RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 CYP2D6P10635 497 aa14.39□□□□□ -0.11
HMGN1-220ENST00000492280 ZNF827Q17R98 1081 aa14.39□□□□□ -0.11
HMGN1-220ENST00000492280 UBAC1Q9BSL1 405 aa14.39□□□□□ -0.11
HMGN1-220ENST00000492280 ZNF652Q9Y2D9 606 aa14.39□□□□□ -0.11
HMGN1-220ENST00000492280 RIOK3O14730 519 aaKnown RBP14.39□□□□□ -0.11
HMGN1-220ENST00000492280 PLEKHA8P1O95397 391 aa14.39□□□□□ -0.11
HMGN1-220ENST00000492280 TOB1P50616 345 aaPredicted RBP14.39□□□□□ -0.11
HMGN1-220ENST00000492280 FAM47AQ5JRC9 791 aa14.39□□□□□ -0.11
HMGN1-220ENST00000492280 USP49Q70CQ1 688 aa14.39□□□□□ -0.11
HMGN1-220ENST00000492280 ZNF592Q92610 1267 aa14.39□□□□□ -0.11
HMGN1-220ENST00000492280 MTMR7Q9Y216 660 aa14.39□□□□□ -0.11
HMGN1-220ENST00000492280 PCDHB6Q9Y5E3 794 aa14.39□□□□□ -0.11
HMGN1-220ENST00000492280 CACNA1SQ13698 1873 aa14.38□□□□□ -0.11
HMGN1-220ENST00000492280 LIFRP42702 1097 aa14.38□□□□□ -0.11
HMGN1-220ENST00000492280 GOLGA8FQ08AF8 430 aa14.38□□□□□ -0.11
HMGN1-220ENST00000492280 GOLGA8DPQ0D2H9 430 aa14.38□□□□□ -0.11
HMGN1-220ENST00000492280 LONRF3Q496Y0 759 aa14.38□□□□□ -0.11
HMGN1-220ENST00000492280 EARS2Q5JPH6 523 aaKnown RBP14.38□□□□□ -0.11
HMGN1-220ENST00000492280 AK7Q96M32 723 aa14.38□□□□□ -0.11
HMGN1-220ENST00000492280 RIOK1Q9BRS2 568 aaKnown RBP14.38□□□□□ -0.11
HMGN1-220ENST00000492280 KRT23Q9C075 422 aa14.38□□□□□ -0.11
HMGN1-220ENST00000492280 IFNKQ9P0W0 207 aa14.38□□□□□ -0.11
HMGN1-220ENST00000492280 ERICH2A1L162 156 aa14.38□□□□□ -0.11
HMGN1-220ENST00000492280 WNT7AO00755 349 aa14.38□□□□□ -0.11
HMGN1-220ENST00000492280 NPHP1O15259 732 aa14.38□□□□□ -0.11
HMGN1-220ENST00000492280 FMNL1O95466 1100 aaPredicted RBP14.38□□□□□ -0.11
HMGN1-220ENST00000492280 NBPF11Q86T75 865 aa14.38□□□□□ -0.11
HMGN1-220ENST00000492280 MYRIPQ8NFW9 859 aa14.38□□□□□ -0.11
HMGN1-220ENST00000492280 XPO4Q9C0E2 1151 aaKnown RBP14.38□□□□□ -0.11
HMGN1-220ENST00000492280 PNPLA7Q6ZV29 1317 aa14.38□□□□□ -0.11
HMGN1-220ENST00000492280 CMA1P23946 247 aa14.37□□□□□ -0.11
HMGN1-220ENST00000492280 NBPF5PQ86XG9 351 aaPredicted RBP14.37□□□□□ -0.11
HMGN1-220ENST00000492280 ENAHQ8N8S7 591 aaPredicted RBP14.37□□□□□ -0.11
HMGN1-220ENST00000492280 CNNM2Q9H8M5 875 aa14.37□□□□□ -0.11
HMGN1-220ENST00000492280 UTRNP46939 3433 aa14.37□□□□□ -0.11
HMGN1-220ENST00000492280 TOM1O60784 492 aa14.37□□□□□ -0.11
HMGN1-220ENST00000492280 METTL16Q86W50 562 aaKnown RBP14.37□□□□□ -0.11
HMGN1-220ENST00000492280 FOXP4Q8IVH2 680 aaPredicted RBP14.37□□□□□ -0.11
HMGN1-220ENST00000492280 NOSTRINQ8IVI9 506 aa14.37□□□□□ -0.11
HMGN1-220ENST00000492280 LRRC8AQ8IWT6 810 aa14.37□□□□□ -0.11
HMGN1-220ENST00000492280 A0A1B0GUL6 1792 aa14.37□□□□□ -0.11
HMGN1-220ENST00000492280 ZNF804BA4D1E1 1349 aa14.37□□□□□ -0.11
HMGN1-220ENST00000492280 COL5A3P25940 1745 aaPredicted RBP14.37□□□□□ -0.11
HMGN1-220ENST00000492280 USP17L12C9JPN9 530 aa14.36□□□□□ -0.11
HMGN1-220ENST00000492280 USP17L21D6R901 530 aa14.36□□□□□ -0.11
HMGN1-220ENST00000492280 UBAP1LF5GYI3 381 aa14.36□□□□□ -0.11
HMGN1-220ENST00000492280 RRP9O43818 475 aaKnown RBP14.36□□□□□ -0.11
HMGN1-220ENST00000492280 MMP1P03956 469 aa14.36□□□□□ -0.11
HMGN1-220ENST00000492280 IFNAR1P17181 557 aa14.36□□□□□ -0.11
HMGN1-220ENST00000492280 U2AF2P26368 475 aaKnown RBP eCLIP14.36□□□□□ -0.118e-8■■■■■ 35
HMGN1-220ENST00000492280 NAA30Q147X3 362 aaPredicted RBP14.36□□□□□ -0.11
HMGN1-220ENST00000492280 SART3Q15020 963 aaKnown RBP14.36□□□□□ -0.11
HMGN1-220ENST00000492280 TMC6Q7Z403 805 aa14.36□□□□□ -0.11
HMGN1-220ENST00000492280 ZNF710Q8N1W2 664 aa14.36□□□□□ -0.11
HMGN1-220ENST00000492280 FANCBQ8NB91 859 aa14.36□□□□□ -0.11
HMGN1-220ENST00000492280 CABP5Q9NP86 173 aa14.36□□□□□ -0.11
HMGN1-220ENST00000492280 TIAM2Q8IVF5 1701 aa14.36□□□□□ -0.11
HMGN1-220ENST00000492280 LAMB2P55268 1798 aa14.36□□□□□ -0.11
HMGN1-220ENST00000492280 ADAMTS3O15072 1205 aa14.36□□□□□ -0.11
HMGN1-220ENST00000492280 PRR29P0C7W0 189 aa14.36□□□□□ -0.11
HMGN1-220ENST00000492280 VEGFAP15692 232 aaPredicted RBP14.36□□□□□ -0.11
HMGN1-220ENST00000492280 CASP1P29466 404 aa14.36□□□□□ -0.11
HMGN1-220ENST00000492280 CAVIN4Q5BKX8 364 aa14.36□□□□□ -0.11
HMGN1-220ENST00000492280 MECOMQ03112 1051 aa14.35□□□□□ -0.11
HMGN1-220ENST00000492280 NCAPHQ15003 741 aa14.35□□□□□ -0.11
HMGN1-220ENST00000492280 TPD52L1Q16890 204 aaPredicted RBP14.35□□□□□ -0.11
HMGN1-220ENST00000492280 SARM1Q6SZW1 724 aa14.35□□□□□ -0.11
HMGN1-220ENST00000492280 TRIM22Q8IYM9 498 aa14.35□□□□□ -0.11
HMGN1-220ENST00000492280 CRACR2BQ8N4Y2 399 aaPredicted RBP14.35□□□□□ -0.11
HMGN1-220ENST00000492280 DPF2Q92785 391 aa14.35□□□□□ -0.11
HMGN1-220ENST00000492280 BSDC1Q9NW68 430 aaPredicted RBP14.35□□□□□ -0.11
HMGN1-220ENST00000492280 SKILP12757 684 aa14.35□□□□□ -0.11
HMGN1-220ENST00000492280 TERF1P54274 439 aa14.35□□□□□ -0.11
HMGN1-220ENST00000492280 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.35□□□□□ -0.11
HMGN1-220ENST00000492280 RREB1Q92766 1687 aa14.35□□□□□ -0.11
HMGN1-220ENST00000492280 GNAT2P19087 354 aa14.35□□□□□ -0.11
HMGN1-220ENST00000492280 PDE4BQ07343 736 aa14.35□□□□□ -0.11
HMGN1-220ENST00000492280 SEC23AQ15436 765 aa14.35□□□□□ -0.11
HMGN1-220ENST00000492280 SMARCC1Q92922 1105 aaPredicted RBP14.35□□□□□ -0.11
HMGN1-220ENST00000492280 MRFAP1L1Q96HT8 127 aa14.35□□□□□ -0.11
HMGN1-220ENST00000492280 KCNH3Q9ULD8 1083 aa14.35□□□□□ -0.11
HMGN1-220ENST00000492280 HPSEQ9Y251 543 aa14.35□□□□□ -0.11
HMGN1-220ENST00000492280 DYNC1I1O14576 645 aa14.34□□□□□ -0.11
HMGN1-220ENST00000492280 TNNT1P13805 278 aa14.34□□□□□ -0.11
HMGN1-220ENST00000492280 BMP6P22004 513 aa14.34□□□□□ -0.11
HMGN1-220ENST00000492280 NLRP12P59046 1061 aa14.34□□□□□ -0.11
HMGN1-220ENST00000492280 GRIK5Q16478 980 aa14.34□□□□□ -0.11
HMGN1-220ENST00000492280 RESP18Q5W5W9 173 aa14.34□□□□□ -0.11
HMGN1-220ENST00000492280 CTR9Q6PD62 1173 aa14.34□□□□□ -0.11
HMGN1-220ENST00000492280 BARGINQ6ZT62 677 aa14.34□□□□□ -0.11
HMGN1-220ENST00000492280 TRMT44Q8IYL2 757 aaKnown RBP14.34□□□□□ -0.11
HMGN1-220ENST00000492280 CNNM3Q8NE01 707 aa14.34□□□□□ -0.11
HMGN1-220ENST00000492280 SETDB2Q96T68 719 aa14.34□□□□□ -0.11
HMGN1-220ENST00000492280 NAT10Q9H0A0 1025 aaKnown RBP14.34□□□□□ -0.11
HMGN1-220ENST00000492280 HSD3B7Q9H2F3 369 aa14.34□□□□□ -0.11
HMGN1-220ENST00000492280 GNL3LQ9NVN8 582 aaKnown RBP14.34□□□□□ -0.11
HMGN1-220ENST00000492280 PCDHA5Q9Y5H7 936 aa14.34□□□□□ -0.11
HMGN1-220ENST00000492280 V9GY48 417 aaPredicted RBP14.34□□□□□ -0.11
HMGN1-220ENST00000492280 RTL9Q8NET4 1388 aa14.34□□□□□ -0.11
HMGN1-220ENST00000492280 POLR2DO15514 142 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms