RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 FOCADQ5VW36 1801 aa13.74□□□□□ -0.21
LSM2-214ENST00000493387 POLR2AP24928 1970 aaKnown RBP13.73□□□□□ -0.21
LSM2-214ENST00000493387 PLCD1P51178 756 aa13.73□□□□□ -0.21
LSM2-214ENST00000493387 MAP3K10Q02779 954 aa13.73□□□□□ -0.21
LSM2-214ENST00000493387 PDE4BQ07343 736 aa13.73□□□□□ -0.21
LSM2-214ENST00000493387 FSTL1Q12841 308 aa13.73□□□□□ -0.21
LSM2-214ENST00000493387 NBPF12Q5TAG4 269 aaPredicted RBP13.73□□□□□ -0.21
LSM2-214ENST00000493387 CDCA5Q96FF9 252 aa13.73□□□□□ -0.21
LSM2-214ENST00000493387 BACH2Q9BYV9 841 aa13.73□□□□□ -0.21
LSM2-214ENST00000493387 RNF41Q9H4P4 317 aaPredicted RBP13.73□□□□□ -0.21
LSM2-214ENST00000493387 CDK5RAP2Q96SN8 1893 aa13.72□□□□□ -0.21
LSM2-214ENST00000493387 PPP1R12BO60237 982 aaPredicted RBP13.72□□□□□ -0.21
LSM2-214ENST00000493387 CYP2D6P10635 497 aa13.72□□□□□ -0.21
LSM2-214ENST00000493387 ZKSCAN1P17029 563 aaPredicted RBP13.72□□□□□ -0.21
LSM2-214ENST00000493387 NECTIN1Q15223 517 aa13.72□□□□□ -0.21
LSM2-214ENST00000493387 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.72□□□□□ -0.21
LSM2-214ENST00000493387 SCAF8Q9UPN6 1271 aaKnown RBP13.72□□□□□ -0.21
LSM2-214ENST00000493387 MYH1P12882 1939 aa13.72□□□□□ -0.21
LSM2-214ENST00000493387 ROBO3Q96MS0 1386 aa13.71□□□□□ -0.21
LSM2-214ENST00000493387 UTRNP46939 3433 aa13.71□□□□□ -0.21
LSM2-214ENST00000493387 ITGBL1O95965 494 aaPredicted RBP13.71□□□□□ -0.21
LSM2-214ENST00000493387 HSPA4P34932 840 aa13.71□□□□□ -0.21
LSM2-214ENST00000493387 FKBP1BP68106 108 aa13.71□□□□□ -0.21
LSM2-214ENST00000493387 GABPAQ06546 454 aa13.71□□□□□ -0.21
LSM2-214ENST00000493387 PRAMEF18Q5VWM3 479 aa13.71□□□□□ -0.21
LSM2-214ENST00000493387 CREB3L3Q68CJ9 461 aa13.71□□□□□ -0.21
LSM2-214ENST00000493387 C16orf86Q6ZW13 317 aa13.71□□□□□ -0.21
LSM2-214ENST00000493387 ARMC9Q7Z3E5 817 aa13.71□□□□□ -0.21
LSM2-214ENST00000493387 ZNF341Q9BYN7 854 aa13.71□□□□□ -0.21
LSM2-214ENST00000493387 MKNK2Q9HBH9 465 aa13.71□□□□□ -0.21
LSM2-214ENST00000493387 NAV1Q8NEY1 1877 aa13.71□□□□□ -0.21
LSM2-214ENST00000493387 CYP2D7A0A087X1C5 515 aa13.7□□□□□ -0.22
LSM2-214ENST00000493387 SLC27A2O14975 620 aa13.7□□□□□ -0.22
LSM2-214ENST00000493387 CYP21A2P08686 494 aa13.7□□□□□ -0.22
LSM2-214ENST00000493387 FGRP09769 529 aa13.7□□□□□ -0.22
LSM2-214ENST00000493387 CDK8P49336 464 aa13.7□□□□□ -0.22
LSM2-214ENST00000493387 HAND2P61296 217 aa13.7□□□□□ -0.22
LSM2-214ENST00000493387 TRDNQ13061 729 aa13.7□□□□□ -0.22
LSM2-214ENST00000493387 KRT32Q14532 448 aa13.7□□□□□ -0.22
LSM2-214ENST00000493387 TSGA10IPQ3SY00 556 aa13.7□□□□□ -0.22
LSM2-214ENST00000493387 AKNAD1Q5T1N1 836 aa13.7□□□□□ -0.22
LSM2-214ENST00000493387 MFSD6Q6ZSS7 791 aa13.7□□□□□ -0.22
LSM2-214ENST00000493387 STAG1Q8WVM7 1258 aa13.7□□□□□ -0.22
LSM2-214ENST00000493387 KCNB2Q92953 911 aa13.7□□□□□ -0.22
LSM2-214ENST00000493387 CCDC17Q96LX7 622 aa13.7□□□□□ -0.22
LSM2-214ENST00000493387 CNNM2Q9H8M5 875 aa13.7□□□□□ -0.22
LSM2-214ENST00000493387 GINM1Q9NU53 330 aa13.7□□□□□ -0.22
LSM2-214ENST00000493387 BAZ2AQ9UIF9 1905 aaKnown RBP13.7□□□□□ -0.22
LSM2-214ENST00000493387 UNCXA6NJT0 531 aa13.69□□□□□ -0.22
LSM2-214ENST00000493387 TRAF5O00463 557 aa13.69□□□□□ -0.22
LSM2-214ENST00000493387 ORC4O43929 436 aa13.69□□□□□ -0.22
LSM2-214ENST00000493387 SEC24BO95487 1268 aa13.69□□□□□ -0.22
LSM2-214ENST00000493387 IREB2P48200 963 aaKnown RBP13.69□□□□□ -0.22
LSM2-214ENST00000493387 CTDSPL2Q05D32 466 aa13.69□□□□□ -0.22
LSM2-214ENST00000493387 SLC4A8Q2Y0W8 1093 aa13.69□□□□□ -0.22
LSM2-214ENST00000493387 TATDN1Q6P1N9 297 aa13.69□□□□□ -0.22
LSM2-214ENST00000493387 MIGA2Q7L4E1 593 aa13.69□□□□□ -0.22
LSM2-214ENST00000493387 CDAN1Q8IWY9 1227 aa13.69□□□□□ -0.22
LSM2-214ENST00000493387 ZNF444Q8N0Y2 327 aaPredicted RBP13.69□□□□□ -0.22
LSM2-214ENST00000493387 C2orf69Q8N8R5 385 aa13.69□□□□□ -0.22
LSM2-214ENST00000493387 DYNLL2Q96FJ2 89 aa13.69□□□□□ -0.22
LSM2-214ENST00000493387 KRT23Q9C075 422 aa13.69□□□□□ -0.22
LSM2-214ENST00000493387 ZNF112Q9UJU3 913 aa13.69□□□□□ -0.22
LSM2-214ENST00000493387 DDX60LQ5H9U9 1706 aaKnown RBP13.68□□□□□ -0.22
LSM2-214ENST00000493387 CTNND1O60716 968 aaKnown RBP13.68□□□□□ -0.22
LSM2-214ENST00000493387 CELF2O95319 508 aaKnown RBP13.68□□□□□ -0.22
LSM2-214ENST00000493387 ANAPC15P60006 121 aa13.68□□□□□ -0.22
LSM2-214ENST00000493387 TTLL12Q14166 644 aaPredicted RBP13.68□□□□□ -0.22
LSM2-214ENST00000493387 MAP3K11Q16584 847 aa13.68□□□□□ -0.22
LSM2-214ENST00000493387 CERKLQ49MI3 558 aaPredicted RBP13.68□□□□□ -0.22
LSM2-214ENST00000493387 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.68□□□□□ -0.22
LSM2-214ENST00000493387 PASKQ96RG2 1323 aa13.67□□□□□ -0.22
LSM2-214ENST00000493387 USP2O75604 605 aaPredicted RBP13.67□□□□□ -0.22
LSM2-214ENST00000493387 PSMA5P28066 241 aa13.67□□□□□ -0.22
LSM2-214ENST00000493387 SHMT1P34896 483 aa13.67□□□□□ -0.22
LSM2-214ENST00000493387 MAP3K9P80192 1104 aa13.67□□□□□ -0.22
LSM2-214ENST00000493387 PPP4R3BQ5MIZ7 849 aa13.67□□□□□ -0.22
LSM2-214ENST00000493387 RALYLQ86SE5 291 aaKnown RBP13.67□□□□□ -0.22
LSM2-214ENST00000493387 TBC1D10CQ8IV04 446 aa13.67□□□□□ -0.22
LSM2-214ENST00000493387 NCOA7Q8NI08 942 aa13.67□□□□□ -0.22
LSM2-214ENST00000493387 ESR2Q92731 530 aa13.67□□□□□ -0.22
LSM2-214ENST00000493387 KLRG1Q96E93 195 aa13.67□□□□□ -0.22
LSM2-214ENST00000493387 DNAJC18Q9H819 358 aa13.67□□□□□ -0.22
LSM2-214ENST00000493387 ZNF408Q9H9D4 720 aa13.67□□□□□ -0.22
LSM2-214ENST00000493387 GBA2Q9HCG7 927 aaPredicted RBP13.67□□□□□ -0.22
LSM2-214ENST00000493387 CABP5Q9NP86 173 aa13.67□□□□□ -0.22
LSM2-214ENST00000493387 TOMM22Q9NS69 142 aa13.67□□□□□ -0.22
LSM2-214ENST00000493387 PHF20L1A8MW92 1017 aa13.66□□□□□ -0.22
LSM2-214ENST00000493387 E7EWF7 191 aa13.66□□□□□ -0.22
LSM2-214ENST00000493387 HMGB1P09429 215 aaKnown RBP13.66□□□□□ -0.22
LSM2-214ENST00000493387 CAP2P40123 477 aa13.66□□□□□ -0.22
LSM2-214ENST00000493387 CCDC178Q5BJE1 867 aa13.66□□□□□ -0.22
LSM2-214ENST00000493387 DLK2Q6UY11 383 aa13.66□□□□□ -0.22
LSM2-214ENST00000493387 STK11IPQ8N1F8 1099 aa13.66□□□□□ -0.22
LSM2-214ENST00000493387 SLC44A5Q8NCS7 719 aa13.66□□□□□ -0.22
LSM2-214ENST00000493387 WRNIP1Q96S55 665 aa13.66□□□□□ -0.22
LSM2-214ENST00000493387 C22orf23Q9BZE7 217 aa13.66□□□□□ -0.22
LSM2-214ENST00000493387 NBPF3Q9H094 633 aa13.66□□□□□ -0.22
LSM2-214ENST00000493387 ANGEL1Q9UNK9 670 aaKnown RBP13.66□□□□□ -0.22
LSM2-214ENST00000493387 FAM196BA6NMK8 535 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms