RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 CRHR2Q13324 411 aa21.34■■□□□ 1.01
HDAC4-211ENST00000494800 TAF1CQ15572 869 aaPredicted RBP21.34■■□□□ 1.01
HDAC4-211ENST00000494800 GCC1Q96CN9 775 aa21.34■■□□□ 1.01
HDAC4-211ENST00000494800 CRNKL1Q9BZJ0 848 aaKnown RBP21.34■■□□□ 1.01
HDAC4-211ENST00000494800 MCOLN1Q9GZU1 580 aa21.34■■□□□ 1.01
HDAC4-211ENST00000494800 KCNH4Q9UQ05 1017 aa21.34■■□□□ 1.01
HDAC4-211ENST00000494800 ZHX2Q9Y6X8 837 aa21.34■■□□□ 1.01
HDAC4-211ENST00000494800 HDAC1Q13547 482 aaPredicted RBP21.33■■□□□ 1.01
HDAC4-211ENST00000494800 EDC3Q96F86 508 aaKnown RBP21.33■■□□□ 1.01
HDAC4-211ENST00000494800 ABHD8Q96I13 439 aa21.33■■□□□ 1.01
HDAC4-211ENST00000494800 TBC1D2Q9BYX2 928 aa21.33■■□□□ 1.01
HDAC4-211ENST00000494800 SAP30BPQ9UHR5 308 aaKnown RBP21.33■■□□□ 1.01
HDAC4-211ENST00000494800 PALD1Q9ULE6 856 aa21.33■■□□□ 1.01
HDAC4-211ENST00000494800 CASP8AP2Q9UKL3 1982 aa21.32■■□□□ 1
HDAC4-211ENST00000494800 FAM196BA6NMK8 535 aa21.32■■□□□ 1
HDAC4-211ENST00000494800 ERC2O15083 957 aa21.32■■□□□ 1
HDAC4-211ENST00000494800 PKN2Q16513 984 aaKnown RBP21.32■■□□□ 1
HDAC4-211ENST00000494800 TTC6Q86TZ1 520 aa21.32■■□□□ 1
HDAC4-211ENST00000494800 FAM43AQ8N2R8 423 aa21.32■■□□□ 1
HDAC4-211ENST00000494800 RIOK1Q9BRS2 568 aaKnown RBP21.32■■□□□ 1
HDAC4-211ENST00000494800 MYO5AQ9Y4I1 1855 aaKnown RBP21.32■■□□□ 1
HDAC4-211ENST00000494800 TTC41PQ6P2S7 1318 aa21.31■■□□□ 1
HDAC4-211ENST00000494800 BTBD19C9JJ37 291 aa21.31■■□□□ 1
HDAC4-211ENST00000494800 ADD2P35612 726 aa21.31■■□□□ 1
HDAC4-211ENST00000494800 FASTKD5Q7L8L6 764 aaKnown RBP21.31■■□□□ 1
HDAC4-211ENST00000494800 ANKRD23Q86SG2 305 aa21.31■■□□□ 1
HDAC4-211ENST00000494800 R3HDMLQ9H3Y0 253 aa21.31■■□□□ 1
HDAC4-211ENST00000494800 TCRBV5S4A2TA0A5A2 114 aa21.3■■□□□ 1
HDAC4-211ENST00000494800 SLURP2P0DP57 97 aa21.3■■□□□ 1
HDAC4-211ENST00000494800 CAP2P40123 477 aa21.3■■□□□ 1
HDAC4-211ENST00000494800 UBE3CQ15386 1083 aa21.3■■□□□ 1
HDAC4-211ENST00000494800 LRRFIP1Q32MZ4 808 aaKnown RBP21.3■■□□□ 1
HDAC4-211ENST00000494800 ERO1AQ96HE7 468 aa21.3■■□□□ 1
HDAC4-211ENST00000494800 RWDD1Q9H446 243 aaPredicted RBP21.3■■□□□ 1
HDAC4-211ENST00000494800 AFG3L2Q9Y4W6 797 aa21.3■■□□□ 1
HDAC4-211ENST00000494800 ARHGEF6Q15052 776 aa21.29■■□□□ 1
HDAC4-211ENST00000494800 ANKRD45Q5TZF3 282 aa21.29■■□□□ 1
HDAC4-211ENST00000494800 METTL16Q86W50 562 aaKnown RBP21.29■■□□□ 1
HDAC4-211ENST00000494800 DDRGK1Q96HY6 314 aa21.29■■□□□ 1
HDAC4-211ENST00000494800 AS3MTQ9HBK9 375 aa21.29■■□□□ 1
HDAC4-211ENST00000494800 GINM1Q9NU53 330 aa21.29■■□□□ 1
HDAC4-211ENST00000494800 SUPT16HQ9Y5B9 1047 aaKnown RBP21.29■■□□□ 1
HDAC4-211ENST00000494800 FOCADQ5VW36 1801 aa21.28■■□□□ 1
HDAC4-211ENST00000494800 A0A0G2JLL6 359 aaPredicted RBP21.28■■□□□ 1
HDAC4-211ENST00000494800 TRIM75PA6NK02 468 aa21.28■■□□□ 1
HDAC4-211ENST00000494800 GLRX3O76003 335 aaKnown RBP21.28■■□□□ 1
HDAC4-211ENST00000494800 POLR3DP05423 398 aaPredicted RBP21.28■■□□□ 1
HDAC4-211ENST00000494800 ASNSP08243 561 aa21.28■■□□□ 1
HDAC4-211ENST00000494800 SP3Q02447 781 aa21.28■■□□□ 1
HDAC4-211ENST00000494800 SLC4A8Q2Y0W8 1093 aa21.28■■□□□ 1
HDAC4-211ENST00000494800 PRRT2Q7Z6L0 340 aaPredicted RBP21.28■■□□□ 1
HDAC4-211ENST00000494800 EHD4Q9H223 541 aa21.28■■□□□ 1
HDAC4-211ENST00000494800 SERPINB13Q9UIV8 391 aa21.28■■□□□ 1
HDAC4-211ENST00000494800 DOCK1Q14185 1865 aa21.28■■□□□ 1
HDAC4-211ENST00000494800 USP17L5A8MUK1 530 aa21.27■■□□□ 1
HDAC4-211ENST00000494800 PDHXO00330 501 aa21.27■■□□□ 1
HDAC4-211ENST00000494800 MBD4O95243 580 aa21.27■■□□□ 1
HDAC4-211ENST00000494800 MX1P20591 662 aa21.27■■□□□ 1
HDAC4-211ENST00000494800 TSHZ3Q63HK5 1081 aa21.27■■□□□ 1
HDAC4-211ENST00000494800 AMOTL1Q8IY63 956 aa21.27■■□□□ 1
HDAC4-211ENST00000494800 LCORLQ8N3X6 602 aa21.27■■□□□ 1
HDAC4-211ENST00000494800 KBTBD3Q8NAB2 608 aa21.27■■□□□ 1
HDAC4-211ENST00000494800 MCM9Q9NXL9 1143 aa21.27■■□□□ 1
HDAC4-211ENST00000494800 TLR2O60603 784 aa21.26■□□□□ 0.99
HDAC4-211ENST00000494800 ZFYP08048 801 aaPredicted RBP21.26■□□□□ 0.99
HDAC4-211ENST00000494800 GADL1Q6ZQY3 521 aa21.26■□□□□ 0.99
HDAC4-211ENST00000494800 ZNF280CQ8ND82 737 aa21.26■□□□□ 0.99
HDAC4-211ENST00000494800 PARK7Q99497 189 aaKnown RBP21.26■□□□□ 0.99
HDAC4-211ENST00000494800 ARMT1Q9H993 441 aa21.26■□□□□ 0.99
HDAC4-211ENST00000494800 CCDC85CA6NKD9 419 aa21.25■□□□□ 0.99
HDAC4-211ENST00000494800 KIF22Q14807 665 aa21.25■□□□□ 0.99
HDAC4-211ENST00000494800 EXOC6Q8TAG9 804 aa21.25■□□□□ 0.99
HDAC4-211ENST00000494800 DNAJC18Q9H819 358 aa21.25■□□□□ 0.99
HDAC4-211ENST00000494800 ATP8A2Q9NTI2 1148 aa21.25■□□□□ 0.99
HDAC4-211ENST00000494800 CDK5RAP2Q96SN8 1893 aa21.24■□□□□ 0.99
HDAC4-211ENST00000494800 SPP2Q13103 211 aa21.24■□□□□ 0.99
HDAC4-211ENST00000494800 SDR42E1Q8WUS8 393 aa21.24■□□□□ 0.99
HDAC4-211ENST00000494800 DCP1AQ9NPI6 582 aaPredicted RBP21.24■□□□□ 0.99
HDAC4-211ENST00000494800 TAOK2Q9UL54 1235 aa21.24■□□□□ 0.99
HDAC4-211ENST00000494800 SLC45A1Q9Y2W3 748 aa21.24■□□□□ 0.99
HDAC4-211ENST00000494800 TRIM17Q9Y577 477 aa21.24■□□□□ 0.99
HDAC4-211ENST00000494800 MOGSQ13724 837 aa21.23■□□□□ 0.99
HDAC4-211ENST00000494800 CCDC84Q86UT8 332 aaPredicted RBP21.23■□□□□ 0.99
HDAC4-211ENST00000494800 PROCA1Q8NCQ7 364 aaPredicted RBP21.23■□□□□ 0.99
HDAC4-211ENST00000494800 CD99L2Q8TCZ2 262 aa21.23■□□□□ 0.99
HDAC4-211ENST00000494800 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.23■□□□□ 0.99
HDAC4-211ENST00000494800 RNF113AO15541 343 aaKnown RBP21.22■□□□□ 0.99
HDAC4-211ENST00000494800 GDF11O95390 407 aa21.22■□□□□ 0.99
HDAC4-211ENST00000494800 PABPC4Q13310 644 aaKnown RBP eCLIP21.22■□□□□ 0.99
HDAC4-211ENST00000494800 RRP1BQ14684 758 aaKnown RBP21.22■□□□□ 0.99
HDAC4-211ENST00000494800 CERKLQ49MI3 558 aaPredicted RBP21.22■□□□□ 0.99
HDAC4-211ENST00000494800 TATDN1Q6P1N9 297 aa21.22■□□□□ 0.99
HDAC4-211ENST00000494800 FBXO46Q6PJ61 603 aaPredicted RBP21.22■□□□□ 0.99
HDAC4-211ENST00000494800 PI4K2BQ8TCG2 481 aa21.22■□□□□ 0.99
HDAC4-211ENST00000494800 WDR18Q9BV38 432 aa21.22■□□□□ 0.99
HDAC4-211ENST00000494800 EFCC1Q9HA90 598 aa21.22■□□□□ 0.99
HDAC4-211ENST00000494800 CABP5Q9NP86 173 aa21.22■□□□□ 0.99
HDAC4-211ENST00000494800 PNMA3Q9UL41 463 aa21.22■□□□□ 0.99
HDAC4-211ENST00000494800 ZBTB21Q9ULJ3 1066 aa21.22■□□□□ 0.99
HDAC4-211ENST00000494800 AGTPBP1Q9UPW5 1226 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms