RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 RHPN1Q8TCX5 695 aa10.08□□□□□ -0.8
LSM2-213ENST00000491421 TGFBRAP1Q8WUH2 860 aa10.08□□□□□ -0.8
LSM2-213ENST00000491421 DHX36Q9H2U1 1008 aaKnown RBP10.08□□□□□ -0.8
LSM2-213ENST00000491421 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.08□□□□□ -0.8
LSM2-213ENST00000491421 HERC5Q9UII4 1024 aaKnown RBP10.08□□□□□ -0.8
LSM2-213ENST00000491421 PTCH2Q9Y6C5 1203 aa10.08□□□□□ -0.8
LSM2-213ENST00000491421 NDUFB9Q9Y6M9 179 aa10.08□□□□□ -0.8
LSM2-213ENST00000491421 FLT1P17948 1338 aa10.07□□□□□ -0.8
LSM2-213ENST00000491421 ADGRA2Q96PE1 1338 aa10.07□□□□□ -0.8
LSM2-213ENST00000491421 DOCK2Q92608 1830 aa10.07□□□□□ -0.8
LSM2-213ENST00000491421 TNRC18O15417 2968 aaPredicted RBP10.07□□□□□ -0.8
LSM2-213ENST00000491421 ECM2O94769 699 aaPredicted RBP10.07□□□□□ -0.8
LSM2-213ENST00000491421 GNRH1P01148 92 aa10.07□□□□□ -0.8
LSM2-213ENST00000491421 CYP2C8P10632 490 aa10.07□□□□□ -0.8
LSM2-213ENST00000491421 MAP3K12Q12852 859 aa10.07□□□□□ -0.8
LSM2-213ENST00000491421 SLC9C1Q4G0N8 1177 aa10.07□□□□□ -0.8
LSM2-213ENST00000491421 SIRT2Q8IXJ6 389 aa10.07□□□□□ -0.8
LSM2-213ENST00000491421 CLASRPQ8N2M8 674 aaKnown RBP10.07□□□□□ -0.8
LSM2-213ENST00000491421 MAGEB6Q8N7X4 407 aa10.07□□□□□ -0.8
LSM2-213ENST00000491421 ARMC5Q96C12 935 aa10.07□□□□□ -0.8
LSM2-213ENST00000491421 KIF1BPQ96EK5 621 aa10.07□□□□□ -0.8
LSM2-213ENST00000491421 TRIM34Q9BYJ4 488 aa10.07□□□□□ -0.8
LSM2-213ENST00000491421 BCL11AQ9H165 835 aa10.07□□□□□ -0.8
LSM2-213ENST00000491421 PI4KBQ9UBF8 816 aa10.07□□□□□ -0.8
LSM2-213ENST00000491421 MAST2Q6P0Q8 1798 aa10.06□□□□□ -0.8
LSM2-213ENST00000491421 IFIT2P09913 472 aaKnown RBP10.06□□□□□ -0.8
LSM2-213ENST00000491421 CAP2P40123 477 aa10.06□□□□□ -0.8
LSM2-213ENST00000491421 PSMC4P43686 418 aa10.06□□□□□ -0.8
LSM2-213ENST00000491421 PRMT2P55345 433 aa10.06□□□□□ -0.8
LSM2-213ENST00000491421 DYNLL1P63167 89 aaKnown RBP10.06□□□□□ -0.8
LSM2-213ENST00000491421 PDE3AQ14432 1141 aa10.06□□□□□ -0.8
LSM2-213ENST00000491421 TMED8Q6PL24 325 aaPredicted RBP10.06□□□□□ -0.8
LSM2-213ENST00000491421 NBPF11Q86T75 865 aa10.06□□□□□ -0.8
LSM2-213ENST00000491421 CERS3Q8IU89 383 aa10.06□□□□□ -0.8
LSM2-213ENST00000491421 CRACR2BQ8N4Y2 399 aaPredicted RBP10.06□□□□□ -0.8
LSM2-213ENST00000491421 MIGA1Q8NAN2 632 aa10.06□□□□□ -0.8
LSM2-213ENST00000491421 ZNF333Q96JL9 665 aa10.06□□□□□ -0.8
LSM2-213ENST00000491421 TRIM47Q96LD4 638 aa10.06□□□□□ -0.8
LSM2-213ENST00000491421 ANTXR1Q9H6X2 564 aa10.06□□□□□ -0.8
LSM2-213ENST00000491421 SAP30BPQ9UHR5 308 aaKnown RBP10.06□□□□□ -0.8
LSM2-213ENST00000491421 PALD1Q9ULE6 856 aa10.06□□□□□ -0.8
LSM2-213ENST00000491421 SLC45A1Q9Y2W3 748 aa10.06□□□□□ -0.8
LSM2-213ENST00000491421 CENPFP49454 3210 aa10.06□□□□□ -0.8
LSM2-213ENST00000491421 AK9Q5TCS8 1911 aa10.05□□□□□ -0.8
LSM2-213ENST00000491421 POTEFA5A3E0 1075 aa10.05□□□□□ -0.8
LSM2-213ENST00000491421 USP17L5A8MUK1 530 aa10.05□□□□□ -0.8
LSM2-213ENST00000491421 RAB11FIP3O75154 756 aa10.05□□□□□ -0.8
LSM2-213ENST00000491421 FMNL1O95466 1100 aaPredicted RBP10.05□□□□□ -0.8
LSM2-213ENST00000491421 HLA-DOAP06340 250 aa10.05□□□□□ -0.8
LSM2-213ENST00000491421 BCRP11274 1271 aa10.05□□□□□ -0.8
LSM2-213ENST00000491421 HOXD10P28358 340 aa10.05□□□□□ -0.8
LSM2-213ENST00000491421 USP5P45974 858 aa10.05□□□□□ -0.8
LSM2-213ENST00000491421 SPP2Q13103 211 aa10.05□□□□□ -0.8
LSM2-213ENST00000491421 RRP1BQ14684 758 aaKnown RBP10.05□□□□□ -0.8
LSM2-213ENST00000491421 TTF1Q15361 905 aaPredicted RBP10.05□□□□□ -0.8
LSM2-213ENST00000491421 C20orf194Q5TEA3 1177 aa10.05□□□□□ -0.8
LSM2-213ENST00000491421 FOXP4Q8IVH2 680 aaPredicted RBP10.05□□□□□ -0.8
LSM2-213ENST00000491421 ZNF280CQ8ND82 737 aa10.05□□□□□ -0.8
LSM2-213ENST00000491421 SMCR8Q8TEV9 937 aaPredicted RBP10.05□□□□□ -0.8
LSM2-213ENST00000491421 DNAJC2Q99543 621 aaKnown RBP10.05□□□□□ -0.8
LSM2-213ENST00000491421 TMEM106CQ9BVX2 250 aa10.05□□□□□ -0.8
LSM2-213ENST00000491421 TBC1D2Q9BYX2 928 aa10.05□□□□□ -0.8
LSM2-213ENST00000491421 AS3MTQ9HBK9 375 aa10.05□□□□□ -0.8
LSM2-213ENST00000491421 AGTPBP1Q9UPW5 1226 aa10.05□□□□□ -0.8
LSM2-213ENST00000491421 ASNSP08243 561 aa10.04□□□□□ -0.8
LSM2-213ENST00000491421 OSBPP22059 807 aa10.04□□□□□ -0.8
LSM2-213ENST00000491421 CTGFP29279 349 aa10.04□□□□□ -0.8
LSM2-213ENST00000491421 HMGCS2P54868 508 aa10.04□□□□□ -0.8
LSM2-213ENST00000491421 FCGRTP55899 365 aa10.04□□□□□ -0.8
LSM2-213ENST00000491421 SLC4A8Q2Y0W8 1093 aa10.04□□□□□ -0.8
LSM2-213ENST00000491421 TPRNQ4KMQ1 711 aa10.04□□□□□ -0.8
LSM2-213ENST00000491421 TREML2Q5T2D2 321 aa10.04□□□□□ -0.8
LSM2-213ENST00000491421 METTL16Q86W50 562 aaKnown RBP10.04□□□□□ -0.8
LSM2-213ENST00000491421 PROCA1Q8NCQ7 364 aaPredicted RBP10.04□□□□□ -0.8
LSM2-213ENST00000491421 SH3TC2Q8TF17 1288 aa10.04□□□□□ -0.8
LSM2-213ENST00000491421 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.04□□□□□ -0.8
LSM2-213ENST00000491421 DNAJC18Q9H819 358 aa10.04□□□□□ -0.8
LSM2-213ENST00000491421 SRRDQ9UH36 339 aa10.04□□□□□ -0.8
LSM2-213ENST00000491421 PNMA3Q9UL41 463 aa10.04□□□□□ -0.8
LSM2-213ENST00000491421 DOCK1Q14185 1865 aa10.04□□□□□ -0.8
LSM2-213ENST00000491421 GOLIM4O00461 696 aa10.03□□□□□ -0.8
LSM2-213ENST00000491421 GDF11O95390 407 aa10.03□□□□□ -0.8
LSM2-213ENST00000491421 MYCP01106 439 aaPredicted RBP10.03□□□□□ -0.8
LSM2-213ENST00000491421 PDE6AP16499 860 aa10.03□□□□□ -0.8
LSM2-213ENST00000491421 PABPC4Q13310 644 aaKnown RBP eCLIP10.03□□□□□ -0.82e-7■■■■□ 25.3
LSM2-213ENST00000491421 SLC9C2Q5TAH2 1124 aa10.03□□□□□ -0.8
LSM2-213ENST00000491421 RAET1EQ8TD07 263 aa10.03□□□□□ -0.8
LSM2-213ENST00000491421 MYPNQ86TC9 1320 aa10.03□□□□□ -0.8
LSM2-213ENST00000491421 MAGEB6P1A0A0J9YX57 407 aa10.02□□□□□ -0.81
LSM2-213ENST00000491421 EN2P19622 333 aaPredicted RBP10.02□□□□□ -0.81
LSM2-213ENST00000491421 GRK4P32298 578 aa10.02□□□□□ -0.81
LSM2-213ENST00000491421 JAG1P78504 1218 aa10.02□□□□□ -0.81
LSM2-213ENST00000491421 PRKCZQ05513 592 aa10.02□□□□□ -0.81
LSM2-213ENST00000491421 MTMR2Q13614 643 aa10.02□□□□□ -0.81
LSM2-213ENST00000491421 SH3D19Q5HYK7 790 aa10.02□□□□□ -0.81
LSM2-213ENST00000491421 TTC6Q86TZ1 520 aa10.02□□□□□ -0.81
LSM2-213ENST00000491421 ANKRD13CQ8N6S4 541 aa10.02□□□□□ -0.81
LSM2-213ENST00000491421 RIOK1Q9BRS2 568 aaKnown RBP10.02□□□□□ -0.81
LSM2-213ENST00000491421 WDR18Q9BV38 432 aa10.02□□□□□ -0.81
LSM2-213ENST00000491421 CRNKL1Q9BZJ0 848 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms