RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 HERC5Q9UII4 1024 aaKnown RBP18.99■□□□□ 0.63
LIMS2-216ENST00000494613 PTPN22Q9Y2R2 807 aa18.99■□□□□ 0.63
LIMS2-216ENST00000494613 A0A0G2JLL6 359 aaPredicted RBP18.98■□□□□ 0.63
LIMS2-216ENST00000494613 CAP2P40123 477 aa18.98■□□□□ 0.63
LIMS2-216ENST00000494613 MLLT1Q03111 559 aaPredicted RBP18.98■□□□□ 0.63
LIMS2-216ENST00000494613 ARHGEF6Q15052 776 aa18.98■□□□□ 0.63
LIMS2-216ENST00000494613 TMED8Q6PL24 325 aaPredicted RBP18.98■□□□□ 0.63
LIMS2-216ENST00000494613 C17orf99Q6UX52 265 aa18.98■□□□□ 0.63
LIMS2-216ENST00000494613 PRRT2Q7Z6L0 340 aaPredicted RBP18.98■□□□□ 0.63
LIMS2-216ENST00000494613 CCDC84Q86UT8 332 aaPredicted RBP18.98■□□□□ 0.63
LIMS2-216ENST00000494613 SMARCA5O60264 1052 aaPredicted RBP18.97■□□□□ 0.63
LIMS2-216ENST00000494613 ATP5JP18859 108 aa18.97■□□□□ 0.63
LIMS2-216ENST00000494613 SOX10P56693 466 aa18.97■□□□□ 0.63
LIMS2-216ENST00000494613 SLC9C2Q5TAH2 1124 aa18.97■□□□□ 0.63
LIMS2-216ENST00000494613 METTL16Q86W50 562 aaKnown RBP18.97■□□□□ 0.63
LIMS2-216ENST00000494613 DNAJC2Q99543 621 aaKnown RBP18.97■□□□□ 0.63
LIMS2-216ENST00000494613 LRRCC1Q9C099 1032 aa18.97■□□□□ 0.63
LIMS2-216ENST00000494613 BOLA2Q9H3K6 86 aa18.97■□□□□ 0.63
LIMS2-216ENST00000494613 DCTPP1Q9H773 170 aa18.97■□□□□ 0.63
LIMS2-216ENST00000494613 SAP30BPQ9UHR5 308 aaKnown RBP18.97■□□□□ 0.63
LIMS2-216ENST00000494613 CPA4Q9UI42 421 aa18.97■□□□□ 0.63
LIMS2-216ENST00000494613 FLT1P17948 1338 aa18.97■□□□□ 0.63
LIMS2-216ENST00000494613 MYO5AQ9Y4I1 1855 aaKnown RBP18.97■□□□□ 0.63
LIMS2-216ENST00000494613 TRIM75PA6NK02 468 aa18.96■□□□□ 0.63
LIMS2-216ENST00000494613 GOLIM4O00461 696 aa18.96■□□□□ 0.63
LIMS2-216ENST00000494613 GADL1Q6ZQY3 521 aa18.96■□□□□ 0.63
LIMS2-216ENST00000494613 CERS3Q8IU89 383 aa18.96■□□□□ 0.63
LIMS2-216ENST00000494613 EDC3Q96F86 508 aaKnown RBP18.96■□□□□ 0.63
LIMS2-216ENST00000494613 COL2A1P02458 1487 aaPredicted RBP18.96■□□□□ 0.63
LIMS2-216ENST00000494613 USP5P45974 858 aa18.95■□□□□ 0.62
LIMS2-216ENST00000494613 SPP2Q13103 211 aa18.95■□□□□ 0.62
LIMS2-216ENST00000494613 KIF22Q14807 665 aa18.95■□□□□ 0.62
LIMS2-216ENST00000494613 ARHGAP39Q9C0H5 1083 aa18.95■□□□□ 0.62
LIMS2-216ENST00000494613 USP17L5A8MUK1 530 aa18.94■□□□□ 0.62
LIMS2-216ENST00000494613 CYP2C8P10632 490 aa18.94■□□□□ 0.62
LIMS2-216ENST00000494613 PDE6AP16499 860 aa18.94■□□□□ 0.62
LIMS2-216ENST00000494613 JAG1P78504 1218 aa18.94■□□□□ 0.62
LIMS2-216ENST00000494613 LACTBP83111 547 aaPredicted RBP18.94■□□□□ 0.62
LIMS2-216ENST00000494613 CRACR2BQ8N4Y2 399 aaPredicted RBP18.94■□□□□ 0.62
LIMS2-216ENST00000494613 YTHDC1Q96MU7 727 aaKnown RBP18.94■□□□□ 0.62
LIMS2-216ENST00000494613 RIOK1Q9BRS2 568 aaKnown RBP18.94■□□□□ 0.62
LIMS2-216ENST00000494613 PCDHB15Q9Y5E8 787 aa18.94■□□□□ 0.62
LIMS2-216ENST00000494613 MAGEB6P1A0A0J9YX57 407 aa18.93■□□□□ 0.62
LIMS2-216ENST00000494613 SLC4A8Q2Y0W8 1093 aa18.93■□□□□ 0.62
LIMS2-216ENST00000494613 ZNF280CQ8ND82 737 aa18.93■□□□□ 0.62
LIMS2-216ENST00000494613 HAUS7Q99871 368 aa18.93■□□□□ 0.62
LIMS2-216ENST00000494613 DNAJC18Q9H819 358 aa18.93■□□□□ 0.62
LIMS2-216ENST00000494613 PAG1Q9NWQ8 432 aa18.93■□□□□ 0.62
LIMS2-216ENST00000494613 ZNF532Q9HCE3 1301 aa18.93■□□□□ 0.62
LIMS2-216ENST00000494613 TCRBV5S4A2TA0A5A2 114 aa18.92■□□□□ 0.62
LIMS2-216ENST00000494613 ECM2O94769 699 aaPredicted RBP18.92■□□□□ 0.62
LIMS2-216ENST00000494613 HLA-DOAP06340 250 aa18.92■□□□□ 0.62
LIMS2-216ENST00000494613 TRIM34Q9BYJ4 488 aa18.92■□□□□ 0.62
LIMS2-216ENST00000494613 TBC1D2Q9BYX2 928 aa18.92■□□□□ 0.62
LIMS2-216ENST00000494613 SLC45A1Q9Y2W3 748 aa18.92■□□□□ 0.62
LIMS2-216ENST00000494613 DOCK2Q92608 1830 aa18.92■□□□□ 0.62
LIMS2-216ENST00000494613 ADGRA2Q96PE1 1338 aa18.92■□□□□ 0.62
LIMS2-216ENST00000494613 CTGFP29279 349 aa18.91■□□□□ 0.62
LIMS2-216ENST00000494613 PSMC4P43686 418 aa18.91■□□□□ 0.62
LIMS2-216ENST00000494613 RRP1P56182 461 aaKnown RBP18.91■□□□□ 0.62
LIMS2-216ENST00000494613 SLFNL1Q499Z3 407 aa18.91■□□□□ 0.62
LIMS2-216ENST00000494613 PARK7Q99497 189 aaKnown RBP18.91■□□□□ 0.62
LIMS2-216ENST00000494613 GNRH1P01148 92 aa18.9■□□□□ 0.62
LIMS2-216ENST00000494613 ASNSP08243 561 aa18.9■□□□□ 0.62
LIMS2-216ENST00000494613 BCRP11274 1271 aa18.9■□□□□ 0.62
LIMS2-216ENST00000494613 PLCD1P51178 756 aa18.9■□□□□ 0.62
LIMS2-216ENST00000494613 SHROOM1Q2M3G4 852 aaPredicted RBP18.9■□□□□ 0.62
LIMS2-216ENST00000494613 TTC6Q86TZ1 520 aa18.9■□□□□ 0.62
LIMS2-216ENST00000494613 WDR18Q9BV38 432 aa18.9■□□□□ 0.62
LIMS2-216ENST00000494613 AS3MTQ9HBK9 375 aa18.9■□□□□ 0.62
LIMS2-216ENST00000494613 AGTPBP1Q9UPW5 1226 aa18.9■□□□□ 0.62
LIMS2-216ENST00000494613 PTCH2Q9Y6C5 1203 aa18.9■□□□□ 0.62
LIMS2-216ENST00000494613 HMGCS2P54868 508 aa18.89■□□□□ 0.61
LIMS2-216ENST00000494613 SH3D19Q5HYK7 790 aa18.89■□□□□ 0.61
LIMS2-216ENST00000494613 TREML2Q5T2D2 321 aa18.89■□□□□ 0.61
LIMS2-216ENST00000494613 TATDN1Q6P1N9 297 aa18.89■□□□□ 0.61
LIMS2-216ENST00000494613 PROCA1Q8NCQ7 364 aaPredicted RBP18.89■□□□□ 0.61
LIMS2-216ENST00000494613 TRIM47Q96LD4 638 aa18.89■□□□□ 0.61
LIMS2-216ENST00000494613 CRNKL1Q9BZJ0 848 aaKnown RBP18.89■□□□□ 0.61
LIMS2-216ENST00000494613 GINM1Q9NU53 330 aa18.89■□□□□ 0.61
LIMS2-216ENST00000494613 SERPINB13Q9UIV8 391 aa18.89■□□□□ 0.61
LIMS2-216ENST00000494613 GDF11O95390 407 aa18.88■□□□□ 0.61
LIMS2-216ENST00000494613 FMNL1O95466 1100 aaPredicted RBP18.88■□□□□ 0.61
LIMS2-216ENST00000494613 POLR3DP05423 398 aaPredicted RBP18.88■□□□□ 0.61
LIMS2-216ENST00000494613 HOXD10P28358 340 aa18.88■□□□□ 0.61
LIMS2-216ENST00000494613 ADD2P35612 726 aa18.88■□□□□ 0.61
LIMS2-216ENST00000494613 NBPF11Q86T75 865 aa18.88■□□□□ 0.61
LIMS2-216ENST00000494613 ARMC5Q96C12 935 aa18.88■□□□□ 0.61
LIMS2-216ENST00000494613 ECHDC1Q9NTX5 307 aa18.88■□□□□ 0.61
LIMS2-216ENST00000494613 CHGBP05060 677 aa18.87■□□□□ 0.61
LIMS2-216ENST00000494613 BACE1P56817 501 aa18.87■□□□□ 0.61
LIMS2-216ENST00000494613 LCORLQ8N3X6 602 aa18.87■□□□□ 0.61
LIMS2-216ENST00000494613 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.87■□□□□ 0.61
LIMS2-216ENST00000494613 EHD4Q9H223 541 aa18.87■□□□□ 0.61
LIMS2-216ENST00000494613 ARMT1Q9H993 441 aa18.87■□□□□ 0.61
LIMS2-216ENST00000494613 C19orf81C9J6K1 198 aa18.86■□□□□ 0.61
LIMS2-216ENST00000494613 USP17L10C9JJH3 530 aa18.86■□□□□ 0.61
LIMS2-216ENST00000494613 PRMT2P55345 433 aa18.86■□□□□ 0.61
LIMS2-216ENST00000494613 CERKLQ49MI3 558 aaPredicted RBP18.86■□□□□ 0.61
LIMS2-216ENST00000494613 SDR42E1Q8WUS8 393 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms