RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 KDM7AQ6ZMT4 941 aa10.96□□□□□ -0.66
VPS8-225ENST00000492449 C14orf37Q86TY3 774 aa10.96□□□□□ -0.66
VPS8-225ENST00000492449 CEP57Q86XR8 500 aa10.96□□□□□ -0.66
VPS8-225ENST00000492449 PDILTQ8N807 584 aa10.96□□□□□ -0.66
VPS8-225ENST00000492449 ZNF473Q8WTR7 871 aaKnown RBP10.96□□□□□ -0.66
VPS8-225ENST00000492449 SPDL1Q96EA4 605 aa10.96□□□□□ -0.66
VPS8-225ENST00000492449 USP44Q9H0E7 712 aa10.96□□□□□ -0.66
VPS8-225ENST00000492449 IRAK4Q9NWZ3 460 aa10.96□□□□□ -0.66
VPS8-225ENST00000492449 FAM184BQ9ULE4 1060 aa10.96□□□□□ -0.66
VPS8-225ENST00000492449 ZBTB12Q9Y330 459 aaPredicted RBP10.96□□□□□ -0.66
VPS8-225ENST00000492449 FAM237AA0A1B0GTK4 181 aa10.95□□□□□ -0.66
VPS8-225ENST00000492449 AHCYL1O43865 530 aa10.95□□□□□ -0.66
VPS8-225ENST00000492449 SURF6O75683 361 aaKnown RBP10.95□□□□□ -0.66
VPS8-225ENST00000492449 GBP2P32456 591 aaPredicted RBP10.95□□□□□ -0.66
VPS8-225ENST00000492449 XRCC4Q13426 336 aa10.95□□□□□ -0.66
VPS8-225ENST00000492449 ALS2CLQ60I27 953 aa10.95□□□□□ -0.66
VPS8-225ENST00000492449 ELOA2Q8IYF1 753 aaPredicted RBP10.95□□□□□ -0.66
VPS8-225ENST00000492449 THOC1Q96FV9 657 aaKnown RBP10.95□□□□□ -0.66
VPS8-225ENST00000492449 NR1I3Q14994 352 aa10.95□□□□□ -0.66
VPS8-225ENST00000492449 OLFM4Q6UX06 510 aa10.95□□□□□ -0.66
VPS8-225ENST00000492449 CRELD2Q6UXH1 353 aaPredicted RBP10.95□□□□□ -0.66
VPS8-225ENST00000492449 CCDC51Q96ER9 411 aa10.95□□□□□ -0.66
VPS8-225ENST00000492449 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.95□□□□□ -0.66
VPS8-225ENST00000492449 H7C1W4 665 aa10.95□□□□□ -0.66
VPS8-225ENST00000492449 SMNDC1O75940 238 aaKnown RBP eCLIP10.95□□□□□ -0.66
VPS8-225ENST00000492449 CTDNEP1O95476 244 aa10.95□□□□□ -0.66
VPS8-225ENST00000492449 AKAP17AQ02040 695 aaKnown RBP10.95□□□□□ -0.66
VPS8-225ENST00000492449 PDIA5Q14554 519 aa10.95□□□□□ -0.66
VPS8-225ENST00000492449 MIS18BP1Q6P0N0 1132 aa10.95□□□□□ -0.66
VPS8-225ENST00000492449 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.95□□□□□ -0.66
VPS8-225ENST00000492449 TCEANC2Q96MN5 208 aa10.95□□□□□ -0.66
VPS8-225ENST00000492449 STK31Q9BXU1 1019 aa10.95□□□□□ -0.66
VPS8-225ENST00000492449 ECHDC1Q9NTX5 307 aa10.95□□□□□ -0.66
VPS8-225ENST00000492449 CORO1CQ9ULV4 474 aaPredicted RBP10.95□□□□□ -0.66
VPS8-225ENST00000492449 MYH8P13535 1937 aa10.95□□□□□ -0.66
VPS8-225ENST00000492449 ERICH2A1L162 156 aa10.94□□□□□ -0.66
VPS8-225ENST00000492449 UBTFL1P0CB47 393 aaPredicted RBP10.94□□□□□ -0.66
VPS8-225ENST00000492449 RBM5P52756 815 aaKnown RBP eCLIP10.94□□□□□ -0.66
VPS8-225ENST00000492449 MTA1Q13330 715 aa10.94□□□□□ -0.66
VPS8-225ENST00000492449 LACTB2Q53H82 288 aaPredicted RBP10.94□□□□□ -0.66
VPS8-225ENST00000492449 PPP1R42Q7Z4L9 355 aa10.94□□□□□ -0.66
VPS8-225ENST00000492449 C1orf131Q8NDD1 294 aaKnown RBP10.94□□□□□ -0.66
VPS8-225ENST00000492449 CCDC47Q96A33 483 aaKnown RBP10.94□□□□□ -0.66
VPS8-225ENST00000492449 SLC39A2Q9NP94 309 aa10.94□□□□□ -0.66
VPS8-225ENST00000492449 HPSEQ9Y251 543 aa10.94□□□□□ -0.66
VPS8-225ENST00000492449 TSPOAP1O95153 1857 aa10.94□□□□□ -0.66
VPS8-225ENST00000492449 TULP1O00294 542 aaPredicted RBP10.94□□□□□ -0.66
VPS8-225ENST00000492449 PSMD14O00487 310 aa10.94□□□□□ -0.66
VPS8-225ENST00000492449 RTN3O95197 1032 aaPredicted RBP10.94□□□□□ -0.66
VPS8-225ENST00000492449 TFRCP02786 760 aaKnown RBP10.94□□□□□ -0.66
VPS8-225ENST00000492449 PFKFB1P16118 471 aa10.94□□□□□ -0.66
VPS8-225ENST00000492449 LSP1P33241 339 aa10.94□□□□□ -0.66
VPS8-225ENST00000492449 CKAP4Q07065 602 aaKnown RBP10.94□□□□□ -0.66
VPS8-225ENST00000492449 FLIIQ13045 1269 aa10.94□□□□□ -0.66
VPS8-225ENST00000492449 NMIQ13287 307 aaPredicted RBP10.94□□□□□ -0.66
VPS8-225ENST00000492449 TTMPQ5BVD1 217 aa10.94□□□□□ -0.66
VPS8-225ENST00000492449 RASSF8Q8NHQ8 419 aa10.94□□□□□ -0.66
VPS8-225ENST00000492449 P3H4Q92791 437 aa10.94□□□□□ -0.66
VPS8-225ENST00000492449 NCAPD2Q15021 1401 aa10.94□□□□□ -0.66
VPS8-225ENST00000492449 A0A0U1RQJ8 604 aa10.93□□□□□ -0.66
VPS8-225ENST00000492449 A0A1B0GTH6 734 aa10.93□□□□□ -0.66
VPS8-225ENST00000492449 FRMD3A2A2Y4 597 aa10.93□□□□□ -0.66
VPS8-225ENST00000492449 SPTLC2O15270 562 aa10.93□□□□□ -0.66
VPS8-225ENST00000492449 KCNB1Q14721 858 aa10.93□□□□□ -0.66
VPS8-225ENST00000492449 PTGISQ16647 500 aa10.93□□□□□ -0.66
VPS8-225ENST00000492449 NCAPH2Q6IBW4 605 aa10.93□□□□□ -0.66
VPS8-225ENST00000492449 MFN1Q8IWA4 741 aa10.93□□□□□ -0.66
VPS8-225ENST00000492449 SPDYE1Q8NFV5 336 aaPredicted RBP10.93□□□□□ -0.66
VPS8-225ENST00000492449 ATRIPQ8WXE1 791 aa10.93□□□□□ -0.66
VPS8-225ENST00000492449 GPATCH3Q96I76 525 aa10.93□□□□□ -0.66
VPS8-225ENST00000492449 TRPC6Q9Y210 931 aa10.93□□□□□ -0.66
VPS8-225ENST00000492449 TAF6LQ9Y6J9 622 aa10.93□□□□□ -0.66
VPS8-225ENST00000492449 PTPDC1A2A3K4 754 aa10.93□□□□□ -0.66
VPS8-225ENST00000492449 SKAP2O75563 359 aaPredicted RBP10.93□□□□□ -0.66
VPS8-225ENST00000492449 FAM107AO95990 144 aa10.93□□□□□ -0.66
VPS8-225ENST00000492449 ARID4AP29374 1257 aaPredicted RBP10.93□□□□□ -0.66
VPS8-225ENST00000492449 PDCLQ13371 301 aa10.93□□□□□ -0.66
VPS8-225ENST00000492449 CAPRIN2Q6IMN6 1127 aaKnown RBP10.93□□□□□ -0.66
VPS8-225ENST00000492449 Q6ZUG5 572 aa10.93□□□□□ -0.66
VPS8-225ENST00000492449 BZW1Q7L1Q6 419 aaKnown RBP10.93□□□□□ -0.66
VPS8-225ENST00000492449 ANKRD23Q86SG2 305 aa10.93□□□□□ -0.66
VPS8-225ENST00000492449 ACSBG1Q96GR2 724 aa10.93□□□□□ -0.66
VPS8-225ENST00000492449 OSBPL9Q96SU4 736 aa10.93□□□□□ -0.66
VPS8-225ENST00000492449 CDC5LQ99459 802 aaKnown RBP10.93□□□□□ -0.66
VPS8-225ENST00000492449 PPFIA3O75145 1194 aa10.92□□□□□ -0.66
VPS8-225ENST00000492449 DNAJC8O75937 253 aaPredicted RBP10.92□□□□□ -0.66
VPS8-225ENST00000492449 PBX1P40424 430 aa10.92□□□□□ -0.66
VPS8-225ENST00000492449 STK38Q15208 465 aa10.92□□□□□ -0.66
VPS8-225ENST00000492449 PAPD7Q5XG87 772 aaKnown RBP10.92□□□□□ -0.66
VPS8-225ENST00000492449 MYCBPAPQ8TBZ2 947 aa10.92□□□□□ -0.66
VPS8-225ENST00000492449 ENOX1Q8TC92 643 aaKnown RBP10.92□□□□□ -0.66
VPS8-225ENST00000492449 ZBTB10Q96DT7 871 aa10.92□□□□□ -0.66
VPS8-225ENST00000492449 CCDC114Q96M63 670 aa10.92□□□□□ -0.66
VPS8-225ENST00000492449 NEK1Q96PY6 1258 aa10.92□□□□□ -0.66
VPS8-225ENST00000492449 CENPHQ9H3R5 247 aa10.92□□□□□ -0.66
VPS8-225ENST00000492449 MON2Q7Z3U7 1717 aa10.92□□□□□ -0.66
VPS8-225ENST00000492449 MAP3K15Q6ZN16 1313 aa10.92□□□□□ -0.66
VPS8-225ENST00000492449 APBA1Q02410 837 aa10.92□□□□□ -0.66
VPS8-225ENST00000492449 MKRN4PQ13434 485 aaPredicted RBP10.92□□□□□ -0.66
VPS8-225ENST00000492449 RNF187Q5TA31 235 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms