RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 DHX36Q9H2U1 1008 aaKnown RBP28.94■■■□□ 2.22
RHBDD3-206ENST00000493894 PIH1D3Q9NQM4 214 aaKnown RBP28.94■■■□□ 2.22
RHBDD3-206ENST00000493894 HERC5Q9UII4 1024 aaKnown RBP28.94■■■□□ 2.22
RHBDD3-206ENST00000493894 SLC45A1Q9Y2W3 748 aa28.94■■■□□ 2.22
RHBDD3-206ENST00000493894 MYO5AQ9Y4I1 1855 aaKnown RBP28.93■■■□□ 2.22
RHBDD3-206ENST00000493894 FOCADQ5VW36 1801 aa28.93■■■□□ 2.22
RHBDD3-206ENST00000493894 ATAD5Q96QE3 1844 aa28.93■■■□□ 2.22
RHBDD3-206ENST00000493894 PSMC4P43686 418 aa28.93■■■□□ 2.22
RHBDD3-206ENST00000493894 CCDC84Q86UT8 332 aaPredicted RBP28.93■■■□□ 2.22
RHBDD3-206ENST00000493894 PRPF38BQ5VTL8 546 aaKnown RBP28.92■■■□□ 2.22
RHBDD3-206ENST00000493894 AACSQ86V21 672 aa28.92■■■□□ 2.22
RHBDD3-206ENST00000493894 TRIM47Q96LD4 638 aa28.92■■■□□ 2.22
RHBDD3-206ENST00000493894 TMEM106CQ9BVX2 250 aa28.92■■■□□ 2.22
RHBDD3-206ENST00000493894 PI4KBQ9UBF8 816 aa28.92■■■□□ 2.22
RHBDD3-206ENST00000493894 DDX19BQ9UMR2 479 aa28.92■■■□□ 2.22
RHBDD3-206ENST00000493894 FLT1P17948 1338 aa28.92■■■□□ 2.22
RHBDD3-206ENST00000493894 CDK5RAP2Q96SN8 1893 aa28.91■■■□□ 2.22
RHBDD3-206ENST00000493894 IDH1O75874 414 aaKnown RBP28.91■■■□□ 2.22
RHBDD3-206ENST00000493894 FMNL1O95466 1100 aaPredicted RBP28.91■■■□□ 2.22
RHBDD3-206ENST00000493894 BCRP11274 1271 aa28.91■■■□□ 2.22
RHBDD3-206ENST00000493894 MAPKAPK5Q8IW41 473 aa28.91■■■□□ 2.22
RHBDD3-206ENST00000493894 TGFBRAP1Q8WUH2 860 aa28.91■■■□□ 2.22
RHBDD3-206ENST00000493894 TBC1D2Q9BYX2 928 aa28.91■■■□□ 2.22
RHBDD3-206ENST00000493894 SIPA1L1O43166 1804 aa28.91■■■□□ 2.22
RHBDD3-206ENST00000493894 HOXD10P28358 340 aa28.9■■■□□ 2.22
RHBDD3-206ENST00000493894 CTGFP29279 349 aa28.9■■■□□ 2.22
RHBDD3-206ENST00000493894 SRRDQ9UH36 339 aa28.9■■■□□ 2.22
RHBDD3-206ENST00000493894 AGTPBP1Q9UPW5 1226 aa28.9■■■□□ 2.22
RHBDD3-206ENST00000493894 OSBPP22059 807 aa28.89■■■□□ 2.22
RHBDD3-206ENST00000493894 CAP2P40123 477 aa28.89■■■□□ 2.22
RHBDD3-206ENST00000493894 SMCR8Q8TEV9 937 aaPredicted RBP28.89■■■□□ 2.22
RHBDD3-206ENST00000493894 SH3TC2Q8TF17 1288 aa28.89■■■□□ 2.22
RHBDD3-206ENST00000493894 COG6Q9Y2V7 657 aa28.89■■■□□ 2.22
RHBDD3-206ENST00000493894 HMMRO75330 724 aa28.88■■■□□ 2.21
RHBDD3-206ENST00000493894 CYP7A1P22680 504 aa28.88■■■□□ 2.21
RHBDD3-206ENST00000493894 FCGRTP55899 365 aa28.88■■■□□ 2.21
RHBDD3-206ENST00000493894 RPAP2Q8IXW5 612 aaPredicted RBP28.88■■■□□ 2.21
RHBDD3-206ENST00000493894 ZNF280CQ8ND82 737 aa28.88■■■□□ 2.21
RHBDD3-206ENST00000493894 RHPN1Q8TCX5 695 aa28.88■■■□□ 2.21
RHBDD3-206ENST00000493894 TRIM34Q9BYJ4 488 aa28.88■■■□□ 2.21
RHBDD3-206ENST00000493894 IL1RAPL2Q9NP60 686 aa28.88■■■□□ 2.21
RHBDD3-206ENST00000493894 LOC285556D6RIA3 1793 aa28.88■■■□□ 2.21
RHBDD3-206ENST00000493894 CERS3Q8IU89 383 aa28.87■■■□□ 2.21
RHBDD3-206ENST00000493894 PROCA1Q8NCQ7 364 aaPredicted RBP28.87■■■□□ 2.21
RHBDD3-206ENST00000493894 RCAN3Q9UKA8 241 aa28.87■■■□□ 2.21
RHBDD3-206ENST00000493894 PNMA3Q9UL41 463 aa28.87■■■□□ 2.21
RHBDD3-206ENST00000493894 NDUFB9Q9Y6M9 179 aa28.87■■■□□ 2.21
RHBDD3-206ENST00000493894 KIAA0100Q14667 2235 aaKnown RBP28.87■■■□□ 2.21
RHBDD3-206ENST00000493894 MYPNQ86TC9 1320 aa28.87■■■□□ 2.21
RHBDD3-206ENST00000493894 USP17L5A8MUK1 530 aa28.86■■■□□ 2.21
RHBDD3-206ENST00000493894 EN2P19622 333 aaPredicted RBP28.86■■■□□ 2.21
RHBDD3-206ENST00000493894 SPP2Q13103 211 aa28.86■■■□□ 2.21
RHBDD3-206ENST00000493894 SLC4A8Q2Y0W8 1093 aa28.86■■■□□ 2.21
RHBDD3-206ENST00000493894 CRACR2BQ8N4Y2 399 aaPredicted RBP28.86■■■□□ 2.21
RHBDD3-206ENST00000493894 RAET1EQ8TD07 263 aa28.86■■■□□ 2.21
RHBDD3-206ENST00000493894 CHMP4BQ9H444 224 aaKnown RBP28.86■■■□□ 2.21
RHBDD3-206ENST00000493894 AS3MTQ9HBK9 375 aa28.86■■■□□ 2.21
RHBDD3-206ENST00000493894 MYCP01106 439 aaPredicted RBP28.85■■■□□ 2.21
RHBDD3-206ENST00000493894 HLA-DOAP06340 250 aa28.85■■■□□ 2.21
RHBDD3-206ENST00000493894 DYNLL1P63167 89 aaKnown RBP28.85■■■□□ 2.21
RHBDD3-206ENST00000493894 MAP3K12Q12852 859 aa28.85■■■□□ 2.21
RHBDD3-206ENST00000493894 RRP1BQ14684 758 aaKnown RBP28.85■■■□□ 2.21
RHBDD3-206ENST00000493894 TMED8Q6PL24 325 aaPredicted RBP28.85■■■□□ 2.21
RHBDD3-206ENST00000493894 MAGEB6Q8N7X4 407 aa28.85■■■□□ 2.21
RHBDD3-206ENST00000493894 ZBTB40Q9NUA8 1239 aa28.85■■■□□ 2.21
RHBDD3-206ENST00000493894 MGAMO43451 1857 aa28.85■■■□□ 2.21
RHBDD3-206ENST00000493894 TREML2Q5T2D2 321 aa28.84■■■□□ 2.21
RHBDD3-206ENST00000493894 FOXP4Q8IVH2 680 aaPredicted RBP28.84■■■□□ 2.21
RHBDD3-206ENST00000493894 CLASRPQ8N2M8 674 aaKnown RBP28.84■■■□□ 2.21
RHBDD3-206ENST00000493894 MIGA1Q8NAN2 632 aa28.84■■■□□ 2.21
RHBDD3-206ENST00000493894 KIF1BPQ96EK5 621 aa28.84■■■□□ 2.21
RHBDD3-206ENST00000493894 ANTXR1Q9H6X2 564 aa28.84■■■□□ 2.21
RHBDD3-206ENST00000493894 PALD1Q9ULE6 856 aa28.84■■■□□ 2.21
RHBDD3-206ENST00000493894 BRCA2P51587 3418 aa28.84■■■□□ 2.21
RHBDD3-206ENST00000493894 APBB1O00213 710 aa28.83■■■□□ 2.21
RHBDD3-206ENST00000493894 ASNSP08243 561 aa28.83■■■□□ 2.21
RHBDD3-206ENST00000493894 DNAJC18Q9H819 358 aa28.83■■■□□ 2.21
RHBDD3-206ENST00000493894 SAP30BPQ9UHR5 308 aaKnown RBP28.83■■■□□ 2.21
RHBDD3-206ENST00000493894 HMGCS2P54868 508 aa28.82■■■□□ 2.2
RHBDD3-206ENST00000493894 PRKCZQ05513 592 aa28.82■■■□□ 2.2
RHBDD3-206ENST00000493894 PABPC4Q13310 644 aaKnown RBP eCLIP28.82■■■□□ 2.2
RHBDD3-206ENST00000493894 METTL16Q86W50 562 aaKnown RBP28.82■■■□□ 2.2
RHBDD3-206ENST00000493894 GRK4P32298 578 aa28.81■■■□□ 2.2
RHBDD3-206ENST00000493894 USP5P45974 858 aa28.81■■■□□ 2.2
RHBDD3-206ENST00000493894 TTF1Q15361 905 aaPredicted RBP28.81■■■□□ 2.2
RHBDD3-206ENST00000493894 IFIT2P09913 472 aaKnown RBP28.8■■■□□ 2.2
RHBDD3-206ENST00000493894 MKI67P46013 3256 aaKnown RBP28.8■■■□□ 2.2
RHBDD3-206ENST00000493894 MYH1P12882 1939 aa28.79■■■□□ 2.2
RHBDD3-206ENST00000493894 TNPO2O14787 897 aaKnown RBP28.79■■■□□ 2.2
RHBDD3-206ENST00000493894 SH3D19Q5HYK7 790 aa28.79■■■□□ 2.2
RHBDD3-206ENST00000493894 SIRT2Q8IXJ6 389 aa28.79■■■□□ 2.2
RHBDD3-206ENST00000493894 ANKRD13CQ8N6S4 541 aa28.79■■■□□ 2.2
RHBDD3-206ENST00000493894 WDR18Q9BV38 432 aa28.79■■■□□ 2.2
RHBDD3-206ENST00000493894 GINM1Q9NU53 330 aa28.79■■■□□ 2.2
RHBDD3-206ENST00000493894 RAB11FIP3O75154 756 aa28.78■■■□□ 2.2
RHBDD3-206ENST00000493894 GDF11O95390 407 aa28.78■■■□□ 2.2
RHBDD3-206ENST00000493894 MTMR2Q13614 643 aa28.78■■■□□ 2.2
RHBDD3-206ENST00000493894 FAM110CQ1W6H9 321 aa28.78■■■□□ 2.2
RHBDD3-206ENST00000493894 SLAIN1Q8ND83 568 aa28.77■■■□□ 2.2
RHBDD3-206ENST00000493894 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms