RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-222ENST00000494012 PPP4R2Q9NY27 417 aa12□□□□□ -0.49
MACF1-222ENST00000494012 SAP30BPQ9UHR5 308 aaKnown RBP12□□□□□ -0.49
MACF1-222ENST00000494012 TAOK2Q9UL54 1235 aa12□□□□□ -0.49
MACF1-222ENST00000494012 PALD1Q9ULE6 856 aa12□□□□□ -0.49
MACF1-222ENST00000494012 SLC4A4Q9Y6R1 1079 aa12□□□□□ -0.49
MACF1-222ENST00000494012 FAM155AB1AL88 458 aaPredicted RBP11.99□□□□□ -0.49
MACF1-222ENST00000494012 HIP1O00291 1037 aa11.99□□□□□ -0.49
MACF1-222ENST00000494012 GPAA1O43292 621 aa11.99□□□□□ -0.49
MACF1-222ENST00000494012 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.99□□□□□ -0.49
MACF1-222ENST00000494012 FOXP4Q8IVH2 680 aaPredicted RBP11.99□□□□□ -0.49
MACF1-222ENST00000494012 REM2Q8IYK8 340 aaPredicted RBP11.99□□□□□ -0.49
MACF1-222ENST00000494012 SDR42E1Q8WUS8 393 aa11.99□□□□□ -0.49
MACF1-222ENST00000494012 CLMNQ96JQ2 1002 aa11.99□□□□□ -0.49
MACF1-222ENST00000494012 STRBPQ96SI9 672 aaKnown RBP11.99□□□□□ -0.49
MACF1-222ENST00000494012 EHD4Q9H223 541 aa11.99□□□□□ -0.49
MACF1-222ENST00000494012 DCP1AQ9NPI6 582 aaPredicted RBP11.99□□□□□ -0.49
MACF1-222ENST00000494012 HELLSQ9NRZ9 838 aa11.99□□□□□ -0.49
MACF1-222ENST00000494012 ZNF112Q9UJU3 913 aa11.99□□□□□ -0.49
MACF1-222ENST00000494012 M0R2C6 588 aa11.98□□□□□ -0.49
MACF1-222ENST00000494012 CTNND1O60716 968 aaKnown RBP11.98□□□□□ -0.49
MACF1-222ENST00000494012 POLR3DP05423 398 aaPredicted RBP11.98□□□□□ -0.49
MACF1-222ENST00000494012 MAP2K1Q02750 393 aaPredicted RBP11.98□□□□□ -0.49
MACF1-222ENST00000494012 NOL9Q5SY16 702 aaKnown RBP11.98□□□□□ -0.49
MACF1-222ENST00000494012 GIMAP6Q6P9H5 292 aa11.98□□□□□ -0.49
MACF1-222ENST00000494012 NACAP1Q9BZK3 213 aa11.98□□□□□ -0.49
MACF1-222ENST00000494012 ELP3Q9H9T3 547 aa11.98□□□□□ -0.49
MACF1-222ENST00000494012 PICK1Q9NRD5 415 aa11.98□□□□□ -0.49
MACF1-222ENST00000494012 DIAPH3Q9NSV4 1193 aa11.98□□□□□ -0.49
MACF1-222ENST00000494012 ARPP21Q9UBL0 812 aaPredicted RBP11.98□□□□□ -0.49
MACF1-222ENST00000494012 SERPINB13Q9UIV8 391 aa11.98□□□□□ -0.49
MACF1-222ENST00000494012 SNCAIPQ9Y6H5 919 aa11.98□□□□□ -0.49
MACF1-222ENST00000494012 SPDYE5A6NIY4 337 aa11.97□□□□□ -0.49
MACF1-222ENST00000494012 PHF20L1A8MW92 1017 aa11.97□□□□□ -0.49
MACF1-222ENST00000494012 PRKAB2O43741 272 aa11.97□□□□□ -0.49
MACF1-222ENST00000494012 HSPA1AP0DMV8 641 aaKnown RBP11.97□□□□□ -0.49
MACF1-222ENST00000494012 HSPA1BP0DMV9 641 aaKnown RBP11.97□□□□□ -0.49
MACF1-222ENST00000494012 SDSP20132 328 aa11.97□□□□□ -0.49
MACF1-222ENST00000494012 INPP5BP32019 993 aa11.97□□□□□ -0.49
MACF1-222ENST00000494012 MFAP1P55081 439 aaKnown RBP11.97□□□□□ -0.49
MACF1-222ENST00000494012 SPRYD7Q5W111 196 aa11.97□□□□□ -0.49
MACF1-222ENST00000494012 METTL16Q86W50 562 aaKnown RBP11.97□□□□□ -0.49
MACF1-222ENST00000494012 ERO1BQ86YB8 467 aa11.97□□□□□ -0.49
MACF1-222ENST00000494012 SCYL3Q8IZE3 742 aa11.97□□□□□ -0.49
MACF1-222ENST00000494012 ZKSCAN4Q969J2 545 aaPredicted RBP11.97□□□□□ -0.49
MACF1-222ENST00000494012 OPTNQ96CV9 577 aa11.97□□□□□ -0.49
MACF1-222ENST00000494012 WNK4Q96J92 1243 aa11.97□□□□□ -0.49
MACF1-222ENST00000494012 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.97□□□□□ -0.49
MACF1-222ENST00000494012 PHIPQ8WWQ0 1821 aa11.97□□□□□ -0.49
MACF1-222ENST00000494012 MANSC4A6NHS7 340 aaPredicted RBP11.96□□□□□ -0.49
MACF1-222ENST00000494012 AOC2O75106 756 aa11.96□□□□□ -0.49
MACF1-222ENST00000494012 APPP05067 770 aa11.96□□□□□ -0.49
MACF1-222ENST00000494012 GSPT1P15170 499 aaKnown RBP11.96□□□□□ -0.49
MACF1-222ENST00000494012 TDO2P48775 406 aa11.96□□□□□ -0.49
MACF1-222ENST00000494012 PPATQ06203 517 aa11.96□□□□□ -0.49
MACF1-222ENST00000494012 SREBF2Q12772 1141 aa11.96□□□□□ -0.49
MACF1-222ENST00000494012 NMIQ13287 307 aaPredicted RBP11.96□□□□□ -0.49
MACF1-222ENST00000494012 SLC4A8Q2Y0W8 1093 aa11.96□□□□□ -0.49
MACF1-222ENST00000494012 MCMDC2Q4G0Z9 681 aa11.96□□□□□ -0.49
MACF1-222ENST00000494012 OTUD5Q96G74 571 aa11.96□□□□□ -0.49
MACF1-222ENST00000494012 SEC62Q99442 399 aaKnown RBP11.96□□□□□ -0.49
MACF1-222ENST00000494012 BEGAINQ9BUH8 593 aa11.96□□□□□ -0.49
MACF1-222ENST00000494012 PTPRFP10586 1907 aa11.96□□□□□ -0.5
MACF1-222ENST00000494012 A0A0D9SFI3 127 aa11.95□□□□□ -0.5
MACF1-222ENST00000494012 FAM196BA6NMK8 535 aa11.95□□□□□ -0.5
MACF1-222ENST00000494012 GSG1L2A8MUP6 293 aa11.95□□□□□ -0.5
MACF1-222ENST00000494012 CAP2P40123 477 aa11.95□□□□□ -0.5
MACF1-222ENST00000494012 PLCD1P51178 756 aa11.95□□□□□ -0.5
MACF1-222ENST00000494012 INHBEP58166 350 aa11.95□□□□□ -0.5
MACF1-222ENST00000494012 KIF23Q02241 960 aaPredicted RBP11.95□□□□□ -0.5
MACF1-222ENST00000494012 PPIL2Q13356 520 aa11.95□□□□□ -0.5
MACF1-222ENST00000494012 FAM227BQ96M60 508 aa11.95□□□□□ -0.5
MACF1-222ENST00000494012 DNAJC18Q9H819 358 aa11.95□□□□□ -0.5
MACF1-222ENST00000494012 GINM1Q9NU53 330 aa11.95□□□□□ -0.5
MACF1-222ENST00000494012 SWAP70Q9UH65 585 aa11.95□□□□□ -0.5
MACF1-222ENST00000494012 LAMA4Q16363 1823 aa11.95□□□□□ -0.5
MACF1-222ENST00000494012 ROBO3Q96MS0 1386 aa11.94□□□□□ -0.5
MACF1-222ENST00000494012 CCDC171Q6TFL3 1326 aa11.94□□□□□ -0.5
MACF1-222ENST00000494012 PATL2C9JE40 543 aaKnown RBP11.94□□□□□ -0.5
MACF1-222ENST00000494012 USP17L12C9JPN9 530 aa11.94□□□□□ -0.5
MACF1-222ENST00000494012 USP17L21D6R901 530 aa11.94□□□□□ -0.5
MACF1-222ENST00000494012 CA12O43570 354 aa11.94□□□□□ -0.5
MACF1-222ENST00000494012 ASNSP08243 561 aa11.94□□□□□ -0.5
MACF1-222ENST00000494012 GTF2A2P52657 109 aa11.94□□□□□ -0.5
MACF1-222ENST00000494012 MKRN3Q13064 507 aaKnown RBP11.94□□□□□ -0.5
MACF1-222ENST00000494012 SBK1Q52WX2 424 aa11.94□□□□□ -0.5
MACF1-222ENST00000494012 BMP2KLQ5H9B9 411 aa11.94□□□□□ -0.5
MACF1-222ENST00000494012 C12orf60Q5U649 245 aa11.94□□□□□ -0.5
MACF1-222ENST00000494012 TATDN1Q6P1N9 297 aa11.94□□□□□ -0.5
MACF1-222ENST00000494012 CWC27Q6UX04 472 aaKnown RBP11.94□□□□□ -0.5
MACF1-222ENST00000494012 IFNL3Q8IZI9 196 aa11.94□□□□□ -0.5
MACF1-222ENST00000494012 RUFY2Q8WXA3 655 aa11.94□□□□□ -0.5
MACF1-222ENST00000494012 TBC1D2Q9BYX2 928 aa11.94□□□□□ -0.5
MACF1-222ENST00000494012 NAPBQ9H115 298 aa11.94□□□□□ -0.5
MACF1-222ENST00000494012 RAD50Q92878 1312 aa11.93□□□□□ -0.5
MACF1-222ENST00000494012 SLURP2P0DP57 97 aa11.93□□□□□ -0.5
MACF1-222ENST00000494012 CYP2D6P10635 497 aa11.93□□□□□ -0.5
MACF1-222ENST00000494012 PTPRAP18433 802 aa11.93□□□□□ -0.5
MACF1-222ENST00000494012 GABPAQ06546 454 aa11.93□□□□□ -0.5
MACF1-222ENST00000494012 SNAPC2Q13487 334 aa11.93□□□□□ -0.5
MACF1-222ENST00000494012 CTR9Q6PD62 1173 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms