RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 METTL16Q86W50 562 aaKnown RBP28.25■■■□□ 2.11
CLIC3-203ENST00000494426 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.25■■■□□ 2.11
CLIC3-203ENST00000494426 SPDYE5A6NIY4 337 aa28.24■■■□□ 2.11
CLIC3-203ENST00000494426 RRP1BQ14684 758 aaKnown RBP28.24■■■□□ 2.11
CLIC3-203ENST00000494426 SLC4A8Q2Y0W8 1093 aa28.24■■■□□ 2.11
CLIC3-203ENST00000494426 FOXP4Q8IVH2 680 aaPredicted RBP28.24■■■□□ 2.11
CLIC3-203ENST00000494426 AIDAQ96BJ3 306 aa28.24■■■□□ 2.11
CLIC3-203ENST00000494426 STRBPQ96SI9 672 aaKnown RBP28.24■■■□□ 2.11
CLIC3-203ENST00000494426 DNAJC18Q9H819 358 aa28.24■■■□□ 2.11
CLIC3-203ENST00000494426 DCP1AQ9NPI6 582 aaPredicted RBP28.24■■■□□ 2.11
CLIC3-203ENST00000494426 FOXN1O15353 648 aa28.23■■■□□ 2.11
CLIC3-203ENST00000494426 TM4SF4P48230 202 aa28.23■■■□□ 2.11
CLIC3-203ENST00000494426 ERO1BQ86YB8 467 aa28.23■■■□□ 2.11
CLIC3-203ENST00000494426 REM2Q8IYK8 340 aaPredicted RBP28.23■■■□□ 2.11
CLIC3-203ENST00000494426 HERC5Q9UII4 1024 aaKnown RBP28.23■■■□□ 2.11
CLIC3-203ENST00000494426 M0R2C6 588 aa28.22■■■□□ 2.11
CLIC3-203ENST00000494426 LRRFIP1Q32MZ4 808 aaKnown RBP28.22■■■□□ 2.11
CLIC3-203ENST00000494426 OTUD5Q96G74 571 aa28.22■■■□□ 2.11
CLIC3-203ENST00000494426 SEC62Q99442 399 aaKnown RBP28.22■■■□□ 2.11
CLIC3-203ENST00000494426 BAZ2AQ9UIF9 1905 aaKnown RBP28.22■■■□□ 2.11
CLIC3-203ENST00000494426 DOCK1Q14185 1865 aa28.21■■■□□ 2.11
CLIC3-203ENST00000494426 PLCD1P51178 756 aa28.21■■■□□ 2.11
CLIC3-203ENST00000494426 EVX2Q03828 476 aa28.21■■■□□ 2.11
CLIC3-203ENST00000494426 ZMYM1Q5SVZ6 1142 aa28.21■■■□□ 2.11
CLIC3-203ENST00000494426 SCYL3Q8IZE3 742 aa28.21■■■□□ 2.11
CLIC3-203ENST00000494426 ATP8A2Q9NTI2 1148 aa28.21■■■□□ 2.11
CLIC3-203ENST00000494426 SLC4A4Q9Y6R1 1079 aa28.21■■■□□ 2.11
CLIC3-203ENST00000494426 CTNND1O60716 968 aaKnown RBP28.2■■■□□ 2.1
CLIC3-203ENST00000494426 HLA-DOAP06340 250 aa28.2■■■□□ 2.1
CLIC3-203ENST00000494426 MS4A4AQ96JQ5 239 aa28.2■■■□□ 2.1
CLIC3-203ENST00000494426 MCM9Q9NXL9 1143 aa28.2■■■□□ 2.1
CLIC3-203ENST00000494426 MANSC4A6NHS7 340 aaPredicted RBP28.19■■■□□ 2.1
CLIC3-203ENST00000494426 TRIM6-TRIM34B2RNG4 842 aa28.19■■■□□ 2.1
CLIC3-203ENST00000494426 PPATQ06203 517 aa28.19■■■□□ 2.1
CLIC3-203ENST00000494426 TTC6Q86TZ1 520 aa28.19■■■□□ 2.1
CLIC3-203ENST00000494426 ATAD5Q96QE3 1844 aa28.19■■■□□ 2.1
CLIC3-203ENST00000494426 PHIPQ8WWQ0 1821 aa28.18■■■□□ 2.1
CLIC3-203ENST00000494426 GPAA1O43292 621 aa28.18■■■□□ 2.1
CLIC3-203ENST00000494426 CYP2D6P10635 497 aa28.18■■■□□ 2.1
CLIC3-203ENST00000494426 PPIL2Q13356 520 aa28.18■■■□□ 2.1
CLIC3-203ENST00000494426 RILPL2Q969X0 211 aa28.18■■■□□ 2.1
CLIC3-203ENST00000494426 BEGAINQ9BUH8 593 aa28.18■■■□□ 2.1
CLIC3-203ENST00000494426 EHD4Q9H223 541 aa28.18■■■□□ 2.1
CLIC3-203ENST00000494426 RNF186Q9NXI6 227 aa28.18■■■□□ 2.1
CLIC3-203ENST00000494426 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.18■■■□□ 2.1
CLIC3-203ENST00000494426 TESPA1A2RU30 521 aaPredicted RBP28.17■■■□□ 2.1
CLIC3-203ENST00000494426 GSG1L2A8MUP6 293 aa28.17■■■□□ 2.1
CLIC3-203ENST00000494426 IRF6O14896 467 aa28.17■■■□□ 2.1
CLIC3-203ENST00000494426 POLR3DP05423 398 aaPredicted RBP28.17■■■□□ 2.1
CLIC3-203ENST00000494426 PTPRAP18433 802 aa28.17■■■□□ 2.1
CLIC3-203ENST00000494426 CAP2P40123 477 aa28.17■■■□□ 2.1
CLIC3-203ENST00000494426 SREBF2Q12772 1141 aa28.17■■■□□ 2.1
CLIC3-203ENST00000494426 CRACR2BQ8N4Y2 399 aaPredicted RBP28.17■■■□□ 2.1
CLIC3-203ENST00000494426 SERPINB13Q9UIV8 391 aa28.17■■■□□ 2.1
CLIC3-203ENST00000494426 NEFLP07196 543 aa28.16■■■□□ 2.1
CLIC3-203ENST00000494426 INHBEP58166 350 aa28.16■■■□□ 2.1
CLIC3-203ENST00000494426 JAG1P78504 1218 aa28.16■■■□□ 2.1
CLIC3-203ENST00000494426 GABPAQ06546 454 aa28.16■■■□□ 2.1
CLIC3-203ENST00000494426 CENPQQ7L2Z9 268 aaPredicted RBP28.16■■■□□ 2.1
CLIC3-203ENST00000494426 PTPN18Q99952 460 aa28.16■■■□□ 2.1
CLIC3-203ENST00000494426 TSKSQ9UJT2 592 aa28.16■■■□□ 2.1
CLIC3-203ENST00000494426 HSPA8P11142 646 aaKnown RBP28.15■■■□□ 2.1
CLIC3-203ENST00000494426 TICAM2Q86XR7 235 aa28.15■■■□□ 2.1
CLIC3-203ENST00000494426 PICK1Q9NRD5 415 aa28.15■■■□□ 2.1
CLIC3-203ENST00000494426 SMIM22K7EJ46 135 aa28.14■■■□□ 2.1
CLIC3-203ENST00000494426 IGF2BP3O00425 579 aaKnown RBP eCLIP28.14■■■□□ 2.1
CLIC3-203ENST00000494426 CA12O43570 354 aa28.14■■■□□ 2.1
CLIC3-203ENST00000494426 TRPA1O75762 1119 aa28.14■■■□□ 2.1
CLIC3-203ENST00000494426 GSPT1P15170 499 aaKnown RBP28.14■■■□□ 2.1
CLIC3-203ENST00000494426 CTCFP49711 727 aaPredicted RBP28.14■■■□□ 2.1
CLIC3-203ENST00000494426 GTF2A2P52657 109 aa28.14■■■□□ 2.1
CLIC3-203ENST00000494426 TTC22Q5TAA0 569 aa28.14■■■□□ 2.1
CLIC3-203ENST00000494426 TATDN1Q6P1N9 297 aa28.14■■■□□ 2.1
CLIC3-203ENST00000494426 CCDC84Q86UT8 332 aaPredicted RBP28.14■■■□□ 2.1
CLIC3-203ENST00000494426 IFNL1Q8IU54 200 aa28.14■■■□□ 2.1
CLIC3-203ENST00000494426 BRI3BPQ8WY22 251 aa28.14■■■□□ 2.1
CLIC3-203ENST00000494426 TRIM34Q9BYJ4 488 aa28.14■■■□□ 2.1
CLIC3-203ENST00000494426 KCNH4Q9UQ05 1017 aa28.14■■■□□ 2.1
CLIC3-203ENST00000494426 CYP2D7A0A087X1C5 515 aa28.13■■■□□ 2.09
CLIC3-203ENST00000494426 USP17L12C9JPN9 530 aa28.13■■■□□ 2.09
CLIC3-203ENST00000494426 USP17L21D6R901 530 aa28.13■■■□□ 2.09
CLIC3-203ENST00000494426 SHROOM1Q2M3G4 852 aaPredicted RBP28.13■■■□□ 2.09
CLIC3-203ENST00000494426 C12orf60Q5U649 245 aa28.13■■■□□ 2.09
CLIC3-203ENST00000494426 CTR9Q6PD62 1173 aa28.13■■■□□ 2.09
CLIC3-203ENST00000494426 CCDC129Q6ZRS4 1044 aa28.13■■■□□ 2.09
CLIC3-203ENST00000494426 FAM227BQ96M60 508 aa28.13■■■□□ 2.09
CLIC3-203ENST00000494426 SAGE1Q9NXZ1 904 aa28.13■■■□□ 2.09
CLIC3-203ENST00000494426 ZHX2Q9Y6X8 837 aa28.13■■■□□ 2.09
CLIC3-203ENST00000494426 GNAT2P19087 354 aa28.12■■■□□ 2.09
CLIC3-203ENST00000494426 SDSP20132 328 aa28.12■■■□□ 2.09
CLIC3-203ENST00000494426 SHMT1P34896 483 aa28.12■■■□□ 2.09
CLIC3-203ENST00000494426 EPB41L4AQ9HCS5 686 aaPredicted RBP28.12■■■□□ 2.09
CLIC3-203ENST00000494426 HELLSQ9NRZ9 838 aa28.12■■■□□ 2.09
CLIC3-203ENST00000494426 AFG3L2Q9Y4W6 797 aa28.12■■■□□ 2.09
CLIC3-203ENST00000494426 CCL15-CCL14A0A0B4J2E2 113 aa28.11■■■□□ 2.09
CLIC3-203ENST00000494426 A0A0D9SFI3 127 aa28.11■■■□□ 2.09
CLIC3-203ENST00000494426 PATL2C9JE40 543 aaKnown RBP28.11■■■□□ 2.09
CLIC3-203ENST00000494426 CCL15Q16663 113 aa28.11■■■□□ 2.09
CLIC3-203ENST00000494426 GIMAP6Q6P9H5 292 aa28.11■■■□□ 2.09
CLIC3-203ENST00000494426 GDF11O95390 407 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms