RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 FLT4P35916 1363 aa12.67□□□□□ -0.38
CRNKL1-204ENST00000490910 N4BP1O75113 896 aaKnown RBP12.67□□□□□ -0.38
CRNKL1-204ENST00000490910 SASH3O75995 380 aa12.67□□□□□ -0.38
CRNKL1-204ENST00000490910 RUFY4Q6ZNE9 571 aa12.67□□□□□ -0.38
CRNKL1-204ENST00000490910 IQCA1Q86XH1 822 aa12.67□□□□□ -0.38
CRNKL1-204ENST00000490910 ENOX1Q8TC92 643 aaKnown RBP12.67□□□□□ -0.38
CRNKL1-204ENST00000490910 DSCC1Q9BVC3 393 aa12.67□□□□□ -0.38
CRNKL1-204ENST00000490910 SLC24A3Q9HC58 644 aa12.67□□□□□ -0.38
CRNKL1-204ENST00000490910 NLRP2Q9NX02 1062 aa12.67□□□□□ -0.38
CRNKL1-204ENST00000490910 MTMR7Q9Y216 660 aa12.67□□□□□ -0.38
CRNKL1-204ENST00000490910 GGCXP38435 758 aa12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 UBA7P41226 1012 aa12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 FAM212AQ96EL1 285 aa12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 CCDC85AQ96PX6 553 aaPredicted RBP12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 SELENOSQ9BQE4 189 aa12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 IRX2Q9BZI1 471 aaPredicted RBP12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 LRRC7Q96NW7 1537 aa12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 CFAP65Q6ZU64 1925 aaKnown RBP12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 ATP5J2-PTCD1G3V325 749 aa12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 PTCD1O75127 700 aaKnown RBP12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 LACTBP83111 547 aaPredicted RBP12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 RBBP5Q15291 538 aaKnown RBP12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 ARHGEF25Q86VW2 580 aa12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 DPF2Q92785 391 aa12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 SUCLG2Q96I99 432 aa12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 MYO5CQ9NQX4 1742 aa12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 NCKAP5LQ9HCH0 1330 aa12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 MAP3K4Q9Y6R4 1608 aa12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 PPP1R7Q15435 360 aa12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 DIS3L2Q8IYB7 885 aaKnown RBP12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 UBLCP1Q8WVY7 318 aaPredicted RBP12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 SWAP70Q9UH65 585 aa12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 STAT6P42226 847 aa12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 TBC1D8BQ0IIM8 1120 aa12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 CCDC40Q4G0X9 1142 aa12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 BEND3Q5T5X7 828 aa12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 MMRN2Q9H8L6 949 aa12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 DNAJC5BQ9UF47 199 aa12.66□□□□□ -0.38
CRNKL1-204ENST00000490910 ARHGEF10O15013 1369 aa12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 KIF4AO95239 1232 aa12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 ERCC3P19447 782 aa12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 ERCC5P28715 1186 aaPredicted RBP12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 HNRNPH1P31943 449 aaKnown RBP12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 APBA1Q02410 837 aa12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 PAK1Q13153 545 aa12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 AMOTQ4VCS5 1084 aa12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 FBXO31Q5XUX0 539 aaPredicted RBP12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 LRRC31Q6UY01 552 aa12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 REXO1L1PQ8IX06 675 aa12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 SAMSN1Q9NSI8 373 aaKnown RBP12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 ANGEL1Q9UNK9 670 aaKnown RBP12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 ADGRG1Q9Y653 693 aa12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 ASXL2Q76L83 1435 aa12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 PLEKHG2Q9H7P9 1386 aa12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 HOXB7P09629 217 aa12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 PDCLQ13371 301 aa12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 ZKSCAN8Q15776 578 aaPredicted RBP12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 LMBR1LQ6UX01 489 aa12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 PHKBQ93100 1093 aa12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 LRRC45Q96CN5 670 aa12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 SELENOOQ9BVL4 669 aa12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 SUGCTQ9HAC7 445 aa12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 FAM184BQ9ULE4 1060 aa12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 PNPLA6Q8IY17 1366 aa12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 PPP6R2O75170 966 aa12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 NLRP5P59047 1200 aa12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 BEND6Q5SZJ8 279 aaPredicted RBP12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 ANKRD13DQ6ZTN6 518 aa12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 CABP5Q9NP86 173 aa12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 MAPK8IP1Q9UQF2 711 aa12.65□□□□□ -0.38
CRNKL1-204ENST00000490910 IQGAP1P46940 1657 aa12.65□□□□□ -0.39
CRNKL1-204ENST00000490910 MPHOSPH10O00566 681 aaKnown RBP12.64□□□□□ -0.39
CRNKL1-204ENST00000490910 EPHB4P54760 987 aa12.64□□□□□ -0.39
CRNKL1-204ENST00000490910 SF3B2Q13435 895 aaKnown RBP12.64□□□□□ -0.39
CRNKL1-204ENST00000490910 WTAPQ15007 396 aa12.64□□□□□ -0.39
CRNKL1-204ENST00000490910 CCDC93Q567U6 631 aa12.64□□□□□ -0.39
CRNKL1-204ENST00000490910 METTL24Q5JXM2 366 aa12.64□□□□□ -0.39
CRNKL1-204ENST00000490910 ZNF526Q8TF50 670 aaPredicted RBP12.64□□□□□ -0.39
CRNKL1-204ENST00000490910 COG1Q8WTW3 980 aa12.64□□□□□ -0.39
CRNKL1-204ENST00000490910 TBC1D31Q96DN5 1066 aa12.64□□□□□ -0.39
CRNKL1-204ENST00000490910 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.64□□□□□ -0.39
CRNKL1-204ENST00000490910 TLDC2A0PJX2 215 aa12.64□□□□□ -0.39
CRNKL1-204ENST00000490910 GKAP1Q5VSY0 366 aaPredicted RBP12.64□□□□□ -0.39
CRNKL1-204ENST00000490910 CCDC155Q8N6L0 562 aa12.64□□□□□ -0.39
CRNKL1-204ENST00000490910 TRIM58Q8NG06 486 aa12.64□□□□□ -0.39
CRNKL1-204ENST00000490910 VIPAS39Q9H9C1 493 aa12.64□□□□□ -0.39
CRNKL1-204ENST00000490910 ACTR5Q9H9F9 607 aaPredicted RBP12.64□□□□□ -0.39
CRNKL1-204ENST00000490910 ELF1P32519 619 aa12.64□□□□□ -0.39
CRNKL1-204ENST00000490910 GUCY2FP51841 1108 aa12.64□□□□□ -0.39
CRNKL1-204ENST00000490910 TTF1Q15361 905 aaPredicted RBP12.64□□□□□ -0.39
CRNKL1-204ENST00000490910 MFSD6Q6ZSS7 791 aa12.64□□□□□ -0.39
CRNKL1-204ENST00000490910 XAGE3Q8WTP9 111 aa12.64□□□□□ -0.39
CRNKL1-204ENST00000490910 DONSONQ9NYP3 566 aa12.64□□□□□ -0.39
CRNKL1-204ENST00000490910 IL15P40933 162 aaPredicted RBP12.63□□□□□ -0.39
CRNKL1-204ENST00000490910 SATB1Q01826 763 aa12.63□□□□□ -0.39
CRNKL1-204ENST00000490910 CFAP221Q4G0U5 840 aa12.63□□□□□ -0.39
CRNKL1-204ENST00000490910 SUGP1Q8IWZ8 645 aaKnown RBP12.63□□□□□ -0.39
CRNKL1-204ENST00000490910 TSG101Q99816 390 aa12.63□□□□□ -0.39
CRNKL1-204ENST00000490910 ARHGEF40Q8TER5 1519 aa12.63□□□□□ -0.39
CRNKL1-204ENST00000490910 CLTCL1P53675 1640 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms