RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 USP5P45974 858 aa18.32■□□□□ 0.52
SS18L1-204ENST00000491916 TM4SF4P48230 202 aa18.32■□□□□ 0.52
SS18L1-204ENST00000491916 ZMYM1Q5SVZ6 1142 aa18.32■□□□□ 0.52
SS18L1-204ENST00000491916 EVI5LQ96CN4 794 aa18.32■□□□□ 0.52
SS18L1-204ENST00000491916 MS4A4AQ96JQ5 239 aa18.32■□□□□ 0.52
SS18L1-204ENST00000491916 SEC62Q99442 399 aaKnown RBP18.32■□□□□ 0.52
SS18L1-204ENST00000491916 CRNKL1Q9BZJ0 848 aaKnown RBP18.32■□□□□ 0.52
SS18L1-204ENST00000491916 NAV1Q8NEY1 1877 aa18.31■□□□□ 0.52
SS18L1-204ENST00000491916 PLCD1P51178 756 aa18.31■□□□□ 0.52
SS18L1-204ENST00000491916 JAG1P78504 1218 aa18.31■□□□□ 0.52
SS18L1-204ENST00000491916 FSD1Q9BTV5 496 aa18.31■□□□□ 0.52
SS18L1-204ENST00000491916 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.31■□□□□ 0.52
SS18L1-204ENST00000491916 CSADQ9Y600 493 aa18.31■□□□□ 0.52
SS18L1-204ENST00000491916 BAZ2AQ9UIF9 1905 aaKnown RBP18.31■□□□□ 0.52
SS18L1-204ENST00000491916 PHIPQ8WWQ0 1821 aa18.3■□□□□ 0.52
SS18L1-204ENST00000491916 TESPA1A2RU30 521 aaPredicted RBP18.3■□□□□ 0.52
SS18L1-204ENST00000491916 SMIM22K7EJ46 135 aa18.3■□□□□ 0.52
SS18L1-204ENST00000491916 GABPAQ06546 454 aa18.3■□□□□ 0.52
SS18L1-204ENST00000491916 SLC4A8Q2Y0W8 1093 aa18.3■□□□□ 0.52
SS18L1-204ENST00000491916 ERO1BQ86YB8 467 aa18.3■□□□□ 0.52
SS18L1-204ENST00000491916 FOXP4Q8IVH2 680 aaPredicted RBP18.3■□□□□ 0.52
SS18L1-204ENST00000491916 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.3■□□□□ 0.52
SS18L1-204ENST00000491916 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.3■□□□□ 0.52
SS18L1-204ENST00000491916 HERC5Q9UII4 1024 aaKnown RBP18.3■□□□□ 0.52
SS18L1-204ENST00000491916 GSG1L2A8MUP6 293 aa18.29■□□□□ 0.52
SS18L1-204ENST00000491916 FOXP2O15409 715 aa18.29■□□□□ 0.52
SS18L1-204ENST00000491916 CTNND1O60716 968 aaKnown RBP18.29■□□□□ 0.52
SS18L1-204ENST00000491916 CYP2D6P10635 497 aa18.29■□□□□ 0.52
SS18L1-204ENST00000491916 SHROOM1Q2M3G4 852 aaPredicted RBP18.29■□□□□ 0.52
SS18L1-204ENST00000491916 SCYL3Q8IZE3 742 aa18.29■□□□□ 0.52
SS18L1-204ENST00000491916 AIDAQ96BJ3 306 aa18.29■□□□□ 0.52
SS18L1-204ENST00000491916 PTPN18Q99952 460 aa18.29■□□□□ 0.52
SS18L1-204ENST00000491916 ATP8A2Q9NTI2 1148 aa18.29■□□□□ 0.52
SS18L1-204ENST00000491916 DOCK1Q14185 1865 aa18.29■□□□□ 0.52
SS18L1-204ENST00000491916 IRF6O14896 467 aa18.28■□□□□ 0.52
SS18L1-204ENST00000491916 GPAA1O43292 621 aa18.28■□□□□ 0.52
SS18L1-204ENST00000491916 GSPT1P15170 499 aaKnown RBP18.28■□□□□ 0.52
SS18L1-204ENST00000491916 PTPRAP18433 802 aa18.28■□□□□ 0.52
SS18L1-204ENST00000491916 PPIL2Q13356 520 aa18.28■□□□□ 0.52
SS18L1-204ENST00000491916 REM2Q8IYK8 340 aaPredicted RBP18.28■□□□□ 0.52
SS18L1-204ENST00000491916 OTUD5Q96G74 571 aa18.28■□□□□ 0.52
SS18L1-204ENST00000491916 EHD4Q9H223 541 aa18.28■□□□□ 0.52
SS18L1-204ENST00000491916 RNF186Q9NXI6 227 aa18.28■□□□□ 0.52
SS18L1-204ENST00000491916 SLC4A4Q9Y6R1 1079 aa18.28■□□□□ 0.52
SS18L1-204ENST00000491916 IGF2BP3O00425 579 aaKnown RBP eCLIP18.27■□□□□ 0.52
SS18L1-204ENST00000491916 CENPBP07199 599 aaPredicted RBP18.27■□□□□ 0.52
SS18L1-204ENST00000491916 CAP2P40123 477 aa18.27■□□□□ 0.52
SS18L1-204ENST00000491916 PPATQ06203 517 aa18.27■□□□□ 0.52
SS18L1-204ENST00000491916 MOGSQ13724 837 aa18.27■□□□□ 0.52
SS18L1-204ENST00000491916 TATDN1Q6P1N9 297 aa18.27■□□□□ 0.52
SS18L1-204ENST00000491916 SKAP1Q86WV1 359 aa18.27■□□□□ 0.52
SS18L1-204ENST00000491916 TICAM2Q86XR7 235 aa18.27■□□□□ 0.52
SS18L1-204ENST00000491916 EPB41L4AQ9HCS5 686 aaPredicted RBP18.27■□□□□ 0.52
SS18L1-204ENST00000491916 MCM9Q9NXL9 1143 aa18.27■□□□□ 0.52
SS18L1-204ENST00000491916 KCNH4Q9UQ05 1017 aa18.27■□□□□ 0.52
SS18L1-204ENST00000491916 ATAD5Q96QE3 1844 aa18.26■□□□□ 0.51
SS18L1-204ENST00000491916 CYP2D7A0A087X1C5 515 aa18.26■□□□□ 0.51
SS18L1-204ENST00000491916 MANSC4A6NHS7 340 aaPredicted RBP18.26■□□□□ 0.51
SS18L1-204ENST00000491916 HLA-DOAP06340 250 aa18.26■□□□□ 0.51
SS18L1-204ENST00000491916 HSPA8P11142 646 aaKnown RBP18.26■□□□□ 0.51
SS18L1-204ENST00000491916 SHMT1P34896 483 aa18.26■□□□□ 0.51
SS18L1-204ENST00000491916 CTR9Q6PD62 1173 aa18.26■□□□□ 0.51
SS18L1-204ENST00000491916 CENPQQ7L2Z9 268 aaPredicted RBP18.26■□□□□ 0.51
SS18L1-204ENST00000491916 TTC6Q86TZ1 520 aa18.26■□□□□ 0.51
SS18L1-204ENST00000491916 CCDC84Q86UT8 332 aaPredicted RBP18.26■□□□□ 0.51
SS18L1-204ENST00000491916 BRI3BPQ8WY22 251 aa18.26■□□□□ 0.51
SS18L1-204ENST00000491916 FAM227BQ96M60 508 aa18.26■□□□□ 0.51
SS18L1-204ENST00000491916 SERPINB13Q9UIV8 391 aa18.26■□□□□ 0.51
SS18L1-204ENST00000491916 AFG3L2Q9Y4W6 797 aa18.26■□□□□ 0.51
SS18L1-204ENST00000491916 A0A0D9SFI3 127 aa18.25■□□□□ 0.51
SS18L1-204ENST00000491916 USP17L12C9JPN9 530 aa18.25■□□□□ 0.51
SS18L1-204ENST00000491916 USP17L21D6R901 530 aa18.25■□□□□ 0.51
SS18L1-204ENST00000491916 LRRFIP1Q32MZ4 808 aaKnown RBP18.25■□□□□ 0.51
SS18L1-204ENST00000491916 TTC22Q5TAA0 569 aa18.25■□□□□ 0.51
SS18L1-204ENST00000491916 C12orf60Q5U649 245 aa18.25■□□□□ 0.51
SS18L1-204ENST00000491916 CCDC129Q6ZRS4 1044 aa18.25■□□□□ 0.51
SS18L1-204ENST00000491916 IFNL1Q8IU54 200 aa18.25■□□□□ 0.51
SS18L1-204ENST00000491916 RILPL2Q969X0 211 aa18.25■□□□□ 0.51
SS18L1-204ENST00000491916 TSKSQ9UJT2 592 aa18.25■□□□□ 0.51
SS18L1-204ENST00000491916 PTPRFP10586 1907 aa18.24■□□□□ 0.51
SS18L1-204ENST00000491916 TRIM6-TRIM34B2RNG4 842 aa18.24■□□□□ 0.51
SS18L1-204ENST00000491916 TRPA1O75762 1119 aa18.24■□□□□ 0.51
SS18L1-204ENST00000491916 POLR3DP05423 398 aaPredicted RBP18.24■□□□□ 0.51
SS18L1-204ENST00000491916 SDSP20132 328 aa18.24■□□□□ 0.51
SS18L1-204ENST00000491916 INHBEP58166 350 aa18.24■□□□□ 0.51
SS18L1-204ENST00000491916 SREBF2Q12772 1141 aa18.24■□□□□ 0.51
SS18L1-204ENST00000491916 GIMAP6Q6P9H5 292 aa18.24■□□□□ 0.51
SS18L1-204ENST00000491916 R3HDMLQ9H3Y0 253 aa18.24■□□□□ 0.51
SS18L1-204ENST00000491916 SAGE1Q9NXZ1 904 aa18.24■□□□□ 0.51
SS18L1-204ENST00000491916 PATL2C9JE40 543 aaKnown RBP18.23■□□□□ 0.51
SS18L1-204ENST00000491916 CA12O43570 354 aa18.23■□□□□ 0.51
SS18L1-204ENST00000491916 GTF2A2P52657 109 aa18.23■□□□□ 0.51
SS18L1-204ENST00000491916 NMIQ13287 307 aaPredicted RBP18.23■□□□□ 0.51
SS18L1-204ENST00000491916 SBK1Q52WX2 424 aa18.23■□□□□ 0.51
SS18L1-204ENST00000491916 CRACR2BQ8N4Y2 399 aaPredicted RBP18.23■□□□□ 0.51
SS18L1-204ENST00000491916 SLC44A5Q8NCS7 719 aa18.23■□□□□ 0.51
SS18L1-204ENST00000491916 DYNLL2Q96FJ2 89 aa18.23■□□□□ 0.51
SS18L1-204ENST00000491916 HELLSQ9NRZ9 838 aa18.23■□□□□ 0.51
SS18L1-204ENST00000491916 ZHX2Q9Y6X8 837 aa18.23■□□□□ 0.51
SS18L1-204ENST00000491916 CXCL11O14625 94 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms