RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 PCP11498 1178 aaKnown RBP24.28■■□□□ 1.48
KPNA1-210ENST00000494339 DDIT3P35638 169 aa24.28■■□□□ 1.48
KPNA1-210ENST00000494339 PDE4BQ07343 736 aa24.28■■□□□ 1.48
KPNA1-210ENST00000494339 DLGAP5Q15398 846 aa24.28■■□□□ 1.48
KPNA1-210ENST00000494339 CCDC83Q8IWF9 413 aa24.28■■□□□ 1.48
KPNA1-210ENST00000494339 FBXL16Q8N461 479 aa24.28■■□□□ 1.48
KPNA1-210ENST00000494339 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.28■■□□□ 1.48
KPNA1-210ENST00000494339 ROBO3Q96MS0 1386 aa24.28■■□□□ 1.48
KPNA1-210ENST00000494339 SHTN1A0MZ66 631 aa24.27■■□□□ 1.48
KPNA1-210ENST00000494339 SPDYE2BA6NHP3 402 aa24.27■■□□□ 1.48
KPNA1-210ENST00000494339 SPDYE6P0CI01 402 aa24.27■■□□□ 1.48
KPNA1-210ENST00000494339 ZKSCAN3Q9BRR0 538 aa24.27■■□□□ 1.48
KPNA1-210ENST00000494339 OSBPL5Q9H0X9 879 aaPredicted RBP24.27■■□□□ 1.48
KPNA1-210ENST00000494339 NAP1L2Q9ULW6 460 aaPredicted RBP24.27■■□□□ 1.48
KPNA1-210ENST00000494339 TCP10Q12799 353 aa24.27■■□□□ 1.48
KPNA1-210ENST00000494339 ORC4O43929 436 aa24.26■■□□□ 1.47
KPNA1-210ENST00000494339 ST3GAL1Q11201 340 aa24.26■■□□□ 1.47
KPNA1-210ENST00000494339 SLC44A5Q8NCS7 719 aa24.26■■□□□ 1.47
KPNA1-210ENST00000494339 TMEM87BQ96K49 555 aa24.26■■□□□ 1.47
KPNA1-210ENST00000494339 ANGEL1Q9UNK9 670 aaKnown RBP24.26■■□□□ 1.47
KPNA1-210ENST00000494339 SH2B2O14492 632 aaPredicted RBP24.25■■□□□ 1.47
KPNA1-210ENST00000494339 IFIT3O14879 490 aaKnown RBP24.25■■□□□ 1.47
KPNA1-210ENST00000494339 GMPSP49915 693 aaPredicted RBP24.25■■□□□ 1.47
KPNA1-210ENST00000494339 TMEM67Q5HYA8 995 aa24.25■■□□□ 1.47
KPNA1-210ENST00000494339 ZFPM1Q8IX07 1006 aa24.25■■□□□ 1.47
KPNA1-210ENST00000494339 IGDCC4Q8TDY8 1250 aa24.25■■□□□ 1.47
KPNA1-210ENST00000494339 INTS4Q96HW7 963 aaKnown RBP24.25■■□□□ 1.47
KPNA1-210ENST00000494339 IDI2Q9BXS1 227 aa24.25■■□□□ 1.47
KPNA1-210ENST00000494339 FAM198AQ9UFP1 575 aa24.25■■□□□ 1.47
KPNA1-210ENST00000494339 RPS12P25398 132 aaKnown RBP24.25■■□□□ 1.47
KPNA1-210ENST00000494339 CLRN2A0PK11 232 aa24.24■■□□□ 1.47
KPNA1-210ENST00000494339 FAM47AQ5JRC9 791 aa24.24■■□□□ 1.47
KPNA1-210ENST00000494339 MKNK2Q9HBH9 465 aa24.24■■□□□ 1.47
KPNA1-210ENST00000494339 SENP2Q9HC62 589 aa24.24■■□□□ 1.47
KPNA1-210ENST00000494339 BRPF3Q9ULD4 1205 aa24.24■■□□□ 1.47
KPNA1-210ENST00000494339 DTNBO60941 627 aa24.23■■□□□ 1.47
KPNA1-210ENST00000494339 TTC6Q86TZ1 520 aa24.23■■□□□ 1.47
KPNA1-210ENST00000494339 UBAC1Q9BSL1 405 aa24.23■■□□□ 1.47
KPNA1-210ENST00000494339 CWC22Q9HCG8 908 aaKnown RBP24.23■■□□□ 1.47
KPNA1-210ENST00000494339 MYOZ2Q9NPC6 264 aa24.23■■□□□ 1.47
KPNA1-210ENST00000494339 KLF18A0A0U1RQI7 1052 aa24.23■■□□□ 1.47
KPNA1-210ENST00000494339 SART3Q15020 963 aaKnown RBP24.23■■□□□ 1.47
KPNA1-210ENST00000494339 C16orf86Q6ZW13 317 aa24.23■■□□□ 1.47
KPNA1-210ENST00000494339 LY9Q9HBG7 655 aa24.23■■□□□ 1.47
KPNA1-210ENST00000494339 PDIA3P30101 505 aaKnown RBP24.22■■□□□ 1.47
KPNA1-210ENST00000494339 EVCP57679 992 aa24.22■■□□□ 1.47
KPNA1-210ENST00000494339 MICALL2Q8IY33 904 aa24.22■■□□□ 1.47
KPNA1-210ENST00000494339 MTMR14Q8NCE2 650 aa24.22■■□□□ 1.47
KPNA1-210ENST00000494339 TMOD2Q9NZR1 351 aa24.22■■□□□ 1.47
KPNA1-210ENST00000494339 RNF181Q9P0P0 153 aa24.22■■□□□ 1.47
KPNA1-210ENST00000494339 ERICH2A1L162 156 aa24.22■■□□□ 1.47
KPNA1-210ENST00000494339 TSPY2A6NKD2 308 aa24.22■■□□□ 1.47
KPNA1-210ENST00000494339 CDK8P49336 464 aa24.22■■□□□ 1.47
KPNA1-210ENST00000494339 RBM26Q5T8P6 1007 aaKnown RBP24.22■■□□□ 1.47
KPNA1-210ENST00000494339 NFXL1Q6ZNB6 911 aa24.22■■□□□ 1.47
KPNA1-210ENST00000494339 GTF3C6Q969F1 213 aa24.22■■□□□ 1.47
KPNA1-210ENST00000494339 ZNF274Q96GC6 653 aaPredicted RBP24.22■■□□□ 1.47
KPNA1-210ENST00000494339 ZNF70Q9UC06 446 aaPredicted RBP24.22■■□□□ 1.47
KPNA1-210ENST00000494339 ZNF280AP59817 542 aaPredicted RBP24.21■■□□□ 1.47
KPNA1-210ENST00000494339 CCT2P78371 535 aaKnown RBP24.21■■□□□ 1.47
KPNA1-210ENST00000494339 SCRN1Q12765 414 aa24.21■■□□□ 1.47
KPNA1-210ENST00000494339 GPR162Q16538 588 aa24.21■■□□□ 1.47
KPNA1-210ENST00000494339 IQCA1Q86XH1 822 aa24.21■■□□□ 1.47
KPNA1-210ENST00000494339 RAB11FIP4Q86YS3 637 aa24.21■■□□□ 1.47
KPNA1-210ENST00000494339 ZSCAN29Q8IWY8 852 aaPredicted RBP24.21■■□□□ 1.47
KPNA1-210ENST00000494339 DPF2Q92785 391 aa24.21■■□□□ 1.47
KPNA1-210ENST00000494339 ZNF287Q9HBT7 754 aa24.21■■□□□ 1.47
KPNA1-210ENST00000494339 CNOT7Q9UIV1 285 aaKnown RBP24.21■■□□□ 1.47
KPNA1-210ENST00000494339 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.21■■□□□ 1.47
KPNA1-210ENST00000494339 TNKSO95271 1327 aa24.21■■□□□ 1.47
KPNA1-210ENST00000494339 TCP10L2B9ZVM9 353 aa24.2■■□□□ 1.46
KPNA1-210ENST00000494339 WNT10BO00744 389 aa24.2■■□□□ 1.46
KPNA1-210ENST00000494339 PFKFB2O60825 505 aa24.2■■□□□ 1.46
KPNA1-210ENST00000494339 NPM3O75607 178 aaKnown RBP24.2■■□□□ 1.46
KPNA1-210ENST00000494339 HLA-DOAP06340 250 aa24.2■■□□□ 1.46
KPNA1-210ENST00000494339 WTAPQ15007 396 aa24.2■■□□□ 1.46
KPNA1-210ENST00000494339 NBPF9Q3BBW0 867 aa24.2■■□□□ 1.46
KPNA1-210ENST00000494339 SPDYE2Q495Y8 402 aa24.2■■□□□ 1.46
KPNA1-210ENST00000494339 ZSCAN10Q96SZ4 725 aaPredicted RBP24.2■■□□□ 1.46
KPNA1-210ENST00000494339 DDTLA6NHG4 134 aaPredicted RBP24.2■■□□□ 1.46
KPNA1-210ENST00000494339 GOLGA8BA8MQT2 603 aa24.2■■□□□ 1.46
KPNA1-210ENST00000494339 NMT2O60551 498 aa24.2■■□□□ 1.46
KPNA1-210ENST00000494339 EGFRP00533 1210 aa24.2■■□□□ 1.46
KPNA1-210ENST00000494339 LIFRP42702 1097 aa24.2■■□□□ 1.46
KPNA1-210ENST00000494339 TFAP4Q01664 338 aa24.2■■□□□ 1.46
KPNA1-210ENST00000494339 ZNF444Q8N0Y2 327 aaPredicted RBP24.2■■□□□ 1.46
KPNA1-210ENST00000494339 ZBED3Q96IU2 234 aaPredicted RBP24.2■■□□□ 1.46
KPNA1-210ENST00000494339 MTA3Q9BTC8 594 aa24.2■■□□□ 1.46
KPNA1-210ENST00000494339 VEZTQ9HBM0 779 aa24.2■■□□□ 1.46
KPNA1-210ENST00000494339 SERPINB13Q9UIV8 391 aa24.2■■□□□ 1.46
KPNA1-210ENST00000494339 MYO1BO43795 1136 aa24.19■■□□□ 1.46
KPNA1-210ENST00000494339 RASA1P20936 1047 aa24.19■■□□□ 1.46
KPNA1-210ENST00000494339 SH3BP5LQ7L8J4 393 aa24.19■■□□□ 1.46
KPNA1-210ENST00000494339 SGMS1Q86VZ5 419 aa24.19■■□□□ 1.46
KPNA1-210ENST00000494339 NCOA5Q9HCD5 579 aaKnown RBP24.19■■□□□ 1.46
KPNA1-210ENST00000494339 SMC3Q9UQE7 1217 aa24.19■■□□□ 1.46
KPNA1-210ENST00000494339 MYH8P13535 1937 aa24.19■■□□□ 1.46
KPNA1-210ENST00000494339 ENTPD3O75355 529 aa24.18■■□□□ 1.46
KPNA1-210ENST00000494339 GABPAQ06546 454 aa24.18■■□□□ 1.46
KPNA1-210ENST00000494339 NFKBIBQ15653 356 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms