RNA–Protein interactions for RNA: ENST00000492536.5

RUSC1-215, Transcript of RUN and SH3 domain containing 1, human

TSL 3

Gene RUSC1, Length 1,069 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUSC1-215	ENST00000492536	PIH1D3	Q9NQM4	214 aa	Known RBP	28.84	■■■□□ 2.21
RUSC1-215	ENST00000492536	DDX19B	Q9UMR2	479 aa		28.84	■■■□□ 2.21
RUSC1-215	ENST00000492536	BRCA2	P51587	3418 aa		28.83	■■■□□ 2.21
RUSC1-215	ENST00000492536	FAM196B	A6NMK8	535 aa		28.83	■■■□□ 2.21
RUSC1-215	ENST00000492536	BCR	P11274	1271 aa		28.83	■■■□□ 2.21
RUSC1-215	ENST00000492536	PSMC4	P43686	418 aa		28.83	■■■□□ 2.21
RUSC1-215	ENST00000492536	ADGRA1	Q86SQ6	560 aa		28.83	■■■□□ 2.21
RUSC1-215	ENST00000492536	CERS3	Q8IU89	383 aa		28.83	■■■□□ 2.21
RUSC1-215	ENST00000492536	PHIP	Q8WWQ0	1821 aa		28.83	■■■□□ 2.21
RUSC1-215	ENST00000492536	CYP2C8	P10632	490 aa		28.82	■■■□□ 2.2
RUSC1-215	ENST00000492536	CAP2	P40123	477 aa		28.82	■■■□□ 2.2
RUSC1-215	ENST00000492536	PRPF38B	Q5VTL8	546 aa	Known RBP	28.82	■■■□□ 2.2
RUSC1-215	ENST00000492536	AACS	Q86V21	672 aa		28.82	■■■□□ 2.2
RUSC1-215	ENST00000492536	RPAP2	Q8IXW5	612 aa	Predicted RBP	28.82	■■■□□ 2.2
RUSC1-215	ENST00000492536	TGFBRAP1	Q8WUH2	860 aa		28.82	■■■□□ 2.2
RUSC1-215	ENST00000492536	TRIM47	Q96LD4	638 aa		28.82	■■■□□ 2.2
RUSC1-215	ENST00000492536	CHMP4B	Q9H444	224 aa	Known RBP	28.82	■■■□□ 2.2
RUSC1-215	ENST00000492536	SRRD	Q9UH36	339 aa		28.82	■■■□□ 2.2
RUSC1-215	ENST00000492536	KIAA0100	Q14667	2235 aa	Known RBP	28.82	■■■□□ 2.2
RUSC1-215	ENST00000492536	PTPRF	P10586	1907 aa		28.81	■■■□□ 2.2
RUSC1-215	ENST00000492536	FLT1	P17948	1338 aa		28.81	■■■□□ 2.2
RUSC1-215	ENST00000492536	HMMR	O75330	724 aa		28.81	■■■□□ 2.2
RUSC1-215	ENST00000492536	AGTPBP1	Q9UPW5	1226 aa		28.81	■■■□□ 2.2
RUSC1-215	ENST00000492536	ZSWIM8	A7E2V4	1837 aa		28.8	■■■□□ 2.2
RUSC1-215	ENST00000492536	IDH1	O75874	414 aa	Known RBP	28.8	■■■□□ 2.2
RUSC1-215	ENST00000492536	FMNL1	O95466	1100 aa	Predicted RBP	28.8	■■■□□ 2.2
RUSC1-215	ENST00000492536	PROCA1	Q8NCQ7	364 aa	Predicted RBP	28.8	■■■□□ 2.2
RUSC1-215	ENST00000492536	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	28.8	■■■□□ 2.2
RUSC1-215	ENST00000492536	CYP7A1	P22680	504 aa		28.79	■■■□□ 2.2
RUSC1-215	ENST00000492536	CTGF	P29279	349 aa		28.79	■■■□□ 2.2
RUSC1-215	ENST00000492536	FCGRT	P55899	365 aa		28.79	■■■□□ 2.2
RUSC1-215	ENST00000492536	MAPKAPK5	Q8IW41	473 aa		28.79	■■■□□ 2.2
RUSC1-215	ENST00000492536	ZNF280C	Q8ND82	737 aa		28.79	■■■□□ 2.2
RUSC1-215	ENST00000492536	RHPN1	Q8TCX5	695 aa		28.79	■■■□□ 2.2
RUSC1-215	ENST00000492536	SMCR8	Q8TEV9	937 aa	Predicted RBP	28.79	■■■□□ 2.2
RUSC1-215	ENST00000492536	ZBTB40	Q9NUA8	1239 aa		28.79	■■■□□ 2.2
RUSC1-215	ENST00000492536	OSBP	P22059	807 aa		28.78	■■■□□ 2.2
RUSC1-215	ENST00000492536	CCDC84	Q86UT8	332 aa	Predicted RBP	28.78	■■■□□ 2.2
RUSC1-215	ENST00000492536	METTL16	Q86W50	562 aa	Known RBP	28.78	■■■□□ 2.2
RUSC1-215	ENST00000492536	FOXP4	Q8IVH2	680 aa	Predicted RBP	28.78	■■■□□ 2.2
RUSC1-215	ENST00000492536	KIF1BP	Q96EK5	621 aa		28.78	■■■□□ 2.2
RUSC1-215	ENST00000492536	RCAN3	Q9UKA8	241 aa		28.78	■■■□□ 2.2
RUSC1-215	ENST00000492536	PNMA3	Q9UL41	463 aa		28.78	■■■□□ 2.2
RUSC1-215	ENST00000492536	COG6	Q9Y2V7	657 aa		28.78	■■■□□ 2.2
RUSC1-215	ENST00000492536	MKI67	P46013	3256 aa	Known RBP	28.78	■■■□□ 2.2
RUSC1-215	ENST00000492536	USP17L5	A8MUK1	530 aa		28.77	■■■□□ 2.2
RUSC1-215	ENST00000492536	MAP3K12	Q12852	859 aa		28.77	■■■□□ 2.2
RUSC1-215	ENST00000492536	SPP2	Q13103	211 aa		28.77	■■■□□ 2.2
RUSC1-215	ENST00000492536	SLC4A8	Q2Y0W8	1093 aa		28.77	■■■□□ 2.2
RUSC1-215	ENST00000492536	CLASRP	Q8N2M8	674 aa	Known RBP	28.77	■■■□□ 2.2
RUSC1-215	ENST00000492536	SH3TC2	Q8TF17	1288 aa		28.77	■■■□□ 2.2
RUSC1-215	ENST00000492536	AS3MT	Q9HBK9	375 aa		28.77	■■■□□ 2.2
RUSC1-215	ENST00000492536	FOCAD	Q5VW36	1801 aa		28.77	■■■□□ 2.2
RUSC1-215	ENST00000492536	MYPN	Q86TC9	1320 aa		28.76	■■■□□ 2.19
RUSC1-215	ENST00000492536	ASNS	P08243	561 aa		28.76	■■■□□ 2.19
RUSC1-215	ENST00000492536	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	28.76	■■■□□ 2.19
RUSC1-215	ENST00000492536	RAET1E	Q8TD07	263 aa		28.76	■■■□□ 2.19
RUSC1-215	ENST00000492536	TRIM34	Q9BYJ4	488 aa		28.76	■■■□□ 2.19
RUSC1-215	ENST00000492536	IL1RAPL2	Q9NP60	686 aa		28.76	■■■□□ 2.19
RUSC1-215	ENST00000492536	GINM1	Q9NU53	330 aa		28.76	■■■□□ 2.19
RUSC1-215	ENST00000492536	MYO5A	Q9Y4I1	1855 aa	Known RBP	28.76	■■■□□ 2.19
RUSC1-215	ENST00000492536	ECM2	O94769	699 aa	Predicted RBP	28.75	■■■□□ 2.19
RUSC1-215	ENST00000492536	HLA-DOA	P06340	250 aa		28.75	■■■□□ 2.19
RUSC1-215	ENST00000492536	EN2	P19622	333 aa	Predicted RBP	28.75	■■■□□ 2.19
RUSC1-215	ENST00000492536	RRP1B	Q14684	758 aa	Known RBP	28.75	■■■□□ 2.19
RUSC1-215	ENST00000492536	MAGEB6	Q8N7X4	407 aa		28.75	■■■□□ 2.19
RUSC1-215	ENST00000492536	ATAD5	Q96QE3	1844 aa		28.75	■■■□□ 2.19
RUSC1-215	ENST00000492536	CDK5RAP2	Q96SN8	1893 aa		28.74	■■■□□ 2.19
RUSC1-215	ENST00000492536	SIPA1L1	O43166	1804 aa		28.74	■■■□□ 2.19
RUSC1-215	ENST00000492536	PABPC4	Q13310	644 aa	Known RBP eCLIP	28.74	■■■□□ 2.19
RUSC1-215	ENST00000492536	TTF1	Q15361	905 aa	Predicted RBP	28.74	■■■□□ 2.19
RUSC1-215	ENST00000492536	PALD1	Q9ULE6	856 aa		28.74	■■■□□ 2.19
RUSC1-215	ENST00000492536	DYNLL1	P63167	89 aa	Known RBP	28.73	■■■□□ 2.19
RUSC1-215	ENST00000492536	SH3D19	Q5HYK7	790 aa		28.73	■■■□□ 2.19
RUSC1-215	ENST00000492536	TREML2	Q5T2D2	321 aa		28.73	■■■□□ 2.19
RUSC1-215	ENST00000492536	WDR18	Q9BV38	432 aa		28.73	■■■□□ 2.19
RUSC1-215	ENST00000492536	ANTXR1	Q9H6X2	564 aa		28.73	■■■□□ 2.19
RUSC1-215	ENST00000492536	DNAJC18	Q9H819	358 aa		28.73	■■■□□ 2.19
RUSC1-215	ENST00000492536	LOC285556	D6RIA3	1793 aa		28.73	■■■□□ 2.19
RUSC1-215	ENST00000492536	RAB11FIP3	O75154	756 aa		28.72	■■■□□ 2.19
RUSC1-215	ENST00000492536	GRK4	P32298	578 aa		28.72	■■■□□ 2.19
RUSC1-215	ENST00000492536	HMGCS2	P54868	508 aa		28.72	■■■□□ 2.19
RUSC1-215	ENST00000492536	SIRT2	Q8IXJ6	389 aa		28.72	■■■□□ 2.19
RUSC1-215	ENST00000492536	MIGA1	Q8NAN2	632 aa		28.72	■■■□□ 2.19
RUSC1-215	ENST00000492536	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	28.72	■■■□□ 2.19
RUSC1-215	ENST00000492536	NDUFB9	Q9Y6M9	179 aa		28.72	■■■□□ 2.19
RUSC1-215	ENST00000492536	USP5	P45974	858 aa		28.71	■■■□□ 2.19
RUSC1-215	ENST00000492536	PRKCZ	Q05513	592 aa		28.71	■■■□□ 2.19
RUSC1-215	ENST00000492536	IFIT2	P09913	472 aa	Known RBP	28.7	■■■□□ 2.18
RUSC1-215	ENST00000492536	GCLC	P48506	637 aa	Predicted RBP	28.7	■■■□□ 2.18
RUSC1-215	ENST00000492536	FAM110C	Q1W6H9	321 aa		28.7	■■■□□ 2.18
RUSC1-215	ENST00000492536	SAP30BP	Q9UHR5	308 aa	Known RBP	28.7	■■■□□ 2.18
RUSC1-215	ENST00000492536	MYC	P01106	439 aa	Predicted RBP	28.69	■■■□□ 2.18
RUSC1-215	ENST00000492536	PDE3A	Q14432	1141 aa		28.69	■■■□□ 2.18
RUSC1-215	ENST00000492536	SLAIN1	Q8ND83	568 aa		28.69	■■■□□ 2.18
RUSC1-215	ENST00000492536	MGAM	O43451	1857 aa		28.68	■■■□□ 2.18
RUSC1-215	ENST00000492536	APBB1	O00213	710 aa		28.68	■■■□□ 2.18
RUSC1-215	ENST00000492536	TNPO2	O14787	897 aa	Known RBP	28.68	■■■□□ 2.18
RUSC1-215	ENST00000492536	SLC34A2	O95436	690 aa		28.68	■■■□□ 2.18
RUSC1-215	ENST00000492536	BACE1	P56817	501 aa		28.68	■■■□□ 2.18

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms