ -0.39
ECHDC3-204ENST00000495787 AMOTL1Q8IY63 956 aa12.62□□□□□ -0.39
ECHDC3-204ENST00000495787 TGFBRAP1Q8WUH2 860 aa12.62□□□□□ -0.39
ECHDC3-204ENST00000495787 TEKT1Q969V4 418 aa12.62□□□□□ -0.39
ECHDC3-204ENST00000495787 GLIS2Q9BZE0 524 aaPredicted RBP12.62□□□□□ -0.39
ECHDC3-204ENST00000495787 INCENPQ9NQS7 918 aa12.62□□□□□ -0.39
ECHDC3-204ENST00000495787 MCM9Q9NXL9 1143 aa12.62□□□□□ -0.39
ECHDC3-204ENST00000495787 ZSWIM5Q9P217 1185 aa12.62□□□□□ -0.39
ECHDC3-204ENST00000495787 PGAP2Q9UHJ9 254 aa12.62□□□□□ -0.39
ECHDC3-204ENST00000495787 ZNRF3Q9ULT6 936 aa12.62□□□□□ -0.39
ECHDC3-204ENST00000495787 ANGEL1Q9UNK9 670 aaKnown RBP12.62□□□□□ -0.39
ECHDC3-204ENST00000495787 CASP8AP2Q9UKL3 1982 aa12.61□□□□□ -0.39
ECHDC3-204ENST00000495787 CYP2D7A0A087X1C5 515 aa12.61□□□□□ -0.39
ECHDC3-204ENST00000495787 ORC4O43929 436 aa12.61□□□□□ -0.39
ECHDC3-204ENST00000495787 PDIA3P30101 505 aaKnown RBP12.61□□□□□ -0.39
ECHDC3-204ENST00000495787 LIFRP42702 1097 aa12.61□□□□□ -0.39
ECHDC3-204ENST00000495787 CXCL9Q07325 125 aa12.61□□□□□ -0.39
ECHDC3-204ENST00000495787 STK3Q13188 491 aa12.61□□□□□ -0.39
ECHDC3-204ENST00000495787 NOGQ13253 232 aa12.61□□□□□ -0.39
ECHDC3-204ENST00000495787 NFKBIBQ15653 356 aa12.61□□□□□ -0.39
ECHDC3-204ENST00000495787 RRP12Q5JTH9 1297 aaKnown RBP12.61□□□□□ -0.39
ECHDC3-204ENST00000495787 C12orf60Q5U649 245 aa12.61□□□□□ -0.39
ECHDC3-204ENST00000495787 CIAPIN1Q6FI81 312 aa12.61□□□□□ -0.39
ECHDC3-204ENST00000495787 NKX2-3Q8TAU0 364 aa12.61□□□□□ -0.39
ECHDC3-204ENST00000495787 IGDCC4Q8TDY8 1250 aa12.61□□□□□ -0.39
ECHDC3-204ENST00000495787 ZC3H15Q8WU90 426 aaKnown RBP12.61□□□□□ -0.39
ECHDC3-204ENST00000495787 ESR2Q92731 530 aa12.61□□□□□ -0.39
ECHDC3-204ENST00000495787 LLPHQ9BRT6 129 aaKnown RBP12.61□□□□□ -0.39
ECHDC3-204ENST00000495787 TOMM22Q9NS69 142 aa12.61□□□□□ -0.39
ECHDC3-204ENST00000495787 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.61□□□□□ -0.39
ECHDC3-204ENST00000495787 MYO3BQ8WXR4 1341 aa12.61□□□□□ -0.39
ECHDC3-204ENST00000495787 ROBO3Q96MS0 1386 aa12.6□□□□□ -0.39
ECHDC3-204ENST00000495787 IFIT3O14879 490 aaKnown RBP12.6□□□□□ -0.39
ECHDC3-204ENST00000495787 TNRC18O15417 2968 aaPredicted RBP12.6□□□□□ -0.39
ECHDC3-204ENST00000495787 USP17L8P0C7I0 530 aa12.6□□□□□ -0.39
ECHDC3-204ENST00000495787 CYP2D6P10635 497 aa12.6□□□□□ -0.39
ECHDC3-204ENST00000495787 PDIA4P13667 645 aaKnown RBP12.6□□□□□ -0.39
ECHDC3-204ENST00000495787 GJB2P29033 226 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms