RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 ZSCAN10Q96SZ4 725 aaPredicted RBP19.29■□□□□ 0.68
ATG4B-225ENST00000494465 PANK2Q9BZ23 570 aa19.29■□□□□ 0.68
ATG4B-225ENST00000494465 MCM9Q9NXL9 1143 aa19.29■□□□□ 0.68
ATG4B-225ENST00000494465 STK32BQ9NY57 414 aa19.29■□□□□ 0.68
ATG4B-225ENST00000494465 GPR75-ASB3A0A0A6YYF3 556 aa19.29■□□□□ 0.68
ATG4B-225ENST00000494465 RCAN1P53805 252 aa19.29■□□□□ 0.68
ATG4B-225ENST00000494465 DPP8Q6V1X1 898 aaPredicted RBP19.29■□□□□ 0.68
ATG4B-225ENST00000494465 ZNF654Q8IZM8 581 aa19.29■□□□□ 0.68
ATG4B-225ENST00000494465 FAM163AQ96GL9 167 aaPredicted RBP19.29■□□□□ 0.68
ATG4B-225ENST00000494465 AIFM3Q96NN9 605 aa19.29■□□□□ 0.68
ATG4B-225ENST00000494465 C12orf60Q5U649 245 aa19.28■□□□□ 0.68
ATG4B-225ENST00000494465 CPLX2Q6PUV4 134 aaKnown RBP19.28■□□□□ 0.68
ATG4B-225ENST00000494465 LRSAM1Q6UWE0 723 aa19.28■□□□□ 0.68
ATG4B-225ENST00000494465 SYNE3Q6ZMZ3 975 aa19.28■□□□□ 0.68
ATG4B-225ENST00000494465 ZNF622Q969S3 477 aaKnown RBP eCLIP19.28■□□□□ 0.682e-6■■□□□ 11.6
ATG4B-225ENST00000494465 GAKO14976 1311 aa19.28■□□□□ 0.68
ATG4B-225ENST00000494465 GTF2IP78347 998 aa19.28■□□□□ 0.68
ATG4B-225ENST00000494465 TPRNQ4KMQ1 711 aa19.28■□□□□ 0.68
ATG4B-225ENST00000494465 STYK1Q6J9G0 422 aa19.28■□□□□ 0.68
ATG4B-225ENST00000494465 FOCADQ5VW36 1801 aa19.28■□□□□ 0.68
ATG4B-225ENST00000494465 ROBO3Q96MS0 1386 aa19.27■□□□□ 0.68
ATG4B-225ENST00000494465 STK36Q9NRP7 1315 aa19.27■□□□□ 0.68
ATG4B-225ENST00000494465 IFNAR1P17181 557 aa19.27■□□□□ 0.68
ATG4B-225ENST00000494465 BTDP43251 543 aa19.27■□□□□ 0.68
ATG4B-225ENST00000494465 USP5P45974 858 aa19.27■□□□□ 0.68
ATG4B-225ENST00000494465 ZC3H12CQ9C0D7 883 aaKnown RBP19.27■□□□□ 0.68
ATG4B-225ENST00000494465 IARSP41252 1262 aaKnown RBP19.27■□□□□ 0.67
ATG4B-225ENST00000494465 RTN1Q16799 776 aa19.27■□□□□ 0.67
ATG4B-225ENST00000494465 CCDC183Q5T5S1 534 aa19.27■□□□□ 0.67
ATG4B-225ENST00000494465 TGFBRAP1Q8WUH2 860 aa19.27■□□□□ 0.67
ATG4B-225ENST00000494465 PGBD1Q96JS3 809 aa19.27■□□□□ 0.67
ATG4B-225ENST00000494465 ALG1Q9BT22 464 aa19.27■□□□□ 0.67
ATG4B-225ENST00000494465 FTOQ9C0B1 505 aaKnown RBP eCLIP19.27■□□□□ 0.67
ATG4B-225ENST00000494465 CFAP45Q9UL16 551 aa19.27■□□□□ 0.67
ATG4B-225ENST00000494465 UBE2Q2LH0YL09 131 aa19.26■□□□□ 0.67
ATG4B-225ENST00000494465 CERS3Q8IU89 383 aa19.26■□□□□ 0.67
ATG4B-225ENST00000494465 FBXO41Q8TF61 875 aa19.26■□□□□ 0.67
ATG4B-225ENST00000494465 PDGFDQ9GZP0 370 aaPredicted RBP19.26■□□□□ 0.67
ATG4B-225ENST00000494465 H0YIN7 160 aa19.26■□□□□ 0.67
ATG4B-225ENST00000494465 FMNL1O95466 1100 aaPredicted RBP19.26■□□□□ 0.67
ATG4B-225ENST00000494465 SLC3A2P08195 630 aaKnown RBP19.26■□□□□ 0.67
ATG4B-225ENST00000494465 RHBDL3P58872 404 aa19.26■□□□□ 0.67
ATG4B-225ENST00000494465 ATL3Q6DD88 541 aa19.26■□□□□ 0.67
ATG4B-225ENST00000494465 NBPF11Q86T75 865 aa19.26■□□□□ 0.67
ATG4B-225ENST00000494465 IQCA1Q86XH1 822 aa19.26■□□□□ 0.67
ATG4B-225ENST00000494465 CERS5Q8N5B7 392 aa19.26■□□□□ 0.67
ATG4B-225ENST00000494465 FANCBQ8NB91 859 aa19.26■□□□□ 0.67
ATG4B-225ENST00000494465 USP28Q96RU2 1077 aa19.26■□□□□ 0.67
ATG4B-225ENST00000494465 NOL10Q9BSC4 688 aaKnown RBP19.26■□□□□ 0.67
ATG4B-225ENST00000494465 SLC4A8Q2Y0W8 1093 aa19.25■□□□□ 0.67
ATG4B-225ENST00000494465 RCOR1Q9UKL0 485 aa19.25■□□□□ 0.67
ATG4B-225ENST00000494465 MYH6P13533 1939 aa19.25■□□□□ 0.67
ATG4B-225ENST00000494465 KIF28PB7ZC32 967 aa19.25■□□□□ 0.67
ATG4B-225ENST00000494465 CHRNA5P30532 468 aa19.25■□□□□ 0.67
ATG4B-225ENST00000494465 KIF23Q02241 960 aaPredicted RBP19.25■□□□□ 0.67
ATG4B-225ENST00000494465 PDE4BQ07343 736 aa19.25■□□□□ 0.67
ATG4B-225ENST00000494465 DOK7Q18PE1 504 aa19.25■□□□□ 0.67
ATG4B-225ENST00000494465 FAM47AQ5JRC9 791 aa19.25■□□□□ 0.67
ATG4B-225ENST00000494465 ZNF646O15015 1829 aaPredicted RBP19.24■□□□□ 0.67
ATG4B-225ENST00000494465 MYH1P12882 1939 aa19.24■□□□□ 0.67
ATG4B-225ENST00000494465 NMT2O60551 498 aa19.24■□□□□ 0.67
ATG4B-225ENST00000494465 IFIT1BQ5T764 474 aaKnown RBP19.24■□□□□ 0.67
ATG4B-225ENST00000494465 MAPKAPK5Q8IW41 473 aa19.24■□□□□ 0.67
ATG4B-225ENST00000494465 SLC26A6Q9BXS9 759 aa19.24■□□□□ 0.67
ATG4B-225ENST00000494465 RBSNQ9H1K0 784 aa19.24■□□□□ 0.67
ATG4B-225ENST00000494465 SUGT1Q9Y2Z0 365 aa19.24■□□□□ 0.67
ATG4B-225ENST00000494465 LIG1P18858 919 aa19.24■□□□□ 0.67
ATG4B-225ENST00000494465 SSRP1Q08945 709 aaKnown RBP19.24■□□□□ 0.67
ATG4B-225ENST00000494465 SLF2Q8IX21 1173 aa19.24■□□□□ 0.67
ATG4B-225ENST00000494465 NUP133Q8WUM0 1156 aa19.24■□□□□ 0.67
ATG4B-225ENST00000494465 DYNLL2Q96FJ2 89 aa19.24■□□□□ 0.67
ATG4B-225ENST00000494465 DAGLAQ9Y4D2 1042 aa19.24■□□□□ 0.67
ATG4B-225ENST00000494465 SNED1Q8TER0 1413 aa19.23■□□□□ 0.67
ATG4B-225ENST00000494465 GUCY1A2P33402 732 aa19.23■□□□□ 0.67
ATG4B-225ENST00000494465 PLCD1P51178 756 aa19.23■□□□□ 0.67
ATG4B-225ENST00000494465 CEBPZQ03701 1054 aaKnown RBP19.23■□□□□ 0.67
ATG4B-225ENST00000494465 TROAPQ12815 778 aa19.23■□□□□ 0.67
ATG4B-225ENST00000494465 KRT40Q6A162 431 aa19.23■□□□□ 0.67
ATG4B-225ENST00000494465 DEFB132Q7Z7B7 95 aa19.23■□□□□ 0.67
ATG4B-225ENST00000494465 CRACR2BQ8N4Y2 399 aaPredicted RBP19.23■□□□□ 0.67
ATG4B-225ENST00000494465 ZNF396Q96N95 335 aaPredicted RBP19.23■□□□□ 0.67
ATG4B-225ENST00000494465 TMX4Q9H1E5 349 aaPredicted RBP19.23■□□□□ 0.67
ATG4B-225ENST00000494465 ADAMTSL1Q8N6G6 1762 aa19.23■□□□□ 0.67
ATG4B-225ENST00000494465 CCDC196A0A1B0GTZ2 297 aa19.22■□□□□ 0.67
ATG4B-225ENST00000494465 BRAPQ7Z569 592 aa19.22■□□□□ 0.67
ATG4B-225ENST00000494465 TEX11Q8IYF3 940 aa19.22■□□□□ 0.67
ATG4B-225ENST00000494465 CMTR1Q8N1G2 835 aaKnown RBP19.22■□□□□ 0.67
ATG4B-225ENST00000494465 C7orf43Q8WVR3 580 aa19.22■□□□□ 0.67
ATG4B-225ENST00000494465 SCN9AQ15858 1988 aa19.22■□□□□ 0.67
ATG4B-225ENST00000494465 PLCG2P16885 1265 aa19.22■□□□□ 0.67
ATG4B-225ENST00000494465 PPP2R5BQ15173 497 aa19.22■□□□□ 0.67
ATG4B-225ENST00000494465 EYA3Q99504 573 aa19.22■□□□□ 0.67
ATG4B-225ENST00000494465 MXD3Q9BW11 206 aa19.22■□□□□ 0.67
ATG4B-225ENST00000494465 FLT1P17948 1338 aa19.22■□□□□ 0.67
ATG4B-225ENST00000494465 GOLGB1Q14789 3259 aaKnown RBP19.22■□□□□ 0.67
ATG4B-225ENST00000494465 POLR3DP05423 398 aaPredicted RBP19.21■□□□□ 0.67
ATG4B-225ENST00000494465 RCSD1Q6JBY9 416 aa19.21■□□□□ 0.67
ATG4B-225ENST00000494465 SAP30BPQ9UHR5 308 aaKnown RBP19.21■□□□□ 0.67
ATG4B-225ENST00000494465 FUT2Q10981 343 aa19.21■□□□□ 0.67
ATG4B-225ENST00000494465 MYSM1Q5VVJ2 828 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms