RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 CDKL5O76039 1030 aa12.4□□□□□ -0.43
PRPF4B-209ENST00000494674 SART3Q15020 963 aaKnown RBP12.4□□□□□ -0.43
PRPF4B-209ENST00000494674 OLFM4Q6UX06 510 aa12.4□□□□□ -0.43
PRPF4B-209ENST00000494674 ZNF654Q8IZM8 581 aa12.4□□□□□ -0.43
PRPF4B-209ENST00000494674 SH3RF3Q8TEJ3 882 aaPredicted RBP12.4□□□□□ -0.43
PRPF4B-209ENST00000494674 ARPP21Q9UBL0 812 aaPredicted RBP12.4□□□□□ -0.43
PRPF4B-209ENST00000494674 RCOR1Q9UKL0 485 aa12.4□□□□□ -0.43
PRPF4B-209ENST00000494674 SCN9AQ15858 1988 aa12.39□□□□□ -0.43
PRPF4B-209ENST00000494674 PRDM1O75626 825 aa12.39□□□□□ -0.43
PRPF4B-209ENST00000494674 IFNAR1P17181 557 aa12.39□□□□□ -0.43
PRPF4B-209ENST00000494674 NASPP49321 788 aaPredicted RBP12.39□□□□□ -0.43
PRPF4B-209ENST00000494674 GSTO1P78417 241 aa12.39□□□□□ -0.43
PRPF4B-209ENST00000494674 KIF23Q02241 960 aaPredicted RBP12.39□□□□□ -0.43
PRPF4B-209ENST00000494674 TPRNQ4KMQ1 711 aa12.39□□□□□ -0.43
PRPF4B-209ENST00000494674 MSL1Q68DK7 614 aa12.39□□□□□ -0.43
PRPF4B-209ENST00000494674 ATL3Q6DD88 541 aa12.39□□□□□ -0.43
PRPF4B-209ENST00000494674 NBPF11Q86T75 865 aa12.39□□□□□ -0.43
PRPF4B-209ENST00000494674 TMTC2Q8N394 836 aa12.39□□□□□ -0.43
PRPF4B-209ENST00000494674 ZSCAN10Q96SZ4 725 aaPredicted RBP12.39□□□□□ -0.43
PRPF4B-209ENST00000494674 UBAC1Q9BSL1 405 aa12.39□□□□□ -0.43
PRPF4B-209ENST00000494674 FUCA2Q9BTY2 467 aa12.39□□□□□ -0.43
PRPF4B-209ENST00000494674 CFAP45Q9UL16 551 aa12.39□□□□□ -0.43
PRPF4B-209ENST00000494674 FMNL1O95466 1100 aaPredicted RBP12.38□□□□□ -0.43
PRPF4B-209ENST00000494674 USP17L8P0C7I0 530 aa12.38□□□□□ -0.43
PRPF4B-209ENST00000494674 PDE6BP35913 854 aa12.38□□□□□ -0.43
PRPF4B-209ENST00000494674 RTN1Q16799 776 aa12.38□□□□□ -0.43
PRPF4B-209ENST00000494674 CAMKK2Q96RR4 588 aa12.38□□□□□ -0.43
PRPF4B-209ENST00000494674 ALG1Q9BT22 464 aa12.38□□□□□ -0.43
PRPF4B-209ENST00000494674 PARP3Q9Y6F1 533 aa12.38□□□□□ -0.43
PRPF4B-209ENST00000494674 GAKO14976 1311 aa12.38□□□□□ -0.43
PRPF4B-209ENST00000494674 GPR75-ASB3A0A0A6YYF3 556 aa12.37□□□□□ -0.43
PRPF4B-209ENST00000494674 ERICH2A1L162 156 aa12.37□□□□□ -0.43
PRPF4B-209ENST00000494674 C6orf229H3BNL8 230 aa12.37□□□□□ -0.43
PRPF4B-209ENST00000494674 IARSP41252 1262 aaKnown RBP12.37□□□□□ -0.43
PRPF4B-209ENST00000494674 C12orf60Q5U649 245 aa12.37□□□□□ -0.43
PRPF4B-209ENST00000494674 CPLX2Q6PUV4 134 aaKnown RBP12.37□□□□□ -0.43
PRPF4B-209ENST00000494674 KLHL34Q8N239 644 aa12.37□□□□□ -0.43
PRPF4B-209ENST00000494674 FAM163AQ96GL9 167 aaPredicted RBP12.37□□□□□ -0.43
PRPF4B-209ENST00000494674 TSPY26PQ9H489 355 aa12.37□□□□□ -0.43
PRPF4B-209ENST00000494674 SNED1Q8TER0 1413 aa12.37□□□□□ -0.43
PRPF4B-209ENST00000494674 LDHCP07864 332 aa12.37□□□□□ -0.43
PRPF4B-209ENST00000494674 GUCY1A2P33402 732 aa12.37□□□□□ -0.43
PRPF4B-209ENST00000494674 CEBPZQ03701 1054 aaKnown RBP12.37□□□□□ -0.43
PRPF4B-209ENST00000494674 FUT2Q10981 343 aa12.37□□□□□ -0.43
PRPF4B-209ENST00000494674 EZH2Q15910 746 aaKnown RBP12.37□□□□□ -0.43
PRPF4B-209ENST00000494674 MFSD14BQ5SR56 506 aa12.37□□□□□ -0.43
PRPF4B-209ENST00000494674 MYSM1Q5VVJ2 828 aa12.37□□□□□ -0.43
PRPF4B-209ENST00000494674 KRT40Q6A162 431 aa12.37□□□□□ -0.43
PRPF4B-209ENST00000494674 BRAPQ7Z569 592 aa12.37□□□□□ -0.43
PRPF4B-209ENST00000494674 FANCBQ8NB91 859 aa12.37□□□□□ -0.43
PRPF4B-209ENST00000494674 MASTLQ96GX5 879 aa12.37□□□□□ -0.43
PRPF4B-209ENST00000494674 ZNF396Q96N95 335 aaPredicted RBP12.37□□□□□ -0.43
PRPF4B-209ENST00000494674 MCM9Q9NXL9 1143 aa12.37□□□□□ -0.43
PRPF4B-209ENST00000494674 RTEL1Q9NZ71 1219 aa12.37□□□□□ -0.43
PRPF4B-209ENST00000494674 MYH8P13535 1937 aa12.36□□□□□ -0.43
PRPF4B-209ENST00000494674 NMT2O60551 498 aa12.36□□□□□ -0.43
PRPF4B-209ENST00000494674 BAG3O95817 575 aa12.36□□□□□ -0.43
PRPF4B-209ENST00000494674 ALDH1B1P30837 517 aa12.36□□□□□ -0.43
PRPF4B-209ENST00000494674 BTDP43251 543 aa12.36□□□□□ -0.43
PRPF4B-209ENST00000494674 RHBDL3P58872 404 aa12.36□□□□□ -0.43
PRPF4B-209ENST00000494674 TROAPQ12815 778 aa12.36□□□□□ -0.43
PRPF4B-209ENST00000494674 SLC15A2Q16348 729 aa12.36□□□□□ -0.43
PRPF4B-209ENST00000494674 SYNE3Q6ZMZ3 975 aa12.36□□□□□ -0.43
PRPF4B-209ENST00000494674 RBM43Q6ZSC3 357 aaKnown RBP12.36□□□□□ -0.43
PRPF4B-209ENST00000494674 CRACR2BQ8N4Y2 399 aaPredicted RBP12.36□□□□□ -0.43
PRPF4B-209ENST00000494674 TBC1D22AQ8WUA7 517 aa12.36□□□□□ -0.43
PRPF4B-209ENST00000494674 SLC26A6Q9BXS9 759 aa12.36□□□□□ -0.43
PRPF4B-209ENST00000494674 COA1Q9GZY4 146 aa12.36□□□□□ -0.43
PRPF4B-209ENST00000494674 PSME4Q14997 1843 aa12.35□□□□□ -0.43
PRPF4B-209ENST00000494674 LETM1O95202 739 aaPredicted RBP12.35□□□□□ -0.43
PRPF4B-209ENST00000494674 EN1Q05925 392 aaPredicted RBP12.35□□□□□ -0.43
PRPF4B-209ENST00000494674 SSRP1Q08945 709 aaKnown RBP12.35□□□□□ -0.43
PRPF4B-209ENST00000494674 RCSD1Q6JBY9 416 aa12.35□□□□□ -0.43
PRPF4B-209ENST00000494674 MPNDQ8N594 471 aa12.35□□□□□ -0.43
PRPF4B-209ENST00000494674 CERS5Q8N5B7 392 aa12.35□□□□□ -0.43
PRPF4B-209ENST00000494674 PPP1R9BQ96SB3 815 aa12.35□□□□□ -0.43
PRPF4B-209ENST00000494674 POLR3EQ9NVU0 708 aa12.35□□□□□ -0.43
PRPF4B-209ENST00000494674 DACT1Q9NYF0 836 aa12.35□□□□□ -0.43
PRPF4B-209ENST00000494674 BAZ2BQ9UIF8 2168 aaKnown RBP12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 RIMBP2O15034 1052 aa12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 NR1I2O75469 434 aa12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 POLR3DP05423 398 aaPredicted RBP12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 SLC3A2P08195 630 aaKnown RBP12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 U2AF2P26368 475 aaKnown RBP eCLIP12.34□□□□□ -0.439e-12■■□□□ 14.4
PRPF4B-209ENST00000494674 USP5P45974 858 aa12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 GTF2IP78347 998 aa12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 FAM47AQ5JRC9 791 aa12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 IFIT1BQ5T764 474 aaKnown RBP12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 IQCA1Q86XH1 822 aa12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 CERS3Q8IU89 383 aa12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 CMTR1Q8N1G2 835 aaKnown RBP12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 LINC00301Q8NCQ3 95 aa12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 TGFBRAP1Q8WUH2 860 aa12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 SHISA4Q96DD7 197 aa12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 DYNLL2Q96FJ2 89 aa12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 GOLPH3LQ9H4A5 285 aa12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 CLIC4Q9Y696 253 aa12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 CCDC196A0A1B0GTZ2 297 aa12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 DDAH1O94760 285 aa12.34□□□□□ -0.43
PRPF4B-209ENST00000494674 YEATS4O95619 227 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms