RNA–Protein interactions for RNA: ENST00000494532.1

UBE3C-207, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-207ENST00000494532 B4E1Z4 1266 aa16.67■□□□□ 0.26
UBE3C-207ENST00000494532 ST18O60284 1047 aa16.67■□□□□ 0.26
UBE3C-207ENST00000494532 PDE4BQ07343 736 aa16.67■□□□□ 0.26
UBE3C-207ENST00000494532 RUFY3Q7L099 469 aa16.67■□□□□ 0.26
UBE3C-207ENST00000494532 FAM83AQ86UY5 434 aa16.67■□□□□ 0.26
UBE3C-207ENST00000494532 APOBEC3FQ8IUX4 373 aaKnown RBP16.67■□□□□ 0.26
UBE3C-207ENST00000494532 DYNLL2Q96FJ2 89 aa16.67■□□□□ 0.26
UBE3C-207ENST00000494532 INCENPQ9NQS7 918 aa16.67■□□□□ 0.26
UBE3C-207ENST00000494532 TACC3Q9Y6A5 838 aa16.67■□□□□ 0.26
UBE3C-207ENST00000494532 ATRNL1Q5VV63 1379 aa16.66■□□□□ 0.26
UBE3C-207ENST00000494532 SIPA1L1O43166 1804 aa16.66■□□□□ 0.26
UBE3C-207ENST00000494532 DDTLA6NHG4 134 aaPredicted RBP16.66■□□□□ 0.26
UBE3C-207ENST00000494532 RPS6KB1P23443 525 aa16.66■□□□□ 0.26
UBE3C-207ENST00000494532 EPHX2P34913 555 aa16.66■□□□□ 0.26
UBE3C-207ENST00000494532 HIRAP54198 1017 aaPredicted RBP16.66■□□□□ 0.26
UBE3C-207ENST00000494532 ANGEL2Q5VTE6 544 aaKnown RBP16.66■□□□□ 0.26
UBE3C-207ENST00000494532 SH3BP5LQ7L8J4 393 aa16.66■□□□□ 0.26
UBE3C-207ENST00000494532 MB21D2Q8IYB1 491 aaPredicted RBP16.66■□□□□ 0.26
UBE3C-207ENST00000494532 GGA3Q9NZ52 723 aa16.66■□□□□ 0.26
UBE3C-207ENST00000494532 PI4KBQ9UBF8 816 aa16.66■□□□□ 0.26
UBE3C-207ENST00000494532 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.66■□□□□ 0.26
UBE3C-207ENST00000494532 MYH8P13535 1937 aa16.66■□□□□ 0.26
UBE3C-207ENST00000494532 ORC4O43929 436 aa16.65■□□□□ 0.26
UBE3C-207ENST00000494532 PRDM1O75626 825 aa16.65■□□□□ 0.26
UBE3C-207ENST00000494532 FGRP09769 529 aa16.65■□□□□ 0.26
UBE3C-207ENST00000494532 MCM5P33992 734 aa16.65■□□□□ 0.26
UBE3C-207ENST00000494532 C16orf86Q6ZW13 317 aa16.65■□□□□ 0.26
UBE3C-207ENST00000494532 USP50Q70EL3 339 aaPredicted RBP16.65■□□□□ 0.26
UBE3C-207ENST00000494532 DHX32Q7L7V1 743 aaKnown RBP16.65■□□□□ 0.26
UBE3C-207ENST00000494532 CRACR2BQ8N4Y2 399 aaPredicted RBP16.65■□□□□ 0.26
UBE3C-207ENST00000494532 IL27Q8NEV9 243 aa16.65■□□□□ 0.26
UBE3C-207ENST00000494532 ESR2Q92731 530 aa16.65■□□□□ 0.26
UBE3C-207ENST00000494532 TRIM34Q9BYJ4 488 aa16.65■□□□□ 0.26
UBE3C-207ENST00000494532 TMEM39BQ9GZU3 492 aa16.65■□□□□ 0.26
UBE3C-207ENST00000494532 EHD4Q9H223 541 aa16.65■□□□□ 0.26
UBE3C-207ENST00000494532 MKNK2Q9HBH9 465 aa16.65■□□□□ 0.26
UBE3C-207ENST00000494532 ZNF287Q9HBT7 754 aa16.65■□□□□ 0.26
UBE3C-207ENST00000494532 PDRG1Q9NUG6 133 aa16.65■□□□□ 0.26
UBE3C-207ENST00000494532 SERPINB13Q9UIV8 391 aa16.65■□□□□ 0.26
UBE3C-207ENST00000494532 RANBP6O60518 1105 aaKnown RBP16.64■□□□□ 0.25
UBE3C-207ENST00000494532 KDM4AO75164 1064 aa16.64■□□□□ 0.25
UBE3C-207ENST00000494532 CDK8P49336 464 aa16.64■□□□□ 0.25
UBE3C-207ENST00000494532 COL9A3Q14050 684 aaPredicted RBP16.64■□□□□ 0.25
UBE3C-207ENST00000494532 RASA3Q14644 834 aa16.64■□□□□ 0.25
UBE3C-207ENST00000494532 SLC44A5Q8NCS7 719 aa16.64■□□□□ 0.25
UBE3C-207ENST00000494532 TCEANC2Q96MN5 208 aa16.64■□□□□ 0.25
UBE3C-207ENST00000494532 CSRNP1Q96S65 589 aa16.64■□□□□ 0.25
UBE3C-207ENST00000494532 TAF1DQ9H5J8 278 aaPredicted RBP16.64■□□□□ 0.25
UBE3C-207ENST00000494532 SWAP70Q9UH65 585 aa16.64■□□□□ 0.25
UBE3C-207ENST00000494532 SCAF8Q9UPN6 1271 aaKnown RBP16.64■□□□□ 0.25
UBE3C-207ENST00000494532 PITPNM2Q9BZ72 1349 aa16.64■□□□□ 0.25
UBE3C-207ENST00000494532 PRC1O43663 620 aa16.63■□□□□ 0.25
UBE3C-207ENST00000494532 FGD1P98174 961 aa16.63■□□□□ 0.25
UBE3C-207ENST00000494532 GABPAQ06546 454 aa16.63■□□□□ 0.25
UBE3C-207ENST00000494532 TTC14Q96N46 770 aa16.63■□□□□ 0.25
UBE3C-207ENST00000494532 TAOK2Q9UL54 1235 aa16.63■□□□□ 0.25
UBE3C-207ENST00000494532 POTECB2RU33 542 aa16.62■□□□□ 0.25
UBE3C-207ENST00000494532 NT5C2P49902 561 aa16.62■□□□□ 0.25
UBE3C-207ENST00000494532 ANTXR2P58335 489 aa16.62■□□□□ 0.25
UBE3C-207ENST00000494532 EXOSC10Q01780 885 aaKnown RBP16.62■□□□□ 0.25
UBE3C-207ENST00000494532 EAPPQ56P03 285 aaPredicted RBP16.62■□□□□ 0.25
UBE3C-207ENST00000494532 CYB5R4Q7L1T6 521 aa16.62■□□□□ 0.25
UBE3C-207ENST00000494532 CHST3Q7LGC8 479 aa16.62■□□□□ 0.25
UBE3C-207ENST00000494532 FOXP4Q8IVH2 680 aaPredicted RBP16.62■□□□□ 0.25
UBE3C-207ENST00000494532 HSCBQ8IWL3 235 aa16.62■□□□□ 0.25
UBE3C-207ENST00000494532 ZNF444Q8N0Y2 327 aaPredicted RBP16.62■□□□□ 0.25
UBE3C-207ENST00000494532 NKX2-3Q8TAU0 364 aa16.62■□□□□ 0.25
UBE3C-207ENST00000494532 SNX21Q969T3 373 aa16.62■□□□□ 0.25
UBE3C-207ENST00000494532 DCPSQ96C86 337 aaKnown RBP16.62■□□□□ 0.25
UBE3C-207ENST00000494532 LRRC2Q9BYS8 371 aa16.62■□□□□ 0.25
UBE3C-207ENST00000494532 DEFB129Q9H1M3 183 aa16.62■□□□□ 0.25
UBE3C-207ENST00000494532 ZSWIM5Q9P217 1185 aa16.62■□□□□ 0.25
UBE3C-207ENST00000494532 WDR19Q8NEZ3 1342 aa16.62■□□□□ 0.25
UBE3C-207ENST00000494532 POLR2AP24928 1970 aaKnown RBP16.61■□□□□ 0.25
UBE3C-207ENST00000494532 TSPY2A6NKD2 308 aa16.61■□□□□ 0.25
UBE3C-207ENST00000494532 CD2BP2O95400 341 aaKnown RBP16.61■□□□□ 0.25
UBE3C-207ENST00000494532 RASA1P20936 1047 aa16.61■□□□□ 0.25
UBE3C-207ENST00000494532 BECN1Q14457 450 aa16.61■□□□□ 0.25
UBE3C-207ENST00000494532 FAM47AQ5JRC9 791 aa16.61■□□□□ 0.25
UBE3C-207ENST00000494532 Q6ZUG5 572 aa16.61■□□□□ 0.25
UBE3C-207ENST00000494532 NOL8Q76FK4 1167 aaKnown RBP16.61■□□□□ 0.25
UBE3C-207ENST00000494532 PNMA8AQ86V59 439 aaPredicted RBP16.61■□□□□ 0.25
UBE3C-207ENST00000494532 METTL16Q86W50 562 aaKnown RBP16.61■□□□□ 0.25
UBE3C-207ENST00000494532 CDAN1Q8IWY9 1227 aa16.61■□□□□ 0.25
UBE3C-207ENST00000494532 PPP2R3BQ9Y5P8 575 aa16.61■□□□□ 0.25
UBE3C-207ENST00000494532 FAM196BA6NMK8 535 aa16.6■□□□□ 0.25
UBE3C-207ENST00000494532 SHMT1P34896 483 aa16.6■□□□□ 0.25
UBE3C-207ENST00000494532 MCM2P49736 904 aa16.6■□□□□ 0.25
UBE3C-207ENST00000494532 AK2P54819 239 aa16.6■□□□□ 0.25
UBE3C-207ENST00000494532 SART3Q15020 963 aaKnown RBP16.6■□□□□ 0.25
UBE3C-207ENST00000494532 ANKRD1Q15327 319 aa16.6■□□□□ 0.25
UBE3C-207ENST00000494532 IQCA1Q86XH1 822 aa16.6■□□□□ 0.25
UBE3C-207ENST00000494532 ZC3H15Q8WU90 426 aaKnown RBP16.6■□□□□ 0.25
UBE3C-207ENST00000494532 TMEM87BQ96K49 555 aa16.6■□□□□ 0.25
UBE3C-207ENST00000494532 TEPSINQ96N21 525 aa16.6■□□□□ 0.25
UBE3C-207ENST00000494532 UBAC1Q9BSL1 405 aa16.6■□□□□ 0.25
UBE3C-207ENST00000494532 ALDH8A1Q9H2A2 487 aaPredicted RBP16.6■□□□□ 0.25
UBE3C-207ENST00000494532 DNAJC18Q9H819 358 aa16.6■□□□□ 0.25
UBE3C-207ENST00000494532 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.6■□□□□ 0.25
UBE3C-207ENST00000494532 PGAP2Q9UHJ9 254 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms