RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 FCGRTP55899 365 aa10.56□□□□□ -0.72
HPS4-215ENST00000491142 TCP10Q12799 353 aa10.56□□□□□ -0.72
HPS4-215ENST00000491142 CAVIN4Q5BKX8 364 aa10.56□□□□□ -0.72
HPS4-215ENST00000491142 SLAIN1Q8ND83 568 aa10.56□□□□□ -0.72
HPS4-215ENST00000491142 FAM151AQ8WW52 585 aa10.56□□□□□ -0.72
HPS4-215ENST00000491142 MROH5Q6ZUA9 1318 aa10.56□□□□□ -0.72
HPS4-215ENST00000491142 RPAP1Q9BWH6 1393 aaPredicted RBP10.55□□□□□ -0.72
HPS4-215ENST00000491142 ADCY3O60266 1144 aa10.55□□□□□ -0.72
HPS4-215ENST00000491142 FLT3LGP49771 235 aa10.55□□□□□ -0.72
HPS4-215ENST00000491142 METTL24Q5JXM2 366 aa10.55□□□□□ -0.72
HPS4-215ENST00000491142 SLC4A10Q6U841 1118 aa10.55□□□□□ -0.72
HPS4-215ENST00000491142 HHIPL2Q6UWX4 724 aa10.55□□□□□ -0.72
HPS4-215ENST00000491142 DEFB118Q96PH6 123 aa10.55□□□□□ -0.72
HPS4-215ENST00000491142 PARK7Q99497 189 aaKnown RBP10.55□□□□□ -0.72
HPS4-215ENST00000491142 PCDHB8Q9UN66 801 aa10.55□□□□□ -0.72
HPS4-215ENST00000491142 ALDH1L1O75891 902 aa10.54□□□□□ -0.72
HPS4-215ENST00000491142 PDE8BO95263 885 aa10.54□□□□□ -0.72
HPS4-215ENST00000491142 INHAP05111 366 aa10.54□□□□□ -0.72
HPS4-215ENST00000491142 NBPF7P0C2Y1 421 aaPredicted RBP10.54□□□□□ -0.72
HPS4-215ENST00000491142 NFIAQ12857 509 aa10.54□□□□□ -0.72
HPS4-215ENST00000491142 NOL9Q5SY16 702 aaKnown RBP10.54□□□□□ -0.72
HPS4-215ENST00000491142 CDC42EP5Q6NZY7 148 aa10.54□□□□□ -0.72
HPS4-215ENST00000491142 CHD1LQ86WJ1 897 aa10.54□□□□□ -0.72
HPS4-215ENST00000491142 VGLL2Q8N8G2 317 aa10.54□□□□□ -0.72
HPS4-215ENST00000491142 PAWRQ96IZ0 340 aaKnown RBP10.54□□□□□ -0.72
HPS4-215ENST00000491142 BICC1Q9H694 974 aaKnown RBP10.54□□□□□ -0.72
HPS4-215ENST00000491142 SUGT1Q9Y2Z0 365 aa10.54□□□□□ -0.72
HPS4-215ENST00000491142 CXCL11O14625 94 aa10.53□□□□□ -0.72
HPS4-215ENST00000491142 DIXDC1Q155Q3 683 aa10.53□□□□□ -0.72
HPS4-215ENST00000491142 ZFPM1Q8IX07 1006 aa10.53□□□□□ -0.72
HPS4-215ENST00000491142 SIRT2Q8IXJ6 389 aa10.53□□□□□ -0.72
HPS4-215ENST00000491142 KLHDC4Q8TBB5 520 aa10.53□□□□□ -0.72
HPS4-215ENST00000491142 DIS3LQ8TF46 1054 aaKnown RBP10.53□□□□□ -0.72
HPS4-215ENST00000491142 SRCIN1Q9C0H9 1055 aa10.53□□□□□ -0.72
HPS4-215ENST00000491142 PAK6Q9NQU5 681 aaPredicted RBP10.53□□□□□ -0.72
HPS4-215ENST00000491142 FAM198AQ9UFP1 575 aa10.53□□□□□ -0.72
HPS4-215ENST00000491142 DAGLAQ9Y4D2 1042 aa10.53□□□□□ -0.72
HPS4-215ENST00000491142 ZHX2Q9Y6X8 837 aa10.53□□□□□ -0.72
HPS4-215ENST00000491142 MAST3O60307 1309 aa10.53□□□□□ -0.72
HPS4-215ENST00000491142 LAMA2P24043 3122 aaKnown RBP10.52□□□□□ -0.72
HPS4-215ENST00000491142 A0A0G2JLL6 359 aaPredicted RBP10.52□□□□□ -0.73
HPS4-215ENST00000491142 PHF20L1A8MW92 1017 aa10.52□□□□□ -0.73
HPS4-215ENST00000491142 TNPO2O14787 897 aaKnown RBP10.52□□□□□ -0.73
HPS4-215ENST00000491142 CHRM1P11229 460 aaPredicted RBP10.52□□□□□ -0.73
HPS4-215ENST00000491142 FGFR2P21802 821 aa10.52□□□□□ -0.73
HPS4-215ENST00000491142 RABL6Q3YEC7 729 aaPredicted RBP10.52□□□□□ -0.73
HPS4-215ENST00000491142 GADL1Q6ZQY3 521 aa10.52□□□□□ -0.73
HPS4-215ENST00000491142 Q7L0L9 218 aa10.52□□□□□ -0.73
HPS4-215ENST00000491142 PRRT2Q7Z6L0 340 aaPredicted RBP10.52□□□□□ -0.73
HPS4-215ENST00000491142 RPAP2Q8IXW5 612 aaPredicted RBP10.52□□□□□ -0.73
HPS4-215ENST00000491142 ANKRD44Q8N8A2 993 aa10.52□□□□□ -0.73
HPS4-215ENST00000491142 PXYLP1Q8TE99 480 aa10.52□□□□□ -0.73
HPS4-215ENST00000491142 GDF15Q99988 308 aa10.52□□□□□ -0.73
HPS4-215ENST00000491142 CRISPLD2Q9H0B8 497 aa10.52□□□□□ -0.73
HPS4-215ENST00000491142 TAOK2Q9UL54 1235 aa10.52□□□□□ -0.73
HPS4-215ENST00000491142 CIZ1Q9ULV3 898 aaPredicted RBP10.52□□□□□ -0.73
HPS4-215ENST00000491142 SEC24BO95487 1268 aa10.51□□□□□ -0.73
HPS4-215ENST00000491142 SLURP2P0DP57 97 aa10.51□□□□□ -0.73
HPS4-215ENST00000491142 PTPRAP18433 802 aa10.51□□□□□ -0.73
HPS4-215ENST00000491142 IRF5Q13568 498 aa10.51□□□□□ -0.73
HPS4-215ENST00000491142 FASTKD5Q7L8L6 764 aaKnown RBP10.51□□□□□ -0.73
HPS4-215ENST00000491142 NECAB2Q7Z6G3 386 aa10.51□□□□□ -0.73
HPS4-215ENST00000491142 C7orf61Q8IZ16 206 aa10.51□□□□□ -0.73
HPS4-215ENST00000491142 DEFB123Q8N688 67 aa10.51□□□□□ -0.73
HPS4-215ENST00000491142 TBC1D32Q96NH3 1257 aa10.51□□□□□ -0.73
HPS4-215ENST00000491142 DCTPP1Q9H773 170 aa10.51□□□□□ -0.73
HPS4-215ENST00000491142 UPF2Q9HAU5 1272 aaKnown RBP10.51□□□□□ -0.73
HPS4-215ENST00000491142 USP40Q9NVE5 1235 aa10.51□□□□□ -0.73
HPS4-215ENST00000491142 ZMYND8Q9ULU4 1186 aaPredicted RBP10.51□□□□□ -0.73
HPS4-215ENST00000491142 AFG3L2Q9Y4W6 797 aa10.51□□□□□ -0.73
HPS4-215ENST00000491142 UTYO14607 1347 aa10.51□□□□□ -0.73
HPS4-215ENST00000491142 MGAMO43451 1857 aa10.51□□□□□ -0.73
HPS4-215ENST00000491142 IFIT1P09914 478 aaKnown RBP10.5□□□□□ -0.73
HPS4-215ENST00000491142 PRDX5P30044 214 aa10.5□□□□□ -0.73
HPS4-215ENST00000491142 BMP8BP34820 402 aa10.5□□□□□ -0.73
HPS4-215ENST00000491142 PUM3Q15397 648 aaKnown RBP10.5□□□□□ -0.73
HPS4-215ENST00000491142 BMP2KLQ5H9B9 411 aa10.5□□□□□ -0.73
HPS4-215ENST00000491142 SCYL3Q8IZE3 742 aa10.5□□□□□ -0.73
HPS4-215ENST00000491142 WDR66Q8TBY9 1149 aa10.5□□□□□ -0.73
HPS4-215ENST00000491142 C1orf115Q9H7X2 142 aa10.5□□□□□ -0.73
HPS4-215ENST00000491142 VCANP13611 3396 aa10.5□□□□□ -0.73
HPS4-215ENST00000491142 CUL9Q8IWT3 2517 aa10.5□□□□□ -0.73
HPS4-215ENST00000491142 ATRNL1Q5VV63 1379 aa10.5□□□□□ -0.73
HPS4-215ENST00000491142 EYSQ5T1H1 3165 aa10.49□□□□□ -0.73
HPS4-215ENST00000491142 SYN1P17600 705 aa10.49□□□□□ -0.73
HPS4-215ENST00000491142 CAPN2P17655 700 aa10.49□□□□□ -0.73
HPS4-215ENST00000491142 GPR153Q6NV75 609 aa10.49□□□□□ -0.73
HPS4-215ENST00000491142 CEP85Q6P2H3 762 aa10.49□□□□□ -0.73
HPS4-215ENST00000491142 SH3BP5LQ7L8J4 393 aa10.49□□□□□ -0.73
HPS4-215ENST00000491142 CCDC84Q86UT8 332 aaPredicted RBP10.49□□□□□ -0.73
HPS4-215ENST00000491142 ANKRD13CQ8N6S4 541 aa10.49□□□□□ -0.73
HPS4-215ENST00000491142 SMCR8Q8TEV9 937 aaPredicted RBP10.49□□□□□ -0.73
HPS4-215ENST00000491142 LNPKQ9C0E8 428 aa10.49□□□□□ -0.73
HPS4-215ENST00000491142 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.49□□□□□ -0.73
HPS4-215ENST00000491142 PICK1Q9NRD5 415 aa10.49□□□□□ -0.73
HPS4-215ENST00000491142 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.49□□□□□ -0.73
HPS4-215ENST00000491142 SLC45A1Q9Y2W3 748 aa10.49□□□□□ -0.73
HPS4-215ENST00000491142 AK9Q5TCS8 1911 aa10.48□□□□□ -0.73
HPS4-215ENST00000491142 ALPK3Q96L96 1907 aa10.48□□□□□ -0.73
HPS4-215ENST00000491142 TRIM75PA6NK02 468 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms