RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 EDN3P14138 238 aa9.32□□□□□ -0.92
TPR-208ENST00000492973 BAG6P46379 1132 aa9.32□□□□□ -0.92
TPR-208ENST00000492973 DSC3Q14574 896 aa9.32□□□□□ -0.92
TPR-208ENST00000492973 TREHO43280 583 aa9.31□□□□□ -0.92
TPR-208ENST00000492973 SMNDC1O75940 238 aaKnown RBP eCLIP9.31□□□□□ -0.92
TPR-208ENST00000492973 GDF11O95390 407 aa9.31□□□□□ -0.92
TPR-208ENST00000492973 PEAR1Q5VY43 1037 aaPredicted RBP9.31□□□□□ -0.92
TPR-208ENST00000492973 USPL1Q5W0Q7 1092 aa9.31□□□□□ -0.92
TPR-208ENST00000492973 ADAMTSL4Q6UY14 1074 aa9.31□□□□□ -0.92
TPR-208ENST00000492973 ASB16Q96NS5 453 aa9.31□□□□□ -0.92
TPR-208ENST00000492973 DNAJC25Q9H1X3 360 aa9.31□□□□□ -0.92
TPR-208ENST00000492973 MED1Q15648 1581 aaPredicted RBP9.31□□□□□ -0.92
TPR-208ENST00000492973 NRKQ7Z2Y5 1582 aa9.31□□□□□ -0.92
TPR-208ENST00000492973 ALS2Q96Q42 1657 aa9.31□□□□□ -0.92
TPR-208ENST00000492973 AKAP12Q02952 1782 aa9.31□□□□□ -0.92
TPR-208ENST00000492973 COL22A1Q8NFW1 1626 aaPredicted RBP9.31□□□□□ -0.92
TPR-208ENST00000492973 OVOS2A0A0J9YW53 1432 aa9.31□□□□□ -0.92
TPR-208ENST00000492973 OVOS2Q6IE36 1432 aa9.31□□□□□ -0.92
TPR-208ENST00000492973 SHPRHQ149N8 1683 aa9.3□□□□□ -0.92
TPR-208ENST00000492973 EIF1AYO14602 144 aaKnown RBP9.3□□□□□ -0.92
TPR-208ENST00000492973 CPNE3O75131 537 aaKnown RBP9.3□□□□□ -0.92
TPR-208ENST00000492973 GCP02774 474 aa9.3□□□□□ -0.92
TPR-208ENST00000492973 POLR3DP05423 398 aaPredicted RBP9.3□□□□□ -0.92
TPR-208ENST00000492973 TRAPPC3LQ5T215 181 aa9.3□□□□□ -0.92
TPR-208ENST00000492973 CEP135Q66GS9 1140 aa9.3□□□□□ -0.92
TPR-208ENST00000492973 GDF6Q6KF10 455 aaPredicted RBP9.3□□□□□ -0.92
TPR-208ENST00000492973 WFDC8Q8IUA0 241 aa9.3□□□□□ -0.92
TPR-208ENST00000492973 GALNT12Q8IXK2 581 aa9.3□□□□□ -0.92
TPR-208ENST00000492973 DMRTC2Q8IXT2 367 aaPredicted RBP9.3□□□□□ -0.92
TPR-208ENST00000492973 CACTIN-AS1Q8N1I8 211 aa9.3□□□□□ -0.92
TPR-208ENST00000492973 TMEM151AQ8N4L1 468 aa9.3□□□□□ -0.92
TPR-208ENST00000492973 POP1Q99575 1024 aaKnown RBP9.3□□□□□ -0.92
TPR-208ENST00000492973 ZKSCAN3Q9BRR0 538 aa9.3□□□□□ -0.92
TPR-208ENST00000492973 LATS2Q9NRM7 1088 aa9.3□□□□□ -0.92
TPR-208ENST00000492973 MON2Q7Z3U7 1717 aa9.3□□□□□ -0.92
TPR-208ENST00000492973 CGNL1Q0VF96 1302 aa9.3□□□□□ -0.92
TPR-208ENST00000492973 PIK3C2AO00443 1686 aa9.29□□□□□ -0.92
TPR-208ENST00000492973 A0A0A0MRY4 1105 aa9.29□□□□□ -0.92
TPR-208ENST00000492973 SPATA31C1P0DKV0 1188 aa9.29□□□□□ -0.92
TPR-208ENST00000492973 HHIPQ96QV1 700 aa9.29□□□□□ -0.92
TPR-208ENST00000492973 CSRNP1Q96S65 589 aa9.29□□□□□ -0.92
TPR-208ENST00000492973 KIAA0232Q92628 1395 aa9.28□□□□□ -0.92
TPR-208ENST00000492973 SLIT3O75094 1523 aa9.28□□□□□ -0.92
TPR-208ENST00000492973 KRBA1A5PL33 1030 aa9.28□□□□□ -0.92
TPR-208ENST00000492973 FAM83GA6ND36 823 aa9.28□□□□□ -0.92
TPR-208ENST00000492973 FAM229AH3BQW9 127 aa9.28□□□□□ -0.92
TPR-208ENST00000492973 TRPA1O75762 1119 aa9.28□□□□□ -0.92
TPR-208ENST00000492973 FBLN1P23142 703 aa9.28□□□□□ -0.92
TPR-208ENST00000492973 ZC3H6P61129 1189 aaKnown RBP9.28□□□□□ -0.92
TPR-208ENST00000492973 ZSCAN29Q8IWY8 852 aaPredicted RBP9.28□□□□□ -0.92
TPR-208ENST00000492973 DTWD1Q8N5C7 304 aa9.28□□□□□ -0.92
TPR-208ENST00000492973 IL22RA1Q8N6P7 574 aa9.28□□□□□ -0.92
TPR-208ENST00000492973 TMEM102Q8N9M5 508 aaPredicted RBP9.28□□□□□ -0.92
TPR-208ENST00000492973 COG3Q96JB2 828 aa9.28□□□□□ -0.92
TPR-208ENST00000492973 OSMRQ99650 979 aa9.28□□□□□ -0.92
TPR-208ENST00000492973 KNSTRNQ9Y448 316 aa9.28□□□□□ -0.92
TPR-208ENST00000492973 CPDO75976 1380 aa9.27□□□□□ -0.93
TPR-208ENST00000492973 PDE2AO00408 941 aaPredicted RBP9.27□□□□□ -0.93
TPR-208ENST00000492973 TRIM28Q13263 835 aaKnown RBP9.27□□□□□ -0.93
TPR-208ENST00000492973 CHRNA2Q15822 529 aa9.27□□□□□ -0.93
TPR-208ENST00000492973 PRRT3Q5FWE3 981 aa9.27□□□□□ -0.93
TPR-208ENST00000492973 MEX3CQ5U5Q3 659 aaKnown RBP9.27□□□□□ -0.93
TPR-208ENST00000492973 ARHGEF25Q86VW2 580 aa9.27□□□□□ -0.93
TPR-208ENST00000492973 KCNH5Q8NCM2 988 aa9.27□□□□□ -0.93
TPR-208ENST00000492973 C8orf37Q96NL8 207 aa9.27□□□□□ -0.93
TPR-208ENST00000492973 LACRTQ9GZZ8 138 aa9.27□□□□□ -0.93
TPR-208ENST00000492973 ADAM19Q9H013 955 aa9.27□□□□□ -0.93
TPR-208ENST00000492973 GZF1Q9H116 711 aaPredicted RBP9.27□□□□□ -0.93
TPR-208ENST00000492973 NFAT5O94916 1531 aa9.26□□□□□ -0.93
TPR-208ENST00000492973 PTPRAP18433 802 aa9.26□□□□□ -0.93
TPR-208ENST00000492973 RAC1P63000 192 aa9.26□□□□□ -0.93
TPR-208ENST00000492973 PLCB3Q01970 1234 aa9.26□□□□□ -0.93
TPR-208ENST00000492973 FMR1Q06787 632 aaKnown RBP eCLIP9.26□□□□□ -0.938e-7■■□□□ 14.4
TPR-208ENST00000492973 FMR1NBQ8N0W7 255 aaPredicted RBP9.26□□□□□ -0.93
TPR-208ENST00000492973 NXPE3Q969Y0 559 aa9.26□□□□□ -0.93
TPR-208ENST00000492973 BHLHE41Q9C0J9 482 aaPredicted RBP9.26□□□□□ -0.93
TPR-208ENST00000492973 PRDM11Q9NQV5 511 aa9.26□□□□□ -0.93
TPR-208ENST00000492973 RGS17Q9UGC6 210 aaPredicted RBP9.26□□□□□ -0.93
TPR-208ENST00000492973 AFF2P51816 1311 aa9.26□□□□□ -0.93
TPR-208ENST00000492973 NSD2O96028 1365 aa9.25□□□□□ -0.93
TPR-208ENST00000492973 NPC1L1Q9UHC9 1359 aa9.25□□□□□ -0.93
TPR-208ENST00000492973 A0A1W2PP55 124 aa9.25□□□□□ -0.93
TPR-208ENST00000492973 ITGB2P05107 769 aa9.25□□□□□ -0.93
TPR-208ENST00000492973 CDC27P30260 824 aa9.25□□□□□ -0.93
TPR-208ENST00000492973 CC2D1BQ5T0F9 858 aaKnown RBP9.25□□□□□ -0.93
TPR-208ENST00000492973 CCDC74AQ96AQ1 378 aa9.25□□□□□ -0.93
TPR-208ENST00000492973 MUC3BQ9H195 1237 aa9.25□□□□□ -0.93
TPR-208ENST00000492973 MAP3K19Q56UN5 1328 aa9.25□□□□□ -0.93
TPR-208ENST00000492973 CRYBG1Q9Y4K1 1723 aa9.25□□□□□ -0.93
TPR-208ENST00000492973 USP54Q70EL1 1684 aa9.24□□□□□ -0.93
TPR-208ENST00000492973 ZBTB7CA1YPR0 619 aa9.24□□□□□ -0.93
TPR-208ENST00000492973 DEAF1O75398 565 aaPredicted RBP9.24□□□□□ -0.93
TPR-208ENST00000492973 ELNP15502 786 aa9.24□□□□□ -0.93
TPR-208ENST00000492973 ENOX2Q16206 610 aaKnown RBP9.24□□□□□ -0.93
TPR-208ENST00000492973 KIAA0319Q5VV43 1072 aa9.24□□□□□ -0.93
TPR-208ENST00000492973 MORC1Q86VD1 984 aa9.24□□□□□ -0.93
TPR-208ENST00000492973 FBXO11Q86XK2 927 aa9.24□□□□□ -0.93
TPR-208ENST00000492973 NPHS2Q9NP85 383 aa9.24□□□□□ -0.93
TPR-208ENST00000492973 PPME1Q9Y570 386 aa9.24□□□□□ -0.93
TPR-208ENST00000492973 MARF1Q9Y4F3 1742 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms