RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 LRRC37A2A6NM11 1700 aa6.93□□□□□ -1.3
SEC13-219ENST00000492602 PLXNA1Q9UIW2 1896 aa6.92□□□□□ -1.3
SEC13-219ENST00000492602 KIAA0355O15063 1070 aa6.92□□□□□ -1.3
SEC13-219ENST00000492602 GTPBP6O43824 516 aaPredicted RBP6.92□□□□□ -1.3
SEC13-219ENST00000492602 PLIN1O60240 522 aa6.92□□□□□ -1.3
SEC13-219ENST00000492602 PEX10O60683 326 aa6.92□□□□□ -1.3
SEC13-219ENST00000492602 SSTR3P32745 418 aaPredicted RBP6.92□□□□□ -1.3
SEC13-219ENST00000492602 ADCYAP1R1P41586 468 aa6.92□□□□□ -1.3
SEC13-219ENST00000492602 HDLBPQ00341 1268 aaKnown RBP6.92□□□□□ -1.3
SEC13-219ENST00000492602 PABPC4Q13310 644 aaKnown RBP eCLIP6.92□□□□□ -1.32e-9■□□□□ 8.8
SEC13-219ENST00000492602 C1orf53Q5VUE5 145 aa6.92□□□□□ -1.3
SEC13-219ENST00000492602 ANO1Q5XXA6 986 aa6.92□□□□□ -1.3
SEC13-219ENST00000492602 APOBEC3HQ6NTF7 200 aaKnown RBP6.92□□□□□ -1.3
SEC13-219ENST00000492602 CCDC84Q86UT8 332 aaPredicted RBP6.92□□□□□ -1.3
SEC13-219ENST00000492602 TDRD7Q8NHU6 1098 aaKnown RBP6.92□□□□□ -1.3
SEC13-219ENST00000492602 USP6NLQ92738 828 aa6.92□□□□□ -1.3
SEC13-219ENST00000492602 ZDHHC15Q96MV8 337 aa6.92□□□□□ -1.3
SEC13-219ENST00000492602 APBA2Q99767 749 aa6.92□□□□□ -1.3
SEC13-219ENST00000492602 PCGF6Q9BYE7 350 aa6.92□□□□□ -1.3
SEC13-219ENST00000492602 ASCC2Q9H1I8 757 aaPredicted RBP6.92□□□□□ -1.3
SEC13-219ENST00000492602 PHAXQ9H814 394 aaKnown RBP6.92□□□□□ -1.3
SEC13-219ENST00000492602 TMEM39AQ9NV64 488 aa6.92□□□□□ -1.3
SEC13-219ENST00000492602 BABAM1Q9NWV8 329 aa6.92□□□□□ -1.3
SEC13-219ENST00000492602 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.92□□□□□ -1.3
SEC13-219ENST00000492602 ZFHX4Q86UP3 3567 aa6.92□□□□□ -1.3
SEC13-219ENST00000492602 PLXNB2O15031 1838 aa6.92□□□□□ -1.3
SEC13-219ENST00000492602 REV3LO60673 3130 aa6.91□□□□□ -1.3
SEC13-219ENST00000492602 PHF20L1A8MW92 1017 aa6.91□□□□□ -1.3
SEC13-219ENST00000492602 PQBP1O60828 265 aaKnown RBP6.91□□□□□ -1.3
SEC13-219ENST00000492602 HIBADHP31937 336 aaKnown RBP6.91□□□□□ -1.3
SEC13-219ENST00000492602 GYG1P46976 350 aa6.91□□□□□ -1.3
SEC13-219ENST00000492602 CHAF1AQ13111 956 aaPredicted RBP6.91□□□□□ -1.3
SEC13-219ENST00000492602 TMEM240Q5SV17 173 aa6.91□□□□□ -1.3
SEC13-219ENST00000492602 PPP2R2DQ66LE6 453 aa6.91□□□□□ -1.3
SEC13-219ENST00000492602 CCDC174Q6PII3 467 aa6.91□□□□□ -1.3
SEC13-219ENST00000492602 PROCA1Q8NCQ7 364 aaPredicted RBP6.91□□□□□ -1.3
SEC13-219ENST00000492602 SLC44A5Q8NCS7 719 aa6.91□□□□□ -1.3
SEC13-219ENST00000492602 GPRC5AQ8NFJ5 357 aa6.91□□□□□ -1.3
SEC13-219ENST00000492602 METTL22Q9BUU2 404 aaPredicted RBP6.91□□□□□ -1.3
SEC13-219ENST00000492602 CWC22Q9HCG8 908 aaKnown RBP6.91□□□□□ -1.3
SEC13-219ENST00000492602 MORF4L1Q9UBU8 362 aa6.91□□□□□ -1.3
SEC13-219ENST00000492602 TIMELESSQ9UNS1 1208 aa6.91□□□□□ -1.3
SEC13-219ENST00000492602 YBX2Q9Y2T7 364 aaKnown RBP6.91□□□□□ -1.3
SEC13-219ENST00000492602 LRRFIP2Q9Y608 721 aaKnown RBP6.91□□□□□ -1.3
SEC13-219ENST00000492602 MTCH2Q9Y6C9 303 aa6.91□□□□□ -1.3
SEC13-219ENST00000492602 DLG5Q8TDM6 1919 aa6.91□□□□□ -1.3
SEC13-219ENST00000492602 C5orf42Q9H799 3197 aa6.9□□□□□ -1.3
SEC13-219ENST00000492602 FRMPD3Q5JV73 1810 aa6.9□□□□□ -1.3
SEC13-219ENST00000492602 SPTBN4Q9H254 2564 aa6.9□□□□□ -1.3
SEC13-219ENST00000492602 RLFQ13129 1914 aa6.9□□□□□ -1.3
SEC13-219ENST00000492602 RFXAPO00287 272 aa6.9□□□□□ -1.3
SEC13-219ENST00000492602 MAPK4P31152 587 aa6.9□□□□□ -1.3
SEC13-219ENST00000492602 PTPN5P54829 565 aa6.9□□□□□ -1.3
SEC13-219ENST00000492602 NFIAQ12857 509 aa6.9□□□□□ -1.3
SEC13-219ENST00000492602 MORN1Q5T089 497 aa6.9□□□□□ -1.3
SEC13-219ENST00000492602 RASIP1Q5U651 963 aa6.9□□□□□ -1.3
SEC13-219ENST00000492602 HFE2Q6ZVN8 426 aa6.9□□□□□ -1.3
SEC13-219ENST00000492602 C16orf59Q7L2K0 433 aa6.9□□□□□ -1.3
SEC13-219ENST00000492602 GPR142Q7Z601 462 aa6.9□□□□□ -1.3
SEC13-219ENST00000492602 PLEKHH3Q7Z736 793 aa6.9□□□□□ -1.3
SEC13-219ENST00000492602 PRSS33Q8NF86 280 aa6.9□□□□□ -1.3
SEC13-219ENST00000492602 EDC3Q96F86 508 aaKnown RBP6.9□□□□□ -1.3
SEC13-219ENST00000492602 MFSD14AQ96MC6 490 aa6.9□□□□□ -1.3
SEC13-219ENST00000492602 PLEKHF1Q96S99 279 aa6.9□□□□□ -1.3
SEC13-219ENST00000492602 SPINK5Q9NQ38 1064 aaPredicted RBP6.9□□□□□ -1.3
SEC13-219ENST00000492602 FLRT1Q9NZU1 646 aa6.9□□□□□ -1.3
SEC13-219ENST00000492602 IQSEC3Q9UPP2 1182 aaPredicted RBP6.9□□□□□ -1.3
SEC13-219ENST00000492602 LAS1LQ9Y4W2 734 aaKnown RBP6.9□□□□□ -1.3
SEC13-219ENST00000492602 UTYO14607 1347 aa6.9□□□□□ -1.3
SEC13-219ENST00000492602 CHD9Q3L8U1 2897 aa6.9□□□□□ -1.31
SEC13-219ENST00000492602 PRRC2BQ5JSZ5 2229 aaKnown RBP6.89□□□□□ -1.31
SEC13-219ENST00000492602 ANKRD18BA2A2Z9 1011 aa6.89□□□□□ -1.31
SEC13-219ENST00000492602 APBB1O00213 710 aa6.89□□□□□ -1.31
SEC13-219ENST00000492602 DCXO43602 365 aa6.89□□□□□ -1.31
SEC13-219ENST00000492602 FRAT2O75474 233 aaPredicted RBP6.89□□□□□ -1.31
SEC13-219ENST00000492602 TIMP1P01033 207 aa6.89□□□□□ -1.31
SEC13-219ENST00000492602 ACRP10323 421 aa6.89□□□□□ -1.31
SEC13-219ENST00000492602 CYP2C19P33261 490 aa6.89□□□□□ -1.31
SEC13-219ENST00000492602 HMGCS2P54868 508 aa6.89□□□□□ -1.31
SEC13-219ENST00000492602 IRX3P78415 501 aaPredicted RBP6.89□□□□□ -1.31
SEC13-219ENST00000492602 ATP2B2Q01814 1243 aa6.89□□□□□ -1.31
SEC13-219ENST00000492602 SPP2Q13103 211 aa6.89□□□□□ -1.31
SEC13-219ENST00000492602 MAP2K5Q13163 448 aa6.89□□□□□ -1.31
SEC13-219ENST00000492602 PPIGQ13427 754 aaKnown RBP eCLIP6.89□□□□□ -1.31
SEC13-219ENST00000492602 Q3C1V9 767 aa6.89□□□□□ -1.31
SEC13-219ENST00000492602 KRT40Q6A162 431 aa6.89□□□□□ -1.31
SEC13-219ENST00000492602 MFSD5Q6N075 450 aa6.89□□□□□ -1.31
SEC13-219ENST00000492602 ZNF365Q70YC5 407 aa6.89□□□□□ -1.31
SEC13-219ENST00000492602 UBE3BQ7Z3V4 1068 aa6.89□□□□□ -1.31
SEC13-219ENST00000492602 ZFPM1Q8IX07 1006 aa6.89□□□□□ -1.31
SEC13-219ENST00000492602 FAM178BQ8IXR5 827 aa6.89□□□□□ -1.31
SEC13-219ENST00000492602 TRPV1Q8NER1 839 aa6.89□□□□□ -1.31
SEC13-219ENST00000492602 TBC1D22AQ8WUA7 517 aa6.89□□□□□ -1.31
SEC13-219ENST00000492602 COL26A1Q96A83 441 aa6.89□□□□□ -1.31
SEC13-219ENST00000492602 FAM84BQ96KN1 310 aaPredicted RBP6.89□□□□□ -1.31
SEC13-219ENST00000492602 MRIQ9BWK5 157 aa6.89□□□□□ -1.31
SEC13-219ENST00000492602 PORCNQ9H237 461 aa6.89□□□□□ -1.31
SEC13-219ENST00000492602 TXNRD2Q9NNW7 524 aa6.89□□□□□ -1.31
SEC13-219ENST00000492602 NDUFB9Q9Y6M9 179 aa6.89□□□□□ -1.31
SEC13-219ENST00000492602 MAPK8IP3Q9UPT6 1336 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms