RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 GABRQQ9UN88 632 aa10.97□□□□□ -0.65
HDAC3-211ENST00000491581 AFG3L2Q9Y4W6 797 aa10.97□□□□□ -0.65
HDAC3-211ENST00000491581 PDS5AQ29RF7 1337 aaKnown RBP10.96□□□□□ -0.65
HDAC3-211ENST00000491581 ZBED9Q6R2W3 1325 aa10.96□□□□□ -0.65
HDAC3-211ENST00000491581 SIRT2Q8IXJ6 389 aa10.96□□□□□ -0.65
HDAC3-211ENST00000491581 TEX11Q8IYF3 940 aa10.96□□□□□ -0.65
HDAC3-211ENST00000491581 ZGPATQ8N5A5 531 aaKnown RBP10.96□□□□□ -0.65
HDAC3-211ENST00000491581 MIGA1Q8NAN2 632 aa10.96□□□□□ -0.65
HDAC3-211ENST00000491581 TGFBRAP1Q8WUH2 860 aa10.96□□□□□ -0.65
HDAC3-211ENST00000491581 EDC3Q96F86 508 aaKnown RBP10.96□□□□□ -0.65
HDAC3-211ENST00000491581 OSBPL5Q9H0X9 879 aaPredicted RBP10.96□□□□□ -0.65
HDAC3-211ENST00000491581 DNAJC18Q9H819 358 aa10.96□□□□□ -0.65
HDAC3-211ENST00000491581 PCDH10Q9P2E7 1040 aa10.96□□□□□ -0.65
HDAC3-211ENST00000491581 HDAC5Q9UQL6 1122 aa10.96□□□□□ -0.65
HDAC3-211ENST00000491581 COG6Q9Y2V7 657 aa10.96□□□□□ -0.65
HDAC3-211ENST00000491581 PLXNB2O15031 1838 aa10.95□□□□□ -0.66
HDAC3-211ENST00000491581 OSBPP22059 807 aa10.95□□□□□ -0.66
HDAC3-211ENST00000491581 PSMC4P43686 418 aa10.95□□□□□ -0.66
HDAC3-211ENST00000491581 MAP3K10Q02779 954 aa10.95□□□□□ -0.66
HDAC3-211ENST00000491581 SLC9C1Q4G0N8 1177 aa10.95□□□□□ -0.66
HDAC3-211ENST00000491581 SPTY2D1Q68D10 685 aaPredicted RBP10.95□□□□□ -0.66
HDAC3-211ENST00000491581 ANKRD23Q86SG2 305 aa10.95□□□□□ -0.66
HDAC3-211ENST00000491581 ARMC5Q96C12 935 aa10.95□□□□□ -0.66
HDAC3-211ENST00000491581 ZNF333Q96JL9 665 aa10.95□□□□□ -0.66
HDAC3-211ENST00000491581 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.95□□□□□ -0.66
HDAC3-211ENST00000491581 PALD1Q9ULE6 856 aa10.95□□□□□ -0.66
HDAC3-211ENST00000491581 DDX60LQ5H9U9 1706 aaKnown RBP10.95□□□□□ -0.66
HDAC3-211ENST00000491581 DOCK3Q8IZD9 2030 aa10.94□□□□□ -0.66
HDAC3-211ENST00000491581 NAV1Q8NEY1 1877 aa10.94□□□□□ -0.66
HDAC3-211ENST00000491581 A0A0G2JLL6 359 aaPredicted RBP10.94□□□□□ -0.66
HDAC3-211ENST00000491581 SMIM22K7EJ46 135 aa10.94□□□□□ -0.66
HDAC3-211ENST00000491581 GDF11O95390 407 aa10.94□□□□□ -0.66
HDAC3-211ENST00000491581 PRKCZQ05513 592 aa10.94□□□□□ -0.66
HDAC3-211ENST00000491581 NAA16Q6N069 864 aaPredicted RBP10.94□□□□□ -0.66
HDAC3-211ENST00000491581 SAMD1Q6SPF0 538 aaPredicted RBP10.94□□□□□ -0.66
HDAC3-211ENST00000491581 PRRT2Q7Z6L0 340 aaPredicted RBP10.94□□□□□ -0.66
HDAC3-211ENST00000491581 HOOK2Q96ED9 719 aa10.94□□□□□ -0.66
HDAC3-211ENST00000491581 PICK1Q9NRD5 415 aa10.94□□□□□ -0.66
HDAC3-211ENST00000491581 NOP58Q9Y2X3 529 aaKnown RBP10.94□□□□□ -0.66
HDAC3-211ENST00000491581 FLT1P17948 1338 aa10.93□□□□□ -0.66
HDAC3-211ENST00000491581 IDH1O75874 414 aaKnown RBP10.93□□□□□ -0.66
HDAC3-211ENST00000491581 FMNL1O95466 1100 aaPredicted RBP10.93□□□□□ -0.66
HDAC3-211ENST00000491581 UQCRFS1P1P0C7P4 283 aa10.93□□□□□ -0.66
HDAC3-211ENST00000491581 BCRP11274 1271 aa10.93□□□□□ -0.66
HDAC3-211ENST00000491581 ELNP15502 786 aa10.93□□□□□ -0.66
HDAC3-211ENST00000491581 SPP2Q13103 211 aa10.93□□□□□ -0.66
HDAC3-211ENST00000491581 AACSQ86V21 672 aa10.93□□□□□ -0.66
HDAC3-211ENST00000491581 SP7Q8TDD2 431 aaPredicted RBP10.93□□□□□ -0.66
HDAC3-211ENST00000491581 SHISA4Q96DD7 197 aa10.93□□□□□ -0.66
HDAC3-211ENST00000491581 MYPNQ86TC9 1320 aa10.92□□□□□ -0.66
HDAC3-211ENST00000491581 CXCL11O14625 94 aa10.92□□□□□ -0.66
HDAC3-211ENST00000491581 ZBTB22O15209 634 aa10.92□□□□□ -0.66
HDAC3-211ENST00000491581 CYP7A1P22680 504 aa10.92□□□□□ -0.66
HDAC3-211ENST00000491581 HMGCS2P54868 508 aa10.92□□□□□ -0.66
HDAC3-211ENST00000491581 CCDC158Q5M9N0 1113 aa10.92□□□□□ -0.66
HDAC3-211ENST00000491581 ANKRD13CQ8N6S4 541 aa10.92□□□□□ -0.66
HDAC3-211ENST00000491581 MAGEB6Q8N7X4 407 aa10.92□□□□□ -0.66
HDAC3-211ENST00000491581 GPR108Q9NPR9 543 aa10.92□□□□□ -0.66
HDAC3-211ENST00000491581 BAZ2AQ9UIF9 1905 aaKnown RBP10.92□□□□□ -0.66
HDAC3-211ENST00000491581 SMARCA5O60264 1052 aaPredicted RBP10.91□□□□□ -0.66
HDAC3-211ENST00000491581 CTNND1O60716 968 aaKnown RBP10.91□□□□□ -0.66
HDAC3-211ENST00000491581 SLC34A2O95436 690 aa10.91□□□□□ -0.66
HDAC3-211ENST00000491581 LDHCP07864 332 aa10.91□□□□□ -0.66
HDAC3-211ENST00000491581 CAP2P40123 477 aa10.91□□□□□ -0.66
HDAC3-211ENST00000491581 GSTO1P78417 241 aa10.91□□□□□ -0.66
HDAC3-211ENST00000491581 POTEEQ6S8J3 1075 aa10.91□□□□□ -0.66
HDAC3-211ENST00000491581 SLF2Q8IX21 1173 aa10.91□□□□□ -0.66
HDAC3-211ENST00000491581 SRRDQ9UH36 339 aa10.91□□□□□ -0.66
HDAC3-211ENST00000491581 TAOK2Q9UL54 1235 aa10.91□□□□□ -0.66
HDAC3-211ENST00000491581 ALPK3Q96L96 1907 aa10.9□□□□□ -0.66
HDAC3-211ENST00000491581 COL2A1P02458 1487 aaPredicted RBP10.9□□□□□ -0.66
HDAC3-211ENST00000491581 TRIM32Q13049 653 aa10.9□□□□□ -0.66
HDAC3-211ENST00000491581 MTMR2Q13614 643 aa10.9□□□□□ -0.66
HDAC3-211ENST00000491581 KIF22Q14807 665 aa10.9□□□□□ -0.66
HDAC3-211ENST00000491581 ZYXQ15942 572 aaKnown RBP10.9□□□□□ -0.66
HDAC3-211ENST00000491581 PRPF38BQ5VTL8 546 aaKnown RBP10.9□□□□□ -0.66
HDAC3-211ENST00000491581 RHPN1Q8TCX5 695 aa10.9□□□□□ -0.66
HDAC3-211ENST00000491581 PARK7Q99497 189 aaKnown RBP10.9□□□□□ -0.66
HDAC3-211ENST00000491581 ZCCHC17Q9NP64 241 aaKnown RBP10.9□□□□□ -0.66
HDAC3-211ENST00000491581 TBC1D12O60347 775 aa10.89□□□□□ -0.67
HDAC3-211ENST00000491581 CYP2D6P10635 497 aa10.89□□□□□ -0.67
HDAC3-211ENST00000491581 FLT3LGP49771 235 aa10.89□□□□□ -0.67
HDAC3-211ENST00000491581 PLCD1P51178 756 aa10.89□□□□□ -0.67
HDAC3-211ENST00000491581 PPP4CP60510 307 aa10.89□□□□□ -0.67
HDAC3-211ENST00000491581 ZNF280CQ8ND82 737 aa10.89□□□□□ -0.67
HDAC3-211ENST00000491581 RAET1EQ8TD07 263 aa10.89□□□□□ -0.67
HDAC3-211ENST00000491581 DNAJC2Q99543 621 aaKnown RBP10.89□□□□□ -0.67
HDAC3-211ENST00000491581 UNC93B1Q9H1C4 597 aa10.89□□□□□ -0.67
HDAC3-211ENST00000491581 ZBTB40Q9NUA8 1239 aa10.89□□□□□ -0.67
HDAC3-211ENST00000491581 AGTPBP1Q9UPW5 1226 aa10.89□□□□□ -0.67
HDAC3-211ENST00000491581 MYH7P12883 1935 aa10.89□□□□□ -0.67
HDAC3-211ENST00000491581 GOLIM4O00461 696 aa10.88□□□□□ -0.67
HDAC3-211ENST00000491581 CCL5P13501 91 aa10.88□□□□□ -0.67
HDAC3-211ENST00000491581 GRK4P32298 578 aa10.88□□□□□ -0.67
HDAC3-211ENST00000491581 FASTKD5Q7L8L6 764 aaKnown RBP10.88□□□□□ -0.67
HDAC3-211ENST00000491581 CLEC10AQ8IUN9 316 aa10.88□□□□□ -0.67
HDAC3-211ENST00000491581 SMCR8Q8TEV9 937 aaPredicted RBP10.88□□□□□ -0.67
HDAC3-211ENST00000491581 SDR42E1Q8WUS8 393 aa10.88□□□□□ -0.67
HDAC3-211ENST00000491581 ZNF512BQ96KM6 892 aaPredicted RBP10.88□□□□□ -0.67
HDAC3-211ENST00000491581 NOL10Q9BSC4 688 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms