RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 IQCB1Q15051 598 aa7.76□□□□□ -1.17
VPS13B-205ENST00000493587 C16orf87Q6PH81 154 aa7.76□□□□□ -1.17
VPS13B-205ENST00000493587 CCDC121Q6ZUS5 278 aa7.76□□□□□ -1.17
VPS13B-205ENST00000493587 TMEM87AQ8NBN3 555 aa7.76□□□□□ -1.17
VPS13B-205ENST00000493587 TRIM58Q8NG06 486 aa7.76□□□□□ -1.17
VPS13B-205ENST00000493587 EHD4Q9H223 541 aa7.76□□□□□ -1.17
VPS13B-205ENST00000493587 SLC40A1Q9NP59 571 aa7.76□□□□□ -1.17
VPS13B-205ENST00000493587 MEFVO15553 781 aaPredicted RBP7.76□□□□□ -1.17
VPS13B-205ENST00000493587 SYT1P21579 422 aa7.76□□□□□ -1.17
VPS13B-205ENST00000493587 MAGEA10P43363 369 aaPredicted RBP7.76□□□□□ -1.17
VPS13B-205ENST00000493587 MECOMQ03112 1051 aa7.76□□□□□ -1.17
VPS13B-205ENST00000493587 WLSQ5T9L3 541 aa7.76□□□□□ -1.17
VPS13B-205ENST00000493587 TMEM110Q86TL2 294 aa7.76□□□□□ -1.17
VPS13B-205ENST00000493587 NSMCE1Q8WV22 266 aa7.76□□□□□ -1.17
VPS13B-205ENST00000493587 DDX19AQ9NUU7 478 aaKnown RBP7.76□□□□□ -1.17
VPS13B-205ENST00000493587 AATFQ9NY61 560 aaKnown RBP eCLIP7.76□□□□□ -1.17
VPS13B-205ENST00000493587 TMEM94Q12767 1356 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.75□□□□□ -1.17
VPS13B-205ENST00000493587 CREB3O43889 395 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 GSPT1P15170 499 aaKnown RBP7.75□□□□□ -1.17
VPS13B-205ENST00000493587 IRAK1P51617 712 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 MAP3K9P80192 1104 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 MPP3Q13368 585 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 BEND6Q5SZJ8 279 aaPredicted RBP7.75□□□□□ -1.17
VPS13B-205ENST00000493587 MFN1Q8IWA4 741 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 RIN2Q8WYP3 895 aaPredicted RBP7.75□□□□□ -1.17
VPS13B-205ENST00000493587 COG3Q96JB2 828 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 MPHOSPH8Q99549 860 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 TFIP11Q9UBB9 837 aaKnown RBP7.75□□□□□ -1.17
VPS13B-205ENST00000493587 PARP3Q9Y6F1 533 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 MYH3P11055 1940 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 AHDC1Q5TGY3 1603 aaPredicted RBP7.75□□□□□ -1.17
VPS13B-205ENST00000493587 CSB-PGBD3P0DP91 1061 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 PRKAR2BP31323 418 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 GJA8P48165 433 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 IFT88Q13099 833 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 DZIP1Q86YF9 867 aaKnown RBP7.75□□□□□ -1.17
VPS13B-205ENST00000493587 AOPEPQ8N6M6 819 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 PDILTQ8N807 584 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 WHAMMQ8TF30 809 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 ATRIPQ8WXE1 791 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 FAM167BQ9BTA0 163 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 UNC45AQ9H3U1 944 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 TMOD4Q9NZQ9 345 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 PHF8Q9UPP1 1060 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 SPDYE3A6NKU9 549 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 AHCYL1O43865 530 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 MXRA7P84157 204 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 KARSQ15046 597 aaKnown RBP7.75□□□□□ -1.17
VPS13B-205ENST00000493587 WHAMMP3Q1A5X7 153 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 HSP90AB2PQ58FF8 381 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 SMARCC2Q8TAQ2 1214 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 DHX58Q96C10 678 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 SPATA32Q96LK8 384 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 ALS2CR12Q96Q35 445 aa7.75□□□□□ -1.17
VPS13B-205ENST00000493587 TCHHQ07283 1943 aa7.74□□□□□ -1.17
VPS13B-205ENST00000493587 GNAI3P08754 354 aa7.74□□□□□ -1.17
VPS13B-205ENST00000493587 SMTNP53814 917 aa7.74□□□□□ -1.17
VPS13B-205ENST00000493587 POLE2P56282 527 aa7.74□□□□□ -1.17
VPS13B-205ENST00000493587 MYBPC2Q14324 1141 aa7.74□□□□□ -1.17
VPS13B-205ENST00000493587 KIF4BQ2VIQ3 1234 aa7.74□□□□□ -1.17
VPS13B-205ENST00000493587 TTC22Q5TAA0 569 aa7.74□□□□□ -1.17
VPS13B-205ENST00000493587 MSL1Q68DK7 614 aa7.74□□□□□ -1.17
VPS13B-205ENST00000493587 CWF19L1Q69YN2 538 aaKnown RBP7.74□□□□□ -1.17
VPS13B-205ENST00000493587 PRPF40BQ6NWY9 871 aaKnown RBP7.74□□□□□ -1.17
VPS13B-205ENST00000493587 CEP57L1Q8IYX8 460 aa7.74□□□□□ -1.17
VPS13B-205ENST00000493587 OR8K1Q8NGG5 319 aa7.74□□□□□ -1.17
VPS13B-205ENST00000493587 KCNV2Q8TDN2 545 aa7.74□□□□□ -1.17
VPS13B-205ENST00000493587 TRPC6Q9Y210 931 aa7.74□□□□□ -1.17
VPS13B-205ENST00000493587 DOCK2Q92608 1830 aa7.74□□□□□ -1.17
VPS13B-205ENST00000493587 LRP5O75197 1615 aa7.74□□□□□ -1.17
VPS13B-205ENST00000493587 LGR5O75473 907 aa7.74□□□□□ -1.17
VPS13B-205ENST00000493587 SDSP20132 328 aa7.74□□□□□ -1.17
VPS13B-205ENST00000493587 CUL4AQ13619 759 aa7.74□□□□□ -1.17
VPS13B-205ENST00000493587 CDCA2Q69YH5 1023 aaPredicted RBP7.74□□□□□ -1.17
VPS13B-205ENST00000493587 FAM173BQ6P4H8 233 aa7.74□□□□□ -1.17
VPS13B-205ENST00000493587 CCDC47Q96A33 483 aaKnown RBP7.74□□□□□ -1.17
VPS13B-205ENST00000493587 SLC39A2Q9NP94 309 aa7.74□□□□□ -1.17
VPS13B-205ENST00000493587 INCENPQ9NQS7 918 aa7.74□□□□□ -1.17
VPS13B-205ENST00000493587 ZNHIT6Q9NWK9 470 aaKnown RBP7.74□□□□□ -1.17
VPS13B-205ENST00000493587 HYPKQ9NX55 129 aa7.74□□□□□ -1.17
VPS13B-205ENST00000493587 UBAP1Q9NZ09 502 aa7.74□□□□□ -1.17
VPS13B-205ENST00000493587 IFNKQ9P0W0 207 aa7.74□□□□□ -1.17
VPS13B-205ENST00000493587 MYH7P12883 1935 aa7.74□□□□□ -1.17
VPS13B-205ENST00000493587 GOLGA6L9A6NEM1 432 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 FSBPO95073 299 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 DESP17661 470 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 ROR2Q01974 943 aaKnown RBP7.73□□□□□ -1.17
VPS13B-205ENST00000493587 CCDC13Q8IYE1 715 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 EXOC8Q8IYI6 725 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 C8orf58Q8NAV2 365 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 CTNNBL1Q8WYA6 563 aaPredicted RBP7.73□□□□□ -1.17
VPS13B-205ENST00000493587 HOOK2Q96ED9 719 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 RTEL1Q9NZ71 1219 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 MYO1AQ9UBC5 1043 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 NWD2Q9ULI1 1742 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 ECM29Q5VYK3 1845 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 A0A087WWV3 80 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 M0R2C6 588 aa7.73□□□□□ -1.17
VPS13B-205ENST00000493587 ZNF202O95125 648 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms