RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 GNL3LQ9NVN8 582 aaKnown RBP12.2□□□□□ -0.46
TNFRSF9-203ENST00000492571 RPAP1Q9BWH6 1393 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF9-203ENST00000492571 TRIOBPQ9H2D6 2365 aa12.19□□□□□ -0.46
TNFRSF9-203ENST00000492571 ECM29Q5VYK3 1845 aa12.19□□□□□ -0.46
TNFRSF9-203ENST00000492571 TNPO2O14787 897 aaKnown RBP12.19□□□□□ -0.46
TNFRSF9-203ENST00000492571 ZBTB7BO15156 539 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF9-203ENST00000492571 SLC5A1P13866 664 aa12.19□□□□□ -0.46
TNFRSF9-203ENST00000492571 SMCR8Q8TEV9 937 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF9-203ENST00000492571 ZNF112Q9UJU3 913 aa12.19□□□□□ -0.46
TNFRSF9-203ENST00000492571 CEP290O15078 2479 aa12.18□□□□□ -0.46
TNFRSF9-203ENST00000492571 KIF16BQ96L93 1317 aa12.18□□□□□ -0.46
TNFRSF9-203ENST00000492571 NBPF7P0C2Y1 421 aaPredicted RBP12.18□□□□□ -0.46
TNFRSF9-203ENST00000492571 CYP2C8P10632 490 aa12.18□□□□□ -0.46
TNFRSF9-203ENST00000492571 CTGFP29279 349 aa12.18□□□□□ -0.46
TNFRSF9-203ENST00000492571 LRRC24Q50LG9 513 aa12.18□□□□□ -0.46
TNFRSF9-203ENST00000492571 NOL9Q5SY16 702 aaKnown RBP12.18□□□□□ -0.46
TNFRSF9-203ENST00000492571 UBE2Q1Q7Z7E8 422 aa12.18□□□□□ -0.46
TNFRSF9-203ENST00000492571 ZSCAN29Q8IWY8 852 aaPredicted RBP12.18□□□□□ -0.46
TNFRSF9-203ENST00000492571 PXYLP1Q8TE99 480 aa12.18□□□□□ -0.46
TNFRSF9-203ENST00000492571 COA7Q96BR5 231 aa12.18□□□□□ -0.46
TNFRSF9-203ENST00000492571 DEFB118Q96PH6 123 aa12.18□□□□□ -0.46
TNFRSF9-203ENST00000492571 UNC93B1Q9H1C4 597 aa12.18□□□□□ -0.46
TNFRSF9-203ENST00000492571 BICC1Q9H694 974 aaKnown RBP12.18□□□□□ -0.46
TNFRSF9-203ENST00000492571 USP40Q9NVE5 1235 aa12.18□□□□□ -0.46
TNFRSF9-203ENST00000492571 LRRFIP2Q9Y608 721 aaKnown RBP12.18□□□□□ -0.46
TNFRSF9-203ENST00000492571 ZHX2Q9Y6X8 837 aa12.18□□□□□ -0.46
TNFRSF9-203ENST00000492571 LDHBP07195 334 aaKnown RBP12.17□□□□□ -0.46
TNFRSF9-203ENST00000492571 BCRP11274 1271 aa12.17□□□□□ -0.46
TNFRSF9-203ENST00000492571 FLT3LGP49771 235 aa12.17□□□□□ -0.46
TNFRSF9-203ENST00000492571 CDC42EP5Q6NZY7 148 aa12.17□□□□□ -0.46
TNFRSF9-203ENST00000492571 GADL1Q6ZQY3 521 aa12.17□□□□□ -0.46
TNFRSF9-203ENST00000492571 NECAB2Q7Z6G3 386 aa12.17□□□□□ -0.46
TNFRSF9-203ENST00000492571 LPIN2Q92539 896 aa12.17□□□□□ -0.46
TNFRSF9-203ENST00000492571 SLC45A1Q9Y2W3 748 aa12.17□□□□□ -0.46
TNFRSF9-203ENST00000492571 LAMB1P07942 1786 aa12.17□□□□□ -0.46
TNFRSF9-203ENST00000492571 INHAP05111 366 aa12.16□□□□□ -0.46
TNFRSF9-203ENST00000492571 IRF5Q13568 498 aa12.16□□□□□ -0.46
TNFRSF9-203ENST00000492571 RABL6Q3YEC7 729 aaPredicted RBP12.16□□□□□ -0.46
TNFRSF9-203ENST00000492571 SLF2Q8IX21 1173 aa12.16□□□□□ -0.46
TNFRSF9-203ENST00000492571 SCYL3Q8IZE3 742 aa12.16□□□□□ -0.46
TNFRSF9-203ENST00000492571 PRO3102Q9H379 93 aa12.16□□□□□ -0.46
TNFRSF9-203ENST00000492571 STAP2Q9UGK3 403 aa12.16□□□□□ -0.46
TNFRSF9-203ENST00000492571 PNMA3Q9UL41 463 aa12.16□□□□□ -0.46
TNFRSF9-203ENST00000492571 GABRQQ9UN88 632 aa12.16□□□□□ -0.46
TNFRSF9-203ENST00000492571 SZT2Q5T011 3432 aa12.15□□□□□ -0.46
TNFRSF9-203ENST00000492571 UTYO14607 1347 aa12.15□□□□□ -0.46
TNFRSF9-203ENST00000492571 ADGRA2Q96PE1 1338 aa12.15□□□□□ -0.46
TNFRSF9-203ENST00000492571 A0A0G2JLL6 359 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF9-203ENST00000492571 ELNP15502 786 aa12.15□□□□□ -0.46
TNFRSF9-203ENST00000492571 GPAT2Q6NUI2 795 aa12.15□□□□□ -0.46
TNFRSF9-203ENST00000492571 PRRT2Q7Z6L0 340 aaPredicted RBP12.15□□□□□ -0.46
TNFRSF9-203ENST00000492571 ZGPATQ8N5A5 531 aaKnown RBP12.15□□□□□ -0.46
TNFRSF9-203ENST00000492571 VGLL2Q8N8G2 317 aa12.15□□□□□ -0.46
TNFRSF9-203ENST00000492571 KAZALD1Q96I82 304 aa12.15□□□□□ -0.46
TNFRSF9-203ENST00000492571 MRS2Q9HD23 443 aa12.15□□□□□ -0.46
TNFRSF9-203ENST00000492571 DAGLAQ9Y4D2 1042 aa12.15□□□□□ -0.46
TNFRSF9-203ENST00000492571 RANBP2P49792 3224 aaKnown RBP12.15□□□□□ -0.47
TNFRSF9-203ENST00000492571 ENTPD3O75355 529 aa12.14□□□□□ -0.47
TNFRSF9-203ENST00000492571 PTPRAP18433 802 aa12.14□□□□□ -0.47
TNFRSF9-203ENST00000492571 NFIAQ12857 509 aa12.14□□□□□ -0.47
TNFRSF9-203ENST00000492571 MOGSQ13724 837 aa12.14□□□□□ -0.47
TNFRSF9-203ENST00000492571 DIXDC1Q155Q3 683 aa12.14□□□□□ -0.47
TNFRSF9-203ENST00000492571 PAWRQ96IZ0 340 aaKnown RBP12.14□□□□□ -0.47
TNFRSF9-203ENST00000492571 OTOFQ9HC10 1997 aa12.13□□□□□ -0.47
TNFRSF9-203ENST00000492571 EYA2O00167 538 aa12.13□□□□□ -0.47
TNFRSF9-203ENST00000492571 SEMA3EO15041 775 aa12.13□□□□□ -0.47
TNFRSF9-203ENST00000492571 CTNND1O60716 968 aaKnown RBP12.13□□□□□ -0.47
TNFRSF9-203ENST00000492571 FGFR2P21802 821 aa12.13□□□□□ -0.47
TNFRSF9-203ENST00000492571 PABPC4Q13310 644 aaKnown RBP eCLIP12.13□□□□□ -0.47
TNFRSF9-203ENST00000492571 ANKLE1Q8NAG6 615 aa12.13□□□□□ -0.47
TNFRSF9-203ENST00000492571 KLHDC4Q8TBB5 520 aa12.13□□□□□ -0.47
TNFRSF9-203ENST00000492571 CEP126Q9P2H0 1117 aa12.13□□□□□ -0.47
TNFRSF9-203ENST00000492571 FAM198AQ9UFP1 575 aa12.13□□□□□ -0.47
TNFRSF9-203ENST00000492571 DENND2AQ9ULE3 1009 aa12.13□□□□□ -0.47
TNFRSF9-203ENST00000492571 VPS9D1Q9Y2B5 631 aa12.13□□□□□ -0.47
TNFRSF9-203ENST00000492571 AFG3L2Q9Y4W6 797 aa12.13□□□□□ -0.47
TNFRSF9-203ENST00000492571 TRIM75PA6NK02 468 aa12.12□□□□□ -0.47
TNFRSF9-203ENST00000492571 PRDX5P30044 214 aa12.12□□□□□ -0.47
TNFRSF9-203ENST00000492571 BMP8BP34820 402 aa12.12□□□□□ -0.47
TNFRSF9-203ENST00000492571 DZIP1Q86YF9 867 aaKnown RBP12.12□□□□□ -0.47
TNFRSF9-203ENST00000492571 ANKRD13CQ8N6S4 541 aa12.12□□□□□ -0.47
TNFRSF9-203ENST00000492571 ANKRD44Q8N8A2 993 aa12.12□□□□□ -0.47
TNFRSF9-203ENST00000492571 LRCH3Q96II8 777 aa12.12□□□□□ -0.47
TNFRSF9-203ENST00000492571 NBPF3Q9H094 633 aa12.12□□□□□ -0.47
TNFRSF9-203ENST00000492571 HMX1Q9NP08 348 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF9-203ENST00000492571 PAK6Q9NQU5 681 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF9-203ENST00000492571 AGTPBP1Q9UPW5 1226 aa12.12□□□□□ -0.47
TNFRSF9-203ENST00000492571 HDAC5Q9UQL6 1122 aa12.12□□□□□ -0.47
TNFRSF9-203ENST00000492571 PTPRCP08575 1304 aa12.11□□□□□ -0.47
TNFRSF9-203ENST00000492571 A0A0C4DFX4 3053 aa12.11□□□□□ -0.47
TNFRSF9-203ENST00000492571 PHF20L1A8MW92 1017 aa12.11□□□□□ -0.47
TNFRSF9-203ENST00000492571 GCLCP48506 637 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF9-203ENST00000492571 RGS3P49796 1198 aa12.11□□□□□ -0.47
TNFRSF9-203ENST00000492571 ATP2B3Q16720 1220 aa12.11□□□□□ -0.47
TNFRSF9-203ENST00000492571 CCDC184Q52MB2 194 aa12.11□□□□□ -0.47
TNFRSF9-203ENST00000492571 SPTY2D1Q68D10 685 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF9-203ENST00000492571 C7orf61Q8IZ16 206 aa12.11□□□□□ -0.47
TNFRSF9-203ENST00000492571 DEFB123Q8N688 67 aa12.11□□□□□ -0.47
TNFRSF9-203ENST00000492571 IDI2Q9BXS1 227 aa12.11□□□□□ -0.47
TNFRSF9-203ENST00000492571 ADAM33Q9BZ11 813 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms