RNA–Protein interactions for RNA: ENST00000491915.1

COL6A4P1-203, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 5

Gene COL6A4P1, Length 1,251 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-203ENST00000491915 SHROOM1Q2M3G4 852 aaPredicted RBP10.85□□□□□ -0.67
COL6A4P1-203ENST00000491915 FBXO46Q6PJ61 603 aaPredicted RBP10.85□□□□□ -0.67
COL6A4P1-203ENST00000491915 C17orf99Q6UX52 265 aa10.85□□□□□ -0.67
COL6A4P1-203ENST00000491915 ANKRD23Q86SG2 305 aa10.85□□□□□ -0.67
COL6A4P1-203ENST00000491915 METTL16Q86W50 562 aaKnown RBP10.85□□□□□ -0.67
COL6A4P1-203ENST00000491915 FOXP4Q8IVH2 680 aaPredicted RBP10.85□□□□□ -0.67
COL6A4P1-203ENST00000491915 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.85□□□□□ -0.67
COL6A4P1-203ENST00000491915 NOL10Q9BSC4 688 aaKnown RBP10.85□□□□□ -0.67
COL6A4P1-203ENST00000491915 ARHGAP39Q9C0H5 1083 aa10.85□□□□□ -0.67
COL6A4P1-203ENST00000491915 DNAJC18Q9H819 358 aa10.85□□□□□ -0.67
COL6A4P1-203ENST00000491915 PI4KBQ9UBF8 816 aa10.85□□□□□ -0.67
COL6A4P1-203ENST00000491915 CPA4Q9UI42 421 aa10.85□□□□□ -0.67
COL6A4P1-203ENST00000491915 A0A0G2JLL6 359 aaPredicted RBP10.84□□□□□ -0.67
COL6A4P1-203ENST00000491915 TCRBV5S4A2TA0A5A2 114 aa10.84□□□□□ -0.67
COL6A4P1-203ENST00000491915 IGSF3O75054 1194 aa10.84□□□□□ -0.67
COL6A4P1-203ENST00000491915 ECM2O94769 699 aaPredicted RBP10.84□□□□□ -0.67
COL6A4P1-203ENST00000491915 PDE6AP16499 860 aa10.84□□□□□ -0.67
COL6A4P1-203ENST00000491915 CTGFP29279 349 aa10.84□□□□□ -0.67
COL6A4P1-203ENST00000491915 CAP2P40123 477 aa10.84□□□□□ -0.67
COL6A4P1-203ENST00000491915 SOX10P56693 466 aa10.84□□□□□ -0.67
COL6A4P1-203ENST00000491915 SPP2Q13103 211 aa10.84□□□□□ -0.67
COL6A4P1-203ENST00000491915 SLC4A8Q2Y0W8 1093 aa10.84□□□□□ -0.67
COL6A4P1-203ENST00000491915 SLC9C2Q5TAH2 1124 aa10.84□□□□□ -0.67
COL6A4P1-203ENST00000491915 PRRT2Q7Z6L0 340 aaPredicted RBP10.84□□□□□ -0.67
COL6A4P1-203ENST00000491915 ERO1AQ96HE7 468 aa10.84□□□□□ -0.67
COL6A4P1-203ENST00000491915 DNAJC2Q99543 621 aaKnown RBP10.84□□□□□ -0.67
COL6A4P1-203ENST00000491915 RIOK1Q9BRS2 568 aaKnown RBP10.84□□□□□ -0.67
COL6A4P1-203ENST00000491915 EFCC1Q9HA90 598 aa10.84□□□□□ -0.67
COL6A4P1-203ENST00000491915 ZCCHC17Q9NP64 241 aaKnown RBP10.84□□□□□ -0.67
COL6A4P1-203ENST00000491915 PTPN22Q9Y2R2 807 aa10.84□□□□□ -0.67
COL6A4P1-203ENST00000491915 FLT1P17948 1338 aa10.84□□□□□ -0.67
COL6A4P1-203ENST00000491915 TRIM75PA6NK02 468 aa10.83□□□□□ -0.68
COL6A4P1-203ENST00000491915 CYP2C8P10632 490 aa10.83□□□□□ -0.68
COL6A4P1-203ENST00000491915 RRP1P56182 461 aaKnown RBP10.83□□□□□ -0.68
COL6A4P1-203ENST00000491915 EVX2Q03828 476 aa10.83□□□□□ -0.68
COL6A4P1-203ENST00000491915 CRBNQ96SW2 442 aa10.83□□□□□ -0.68
COL6A4P1-203ENST00000491915 HAUS7Q99871 368 aa10.83□□□□□ -0.68
COL6A4P1-203ENST00000491915 LRRCC1Q9C099 1032 aa10.83□□□□□ -0.68
COL6A4P1-203ENST00000491915 DHX36Q9H2U1 1008 aaKnown RBP10.83□□□□□ -0.68
COL6A4P1-203ENST00000491915 ADGRA2Q96PE1 1338 aa10.83□□□□□ -0.68
COL6A4P1-203ENST00000491915 ZNF532Q9HCE3 1301 aa10.83□□□□□ -0.68
COL6A4P1-203ENST00000491915 LAMB1P07942 1786 aa10.82□□□□□ -0.68
COL6A4P1-203ENST00000491915 PLCD1P51178 756 aa10.82□□□□□ -0.68
COL6A4P1-203ENST00000491915 TTF1Q15361 905 aaPredicted RBP10.82□□□□□ -0.68
COL6A4P1-203ENST00000491915 GADL1Q6ZQY3 521 aa10.82□□□□□ -0.68
COL6A4P1-203ENST00000491915 FASTKD5Q7L8L6 764 aaKnown RBP10.82□□□□□ -0.68
COL6A4P1-203ENST00000491915 PAG1Q9NWQ8 432 aa10.82□□□□□ -0.68
COL6A4P1-203ENST00000491915 HERC5Q9UII4 1024 aaKnown RBP10.82□□□□□ -0.68
COL6A4P1-203ENST00000491915 MAGEB6P1A0A0J9YX57 407 aa10.81□□□□□ -0.68
COL6A4P1-203ENST00000491915 USP17L5A8MUK1 530 aa10.81□□□□□ -0.68
COL6A4P1-203ENST00000491915 SMIM22K7EJ46 135 aa10.81□□□□□ -0.68
COL6A4P1-203ENST00000491915 PRKAB2O43741 272 aa10.81□□□□□ -0.68
COL6A4P1-203ENST00000491915 BCRP11274 1271 aa10.81□□□□□ -0.68
COL6A4P1-203ENST00000491915 USP5P45974 858 aa10.81□□□□□ -0.68
COL6A4P1-203ENST00000491915 LACTBP83111 547 aaPredicted RBP10.81□□□□□ -0.68
COL6A4P1-203ENST00000491915 TREML2Q5T2D2 321 aa10.81□□□□□ -0.68
COL6A4P1-203ENST00000491915 TSHZ3Q63HK5 1081 aa10.81□□□□□ -0.68
COL6A4P1-203ENST00000491915 ZNF280CQ8ND82 737 aa10.81□□□□□ -0.68
COL6A4P1-203ENST00000491915 COL2A1P02458 1487 aaPredicted RBP10.81□□□□□ -0.68
COL6A4P1-203ENST00000491915 GDF11O95390 407 aa10.8□□□□□ -0.68
COL6A4P1-203ENST00000491915 CYP2D6P10635 497 aa10.8□□□□□ -0.68
COL6A4P1-203ENST00000491915 ADD2P35612 726 aa10.8□□□□□ -0.68
COL6A4P1-203ENST00000491915 PSMC4P43686 418 aa10.8□□□□□ -0.68
COL6A4P1-203ENST00000491915 MLLT1Q03111 559 aaPredicted RBP10.8□□□□□ -0.68
COL6A4P1-203ENST00000491915 TATDN1Q6P1N9 297 aa10.8□□□□□ -0.68
COL6A4P1-203ENST00000491915 LCORLQ8N3X6 602 aa10.8□□□□□ -0.68
COL6A4P1-203ENST00000491915 CRACR2BQ8N4Y2 399 aaPredicted RBP10.8□□□□□ -0.68
COL6A4P1-203ENST00000491915 OTUD7AQ8TE49 926 aaPredicted RBP10.8□□□□□ -0.68
COL6A4P1-203ENST00000491915 TRIM47Q96LD4 638 aa10.8□□□□□ -0.68
COL6A4P1-203ENST00000491915 WDR18Q9BV38 432 aa10.8□□□□□ -0.68
COL6A4P1-203ENST00000491915 ARMT1Q9H993 441 aa10.8□□□□□ -0.68
COL6A4P1-203ENST00000491915 ECHDC1Q9NTX5 307 aa10.8□□□□□ -0.68
COL6A4P1-203ENST00000491915 PTCH2Q9Y6C5 1203 aa10.8□□□□□ -0.68
COL6A4P1-203ENST00000491915 SIPA1L1O43166 1804 aa10.79□□□□□ -0.68
COL6A4P1-203ENST00000491915 PHIPQ8WWQ0 1821 aa10.79□□□□□ -0.68
COL6A4P1-203ENST00000491915 DOCK2Q92608 1830 aa10.79□□□□□ -0.68
COL6A4P1-203ENST00000491915 CDK5RAP2Q96SN8 1893 aa10.79□□□□□ -0.68
COL6A4P1-203ENST00000491915 POTEFA5A3E0 1075 aa10.79□□□□□ -0.68
COL6A4P1-203ENST00000491915 HMGCS2P54868 508 aa10.79□□□□□ -0.68
COL6A4P1-203ENST00000491915 SH3D19Q5HYK7 790 aa10.79□□□□□ -0.68
COL6A4P1-203ENST00000491915 SDR42E1Q8WUS8 393 aa10.79□□□□□ -0.68
COL6A4P1-203ENST00000491915 PEX10O60683 326 aa10.78□□□□□ -0.68
COL6A4P1-203ENST00000491915 MBD4O95243 580 aa10.78□□□□□ -0.68
COL6A4P1-203ENST00000491915 GH2P01242 217 aa10.78□□□□□ -0.68
COL6A4P1-203ENST00000491915 POLR3DP05423 398 aaPredicted RBP10.78□□□□□ -0.68
COL6A4P1-203ENST00000491915 GUCY1A2P33402 732 aa10.78□□□□□ -0.68
COL6A4P1-203ENST00000491915 SHMT1P34896 483 aa10.78□□□□□ -0.68
COL6A4P1-203ENST00000491915 BACE1P56817 501 aa10.78□□□□□ -0.68
COL6A4P1-203ENST00000491915 GABPAQ06546 454 aa10.78□□□□□ -0.68
COL6A4P1-203ENST00000491915 TMED8Q6PL24 325 aaPredicted RBP10.78□□□□□ -0.68
COL6A4P1-203ENST00000491915 TTC6Q86TZ1 520 aa10.78□□□□□ -0.68
COL6A4P1-203ENST00000491915 ARMC5Q96C12 935 aa10.78□□□□□ -0.68
COL6A4P1-203ENST00000491915 PARK7Q99497 189 aaKnown RBP10.78□□□□□ -0.68
COL6A4P1-203ENST00000491915 P2RX7Q99572 595 aaKnown RBP10.78□□□□□ -0.68
COL6A4P1-203ENST00000491915 PUS7LQ9H0K6 701 aaKnown RBP10.78□□□□□ -0.68
COL6A4P1-203ENST00000491915 DCP1AQ9NPI6 582 aaPredicted RBP10.78□□□□□ -0.68
COL6A4P1-203ENST00000491915 EMILIN3Q9NT22 766 aa10.78□□□□□ -0.68
COL6A4P1-203ENST00000491915 SERPINB13Q9UIV8 391 aa10.78□□□□□ -0.68
COL6A4P1-203ENST00000491915 ZBTB21Q9ULJ3 1066 aa10.78□□□□□ -0.68
COL6A4P1-203ENST00000491915 AGTPBP1Q9UPW5 1226 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms