RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 C3orf58Q8NDZ4 430 aa8.08□□□□□ -1.12
PHC3-213ENST00000491258 FAM84AQ96KN4 292 aa8.08□□□□□ -1.12
PHC3-213ENST00000491258 CACNA2D2Q9NY47 1150 aa8.08□□□□□ -1.12
PHC3-213ENST00000491258 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.08□□□□□ -1.12
PHC3-213ENST00000491258 PCDHA4Q9UN74 947 aa8.08□□□□□ -1.12
PHC3-213ENST00000491258 FBXO24O75426 580 aa8.07□□□□□ -1.12
PHC3-213ENST00000491258 TRIM37O94972 964 aa8.07□□□□□ -1.12
PHC3-213ENST00000491258 BMP6P22004 513 aa8.07□□□□□ -1.12
PHC3-213ENST00000491258 MAPK1P28482 360 aa8.07□□□□□ -1.12
PHC3-213ENST00000491258 GSTT1P30711 240 aa8.07□□□□□ -1.12
PHC3-213ENST00000491258 NTF4P34130 210 aa8.07□□□□□ -1.12
PHC3-213ENST00000491258 PDE4CQ08493 712 aa8.07□□□□□ -1.12
PHC3-213ENST00000491258 DSC3Q14574 896 aa8.07□□□□□ -1.12
PHC3-213ENST00000491258 ENOX2Q16206 610 aaKnown RBP8.07□□□□□ -1.12
PHC3-213ENST00000491258 NKPD1Q17RQ9 610 aa8.07□□□□□ -1.12
PHC3-213ENST00000491258 ZBTB37Q5TC79 503 aa8.07□□□□□ -1.12
PHC3-213ENST00000491258 LLGL2Q6P1M3 1020 aa8.07□□□□□ -1.12
PHC3-213ENST00000491258 ELMO3Q96BJ8 720 aa8.07□□□□□ -1.12
PHC3-213ENST00000491258 CEP44Q9C0F1 390 aa8.07□□□□□ -1.12
PHC3-213ENST00000491258 ENC1O14682 589 aa8.06□□□□□ -1.12
PHC3-213ENST00000491258 FANCGO15287 622 aa8.06□□□□□ -1.12
PHC3-213ENST00000491258 PAGE1O75459 146 aa8.06□□□□□ -1.12
PHC3-213ENST00000491258 CLCN7P51798 805 aa8.06□□□□□ -1.12
PHC3-213ENST00000491258 MESP2Q0VG99 397 aa8.06□□□□□ -1.12
PHC3-213ENST00000491258 KRTAP4-5Q9BYR2 181 aa8.06□□□□□ -1.12
PHC3-213ENST00000491258 PRDM5Q9NQX1 630 aaPredicted RBP8.06□□□□□ -1.12
PHC3-213ENST00000491258 FAM53CQ9NYF3 392 aa8.06□□□□□ -1.12
PHC3-213ENST00000491258 CTNND2Q9UQB3 1225 aa8.06□□□□□ -1.12
PHC3-213ENST00000491258 PITPNM2Q9BZ72 1349 aa8.05□□□□□ -1.12
PHC3-213ENST00000491258 ZNF503-AS2A6NEH8 195 aa8.05□□□□□ -1.12
PHC3-213ENST00000491258 TREHO43280 583 aa8.05□□□□□ -1.12
PHC3-213ENST00000491258 EOMESO95936 686 aa8.05□□□□□ -1.12
PHC3-213ENST00000491258 LRRC14Q15048 493 aa8.05□□□□□ -1.12
PHC3-213ENST00000491258 FBLN7Q53RD9 439 aa8.05□□□□□ -1.12
PHC3-213ENST00000491258 SPOCD1Q6ZMY3 1216 aa8.05□□□□□ -1.12
PHC3-213ENST00000491258 ARMCX6Q7L4S7 300 aa8.05□□□□□ -1.12
PHC3-213ENST00000491258 FOXQ1Q9C009 403 aa8.05□□□□□ -1.12
PHC3-213ENST00000491258 MAPK8P45983 427 aa8.04□□□□□ -1.12
PHC3-213ENST00000491258 RING1Q06587 406 aa8.04□□□□□ -1.12
PHC3-213ENST00000491258 KCT2Q8NC54 265 aa8.04□□□□□ -1.12
PHC3-213ENST00000491258 LIN37Q96GY3 246 aaPredicted RBP8.04□□□□□ -1.12
PHC3-213ENST00000491258 AFMP43652 599 aa8.03□□□□□ -1.12
PHC3-213ENST00000491258 RASIP1Q5U651 963 aa8.03□□□□□ -1.12
PHC3-213ENST00000491258 FYB2Q5VWT5 728 aa8.03□□□□□ -1.12
PHC3-213ENST00000491258 ZNF507Q8TCN5 953 aa8.03□□□□□ -1.12
PHC3-213ENST00000491258 CARS2Q9HA77 564 aaKnown RBP8.03□□□□□ -1.12
PHC3-213ENST00000491258 PPM1HQ9ULR3 514 aa8.03□□□□□ -1.12
PHC3-213ENST00000491258 MAPK8IP1Q9UQF2 711 aa8.03□□□□□ -1.12
PHC3-213ENST00000491258 PRAMEF27A3QJZ7 478 aa8.02□□□□□ -1.13
PHC3-213ENST00000491258 FAM155AB1AL88 458 aaPredicted RBP8.02□□□□□ -1.13
PHC3-213ENST00000491258 LRIG2O94898 1065 aa8.02□□□□□ -1.13
PHC3-213ENST00000491258 CDKAL1Q5VV42 579 aa8.02□□□□□ -1.13
PHC3-213ENST00000491258 HSPA12BQ96MM6 686 aa8.02□□□□□ -1.13
PHC3-213ENST00000491258 OSBPL7Q9BZF2 842 aa8.02□□□□□ -1.13
PHC3-213ENST00000491258 SRCIN1Q9C0H9 1055 aa8.02□□□□□ -1.13
PHC3-213ENST00000491258 LMCD1Q9NZU5 365 aa8.02□□□□□ -1.13
PHC3-213ENST00000491258 TPX2Q9ULW0 747 aaKnown RBP8.02□□□□□ -1.13
PHC3-213ENST00000491258 RAP1GAPP47736 663 aa8.01□□□□□ -1.13
PHC3-213ENST00000491258 MPZL3Q6UWV2 235 aa8.01□□□□□ -1.13
PHC3-213ENST00000491258 KIRREL1Q96J84 757 aa8.01□□□□□ -1.13
PHC3-213ENST00000491258 SETDB2Q96T68 719 aa8.01□□□□□ -1.13
PHC3-213ENST00000491258 PRR33A8MZF0 331 aa8□□□□□ -1.13
PHC3-213ENST00000491258 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8□□□□□ -1.13
PHC3-213ENST00000491258 SLITRK5O94991 958 aa8□□□□□ -1.13
PHC3-213ENST00000491258 CELA3AP09093 270 aa8□□□□□ -1.13
PHC3-213ENST00000491258 INPP5AQ14642 412 aa8□□□□□ -1.13
PHC3-213ENST00000491258 PCNX4Q63HM2 1172 aa8□□□□□ -1.13
PHC3-213ENST00000491258 LRFN4Q6PJG9 635 aa8□□□□□ -1.13
PHC3-213ENST00000491258 CYFIP1Q7L576 1253 aa8□□□□□ -1.13
PHC3-213ENST00000491258 BHLHE22Q8NFJ8 381 aaPredicted RBP8□□□□□ -1.13
PHC3-213ENST00000491258 FBF1Q8TES7 1133 aa8□□□□□ -1.13
PHC3-213ENST00000491258 MIPEPQ99797 713 aa8□□□□□ -1.13
PHC3-213ENST00000491258 ATP13A1Q9HD20 1204 aa8□□□□□ -1.13
PHC3-213ENST00000491258 CYP8B1Q9UNU6 501 aa8□□□□□ -1.13
PHC3-213ENST00000491258 H3BS24 57 aa7.99□□□□□ -1.13
PHC3-213ENST00000491258 GLI1P08151 1106 aa7.99□□□□□ -1.13
PHC3-213ENST00000491258 SFRP5Q5T4F7 317 aa7.99□□□□□ -1.13
PHC3-213ENST00000491258 PRR23BQ6ZRT6 265 aa7.99□□□□□ -1.13
PHC3-213ENST00000491258 MFSD4AQ8N468 514 aa7.99□□□□□ -1.13
PHC3-213ENST00000491258 FBRSQ9HAH7 460 aa7.99□□□□□ -1.13
PHC3-213ENST00000491258 SEMA3GQ9NS98 782 aa7.99□□□□□ -1.13
PHC3-213ENST00000491258 GNEQ9Y223 722 aaKnown RBP7.99□□□□□ -1.13
PHC3-213ENST00000491258 KRTAP9-7A8MTY7 169 aa7.98□□□□□ -1.13
PHC3-213ENST00000491258 FGD1P98174 961 aa7.98□□□□□ -1.13
PHC3-213ENST00000491258 TMEM67Q5HYA8 995 aa7.98□□□□□ -1.13
PHC3-213ENST00000491258 SCARA3Q6AZY7 606 aa7.98□□□□□ -1.13
PHC3-213ENST00000491258 PLPPR2Q96GM1 343 aa7.98□□□□□ -1.13
PHC3-213ENST00000491258 TOX2Q96NM4 488 aa7.98□□□□□ -1.13
PHC3-213ENST00000491258 PPP1R16BQ96T49 567 aa7.98□□□□□ -1.13
PHC3-213ENST00000491258 GIPC1O14908 333 aa7.97□□□□□ -1.13
PHC3-213ENST00000491258 ETF1P62495 437 aaKnown RBP7.97□□□□□ -1.13
PHC3-213ENST00000491258 PTPN11Q06124 597 aaPredicted RBP7.97□□□□□ -1.13
PHC3-213ENST00000491258 ALG1LQ6GMV1 187 aa7.97□□□□□ -1.13
PHC3-213ENST00000491258 SYDE1Q6ZW31 735 aaPredicted RBP7.97□□□□□ -1.13
PHC3-213ENST00000491258 HDXQ7Z353 690 aa7.97□□□□□ -1.13
PHC3-213ENST00000491258 NPAS4Q8IUM7 802 aa7.97□□□□□ -1.13
PHC3-213ENST00000491258 WWC3Q9ULE0 1092 aa7.97□□□□□ -1.13
PHC3-213ENST00000491258 CNTNAP4Q9C0A0 1308 aa7.97□□□□□ -1.13
PHC3-213ENST00000491258 CBX7O95931 251 aa7.96□□□□□ -1.14
PHC3-213ENST00000491258 ATP2B2Q01814 1243 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms