RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 PTPRAP18433 802 aa16.02■□□□□ 0.16
ERCC3-209ENST00000494464 ERO1AQ96HE7 468 aa16.02■□□□□ 0.16
ERCC3-209ENST00000494464 LOC285556D6RIA3 1793 aa16.02■□□□□ 0.15
ERCC3-209ENST00000494464 SLURP2P0DP57 97 aa16.01■□□□□ 0.15
ERCC3-209ENST00000494464 ATP5JP18859 108 aa16.01■□□□□ 0.15
ERCC3-209ENST00000494464 ANKRD23Q86SG2 305 aa16.01■□□□□ 0.15
ERCC3-209ENST00000494464 METTL16Q86W50 562 aaKnown RBP16.01■□□□□ 0.15
ERCC3-209ENST00000494464 TGFBRAP1Q8WUH2 860 aa16.01■□□□□ 0.15
ERCC3-209ENST00000494464 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.01■□□□□ 0.15
ERCC3-209ENST00000494464 PI4KBQ9UBF8 816 aa16.01■□□□□ 0.15
ERCC3-209ENST00000494464 A0A0G2JLL6 359 aaPredicted RBP16■□□□□ 0.15
ERCC3-209ENST00000494464 CCDC85CA6NKD9 419 aa16■□□□□ 0.15
ERCC3-209ENST00000494464 FAM196BA6NMK8 535 aa16■□□□□ 0.15
ERCC3-209ENST00000494464 DYNLL1P63167 89 aaKnown RBP16■□□□□ 0.15
ERCC3-209ENST00000494464 SP3Q02447 781 aa16■□□□□ 0.15
ERCC3-209ENST00000494464 MOGSQ13724 837 aa16■□□□□ 0.15
ERCC3-209ENST00000494464 FBXO46Q6PJ61 603 aaPredicted RBP16■□□□□ 0.15
ERCC3-209ENST00000494464 PRRT2Q7Z6L0 340 aaPredicted RBP16■□□□□ 0.15
ERCC3-209ENST00000494464 MAPKAPK5Q8IW41 473 aa16■□□□□ 0.15
ERCC3-209ENST00000494464 MIGA1Q8NAN2 632 aa16■□□□□ 0.15
ERCC3-209ENST00000494464 DNAJC2Q99543 621 aaKnown RBP16■□□□□ 0.15
ERCC3-209ENST00000494464 DCTPP1Q9H773 170 aa16■□□□□ 0.15
ERCC3-209ENST00000494464 AFG3L2Q9Y4W6 797 aa16■□□□□ 0.15
ERCC3-209ENST00000494464 ZHX2Q9Y6X8 837 aa16■□□□□ 0.15
ERCC3-209ENST00000494464 HTTP42858 3142 aa16■□□□□ 0.15
ERCC3-209ENST00000494464 GOLIM4O00461 696 aa16■□□□□ 0.15
ERCC3-209ENST00000494464 TLR2O60603 784 aa16■□□□□ 0.15
ERCC3-209ENST00000494464 PDE6AP16499 860 aa16■□□□□ 0.15
ERCC3-209ENST00000494464 RIOK1Q9BRS2 568 aaKnown RBP16■□□□□ 0.15
ERCC3-209ENST00000494464 TBC1D2Q9BYX2 928 aa16■□□□□ 0.15
ERCC3-209ENST00000494464 ADGRA2Q96PE1 1338 aa15.99■□□□□ 0.15
ERCC3-209ENST00000494464 CAP2P40123 477 aa15.99■□□□□ 0.15
ERCC3-209ENST00000494464 SLC9C2Q5TAH2 1124 aa15.99■□□□□ 0.15
ERCC3-209ENST00000494464 FASTKD5Q7L8L6 764 aaKnown RBP15.99■□□□□ 0.15
ERCC3-209ENST00000494464 OTOP1Q7RTM1 612 aa15.99■□□□□ 0.15
ERCC3-209ENST00000494464 CD99L2Q8TCZ2 262 aa15.99■□□□□ 0.15
ERCC3-209ENST00000494464 HAUS7Q99871 368 aa15.99■□□□□ 0.15
ERCC3-209ENST00000494464 DNAJC18Q9H819 358 aa15.99■□□□□ 0.15
ERCC3-209ENST00000494464 PAG1Q9NWQ8 432 aa15.99■□□□□ 0.15
ERCC3-209ENST00000494464 HPS5Q9UPZ3 1129 aa15.99■□□□□ 0.15
ERCC3-209ENST00000494464 TRIM17Q9Y577 477 aa15.99■□□□□ 0.15
ERCC3-209ENST00000494464 TCRBV5S4A2TA0A5A2 114 aa15.98■□□□□ 0.15
ERCC3-209ENST00000494464 HLA-DOAP06340 250 aa15.98■□□□□ 0.15
ERCC3-209ENST00000494464 AAMPQ13685 434 aa15.98■□□□□ 0.15
ERCC3-209ENST00000494464 FOXP4Q8IVH2 680 aaPredicted RBP15.98■□□□□ 0.15
ERCC3-209ENST00000494464 BOLA2Q9H3K6 86 aa15.98■□□□□ 0.15
ERCC3-209ENST00000494464 PALD1Q9ULE6 856 aa15.98■□□□□ 0.15
ERCC3-209ENST00000494464 PCDHB15Q9Y5E8 787 aa15.98■□□□□ 0.15
ERCC3-209ENST00000494464 ZNF532Q9HCE3 1301 aa15.97■□□□□ 0.15
ERCC3-209ENST00000494464 ZSWIM8A7E2V4 1837 aa15.97■□□□□ 0.15
ERCC3-209ENST00000494464 PDHXO00330 501 aa15.97■□□□□ 0.15
ERCC3-209ENST00000494464 SMARCA5O60264 1052 aaPredicted RBP15.97■□□□□ 0.15
ERCC3-209ENST00000494464 USP5P45974 858 aa15.97■□□□□ 0.15
ERCC3-209ENST00000494464 RRP1BQ14684 758 aaKnown RBP15.97■□□□□ 0.15
ERCC3-209ENST00000494464 GPAT2Q6NUI2 795 aa15.97■□□□□ 0.15
ERCC3-209ENST00000494464 CRACR2BQ8N4Y2 399 aaPredicted RBP15.97■□□□□ 0.15
ERCC3-209ENST00000494464 EDC3Q96F86 508 aaKnown RBP15.97■□□□□ 0.15
ERCC3-209ENST00000494464 PARK7Q99497 189 aaKnown RBP15.97■□□□□ 0.15
ERCC3-209ENST00000494464 BCL11AQ9H165 835 aa15.97■□□□□ 0.15
ERCC3-209ENST00000494464 EHD4Q9H223 541 aa15.97■□□□□ 0.15
ERCC3-209ENST00000494464 GINM1Q9NU53 330 aa15.97■□□□□ 0.15
ERCC3-209ENST00000494464 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.97■□□□□ 0.15
ERCC3-209ENST00000494464 SLC45A1Q9Y2W3 748 aa15.97■□□□□ 0.15
ERCC3-209ENST00000494464 MAGEB6P1A0A0J9YX57 407 aa15.96■□□□□ 0.15
ERCC3-209ENST00000494464 ASNSP08243 561 aa15.96■□□□□ 0.15
ERCC3-209ENST00000494464 RGS19P49795 217 aa15.96■□□□□ 0.15
ERCC3-209ENST00000494464 C17orf99Q6UX52 265 aa15.96■□□□□ 0.15
ERCC3-209ENST00000494464 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.96■□□□□ 0.151e-6■□□□□ 10.8
ERCC3-209ENST00000494464 EFCC1Q9HA90 598 aa15.96■□□□□ 0.15
ERCC3-209ENST00000494464 ECHDC1Q9NTX5 307 aa15.96■□□□□ 0.15
ERCC3-209ENST00000494464 SAP30BPQ9UHR5 308 aaKnown RBP15.96■□□□□ 0.15
ERCC3-209ENST00000494464 TRIM75PA6NK02 468 aa15.95■□□□□ 0.14
ERCC3-209ENST00000494464 ADD2P35612 726 aa15.95■□□□□ 0.14
ERCC3-209ENST00000494464 CAP1Q01518 475 aa15.95■□□□□ 0.14
ERCC3-209ENST00000494464 ARHGEF6Q15052 776 aa15.95■□□□□ 0.14
ERCC3-209ENST00000494464 CCDC84Q86UT8 332 aaPredicted RBP15.95■□□□□ 0.14
ERCC3-209ENST00000494464 PROCA1Q8NCQ7 364 aaPredicted RBP15.95■□□□□ 0.14
ERCC3-209ENST00000494464 ZNF280CQ8ND82 737 aa15.95■□□□□ 0.14
ERCC3-209ENST00000494464 GPATCH3Q96I76 525 aa15.95■□□□□ 0.14
ERCC3-209ENST00000494464 TRIM34Q9BYJ4 488 aa15.95■□□□□ 0.14
ERCC3-209ENST00000494464 CRNKL1Q9BZJ0 848 aaKnown RBP15.95■□□□□ 0.14
ERCC3-209ENST00000494464 RBBP6Q7Z6E9 1792 aaKnown RBP15.95■□□□□ 0.14
ERCC3-209ENST00000494464 USP17L5A8MUK1 530 aa15.94■□□□□ 0.14
ERCC3-209ENST00000494464 LACTBP83111 547 aaPredicted RBP15.94■□□□□ 0.14
ERCC3-209ENST00000494464 GADL1Q6ZQY3 521 aa15.94■□□□□ 0.14
ERCC3-209ENST00000494464 AS3MTQ9HBK9 375 aa15.94■□□□□ 0.14
ERCC3-209ENST00000494464 SERPINB13Q9UIV8 391 aa15.94■□□□□ 0.14
ERCC3-209ENST00000494464 AGTPBP1Q9UPW5 1226 aa15.94■□□□□ 0.14
ERCC3-209ENST00000494464 PTPN22Q9Y2R2 807 aa15.94■□□□□ 0.14
ERCC3-209ENST00000494464 UBE3CQ15386 1083 aa15.93■□□□□ 0.14
ERCC3-209ENST00000494464 TTC6Q86TZ1 520 aa15.93■□□□□ 0.14
ERCC3-209ENST00000494464 WDR18Q9BV38 432 aa15.93■□□□□ 0.14
ERCC3-209ENST00000494464 TSHZ2Q9NRE2 1034 aa15.93■□□□□ 0.14
ERCC3-209ENST00000494464 ZBTB21Q9ULJ3 1066 aa15.93■□□□□ 0.14
ERCC3-209ENST00000494464 MGAMO43451 1857 aa15.93■□□□□ 0.14
ERCC3-209ENST00000494464 GNRH1P01148 92 aa15.92■□□□□ 0.14
ERCC3-209ENST00000494464 BCRP11274 1271 aa15.92■□□□□ 0.14
ERCC3-209ENST00000494464 SPP2Q13103 211 aa15.92■□□□□ 0.14
ERCC3-209ENST00000494464 KIF22Q14807 665 aa15.92■□□□□ 0.14
ERCC3-209ENST00000494464 SLC4A8Q2Y0W8 1093 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms