RNA–Protein interactions for RNA: ENST00000490895.5

IMP4-216, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-216ENST00000490895 PI4KBQ9UBF8 816 aa18.73■□□□□ 0.59
IMP4-216ENST00000490895 PTCH2Q9Y6C5 1203 aa18.73■□□□□ 0.59
IMP4-216ENST00000490895 MYO5AQ9Y4I1 1855 aaKnown RBP18.73■□□□□ 0.59
IMP4-216ENST00000490895 FLT1P17948 1338 aa18.73■□□□□ 0.59
IMP4-216ENST00000490895 IDH1O75874 414 aaKnown RBP18.72■□□□□ 0.59
IMP4-216ENST00000490895 CYP7A1P22680 504 aa18.72■□□□□ 0.59
IMP4-216ENST00000490895 CAP2P40123 477 aa18.72■□□□□ 0.59
IMP4-216ENST00000490895 RRP1BQ14684 758 aaKnown RBP18.72■□□□□ 0.59
IMP4-216ENST00000490895 GADL1Q6ZQY3 521 aa18.72■□□□□ 0.59
IMP4-216ENST00000490895 CCDC84Q86UT8 332 aaPredicted RBP18.72■□□□□ 0.59
IMP4-216ENST00000490895 MAPKAPK5Q8IW41 473 aa18.72■□□□□ 0.59
IMP4-216ENST00000490895 KIF1BPQ96EK5 621 aa18.72■□□□□ 0.59
IMP4-216ENST00000490895 CHMP4BQ9H444 224 aaKnown RBP18.72■□□□□ 0.59
IMP4-216ENST00000490895 ANTXR1Q9H6X2 564 aa18.72■□□□□ 0.59
IMP4-216ENST00000490895 SLC45A1Q9Y2W3 748 aa18.72■□□□□ 0.59
IMP4-216ENST00000490895 NDUFB9Q9Y6M9 179 aa18.72■□□□□ 0.59
IMP4-216ENST00000490895 PHIPQ8WWQ0 1821 aa18.72■□□□□ 0.59
IMP4-216ENST00000490895 KIAA0100Q14667 2235 aaKnown RBP18.72■□□□□ 0.59
IMP4-216ENST00000490895 TRIM75PA6NK02 468 aa18.71■□□□□ 0.59
IMP4-216ENST00000490895 CYP2C8P10632 490 aa18.71■□□□□ 0.59
IMP4-216ENST00000490895 BCRP11274 1271 aa18.71■□□□□ 0.59
IMP4-216ENST00000490895 CTGFP29279 349 aa18.71■□□□□ 0.59
IMP4-216ENST00000490895 DYNLL1P63167 89 aaKnown RBP18.71■□□□□ 0.59
IMP4-216ENST00000490895 TMED8Q6PL24 325 aaPredicted RBP18.71■□□□□ 0.59
IMP4-216ENST00000490895 METTL16Q86W50 562 aaKnown RBP18.71■□□□□ 0.59
IMP4-216ENST00000490895 ZNF333Q96JL9 665 aa18.71■□□□□ 0.59
IMP4-216ENST00000490895 POTEFA5A3E0 1075 aa18.7■□□□□ 0.58
IMP4-216ENST00000490895 PSMC4P43686 418 aa18.7■□□□□ 0.58
IMP4-216ENST00000490895 PRMT2P55345 433 aa18.7■□□□□ 0.58
IMP4-216ENST00000490895 PDE3AQ14432 1141 aa18.7■□□□□ 0.58
IMP4-216ENST00000490895 SLC9C1Q4G0N8 1177 aa18.7■□□□□ 0.58
IMP4-216ENST00000490895 C20orf194Q5TEA3 1177 aa18.7■□□□□ 0.58
IMP4-216ENST00000490895 CERS3Q8IU89 383 aa18.7■□□□□ 0.58
IMP4-216ENST00000490895 CLASRPQ8N2M8 674 aaKnown RBP18.7■□□□□ 0.58
IMP4-216ENST00000490895 MAGEB6Q8N7X4 407 aa18.7■□□□□ 0.58
IMP4-216ENST00000490895 TRIM47Q96LD4 638 aa18.7■□□□□ 0.58
IMP4-216ENST00000490895 TBC1D2Q9BYX2 928 aa18.7■□□□□ 0.58
IMP4-216ENST00000490895 PTPRFP10586 1907 aa18.7■□□□□ 0.58
IMP4-216ENST00000490895 ZSWIM8A7E2V4 1837 aa18.7■□□□□ 0.58
IMP4-216ENST00000490895 APBB1O00213 710 aa18.69■□□□□ 0.58
IMP4-216ENST00000490895 RAB11FIP3O75154 756 aa18.69■□□□□ 0.58
IMP4-216ENST00000490895 MAP3K12Q12852 859 aa18.69■□□□□ 0.58
IMP4-216ENST00000490895 SPP2Q13103 211 aa18.69■□□□□ 0.58
IMP4-216ENST00000490895 NBPF11Q86T75 865 aa18.69■□□□□ 0.58
IMP4-216ENST00000490895 FOXP4Q8IVH2 680 aaPredicted RBP18.69■□□□□ 0.58
IMP4-216ENST00000490895 MIGA1Q8NAN2 632 aa18.69■□□□□ 0.58
IMP4-216ENST00000490895 ZNF280CQ8ND82 737 aa18.69■□□□□ 0.58
IMP4-216ENST00000490895 DNAJC18Q9H819 358 aa18.69■□□□□ 0.58
IMP4-216ENST00000490895 PALD1Q9ULE6 856 aa18.69■□□□□ 0.58
IMP4-216ENST00000490895 AGTPBP1Q9UPW5 1226 aa18.69■□□□□ 0.58
IMP4-216ENST00000490895 SIPA1L1O43166 1804 aa18.68■□□□□ 0.58
IMP4-216ENST00000490895 USP17L5A8MUK1 530 aa18.68■□□□□ 0.58
IMP4-216ENST00000490895 SRRDQ9UH36 339 aa18.68■□□□□ 0.58
IMP4-216ENST00000490895 CDK5RAP2Q96SN8 1893 aa18.68■□□□□ 0.58
IMP4-216ENST00000490895 FOCADQ5VW36 1801 aa18.67■□□□□ 0.58
IMP4-216ENST00000490895 MKI67P46013 3256 aaKnown RBP18.67■□□□□ 0.58
IMP4-216ENST00000490895 ECM2O94769 699 aaPredicted RBP18.67■□□□□ 0.58
IMP4-216ENST00000490895 OSBPP22059 807 aa18.67■□□□□ 0.58
IMP4-216ENST00000490895 PROCA1Q8NCQ7 364 aaPredicted RBP18.67■□□□□ 0.58
IMP4-216ENST00000490895 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.67■□□□□ 0.58
IMP4-216ENST00000490895 SAP30BPQ9UHR5 308 aaKnown RBP18.67■□□□□ 0.58
IMP4-216ENST00000490895 BRCA2P51587 3418 aa18.67■□□□□ 0.58
IMP4-216ENST00000490895 FMNL1O95466 1100 aaPredicted RBP18.66■□□□□ 0.58
IMP4-216ENST00000490895 IFIT2P09913 472 aaKnown RBP18.66■□□□□ 0.58
IMP4-216ENST00000490895 HOXD10P28358 340 aa18.66■□□□□ 0.58
IMP4-216ENST00000490895 JAG1P78504 1218 aa18.66■□□□□ 0.58
IMP4-216ENST00000490895 TTF1Q15361 905 aaPredicted RBP18.66■□□□□ 0.58
IMP4-216ENST00000490895 TREML2Q5T2D2 321 aa18.66■□□□□ 0.58
IMP4-216ENST00000490895 CRACR2BQ8N4Y2 399 aaPredicted RBP18.66■□□□□ 0.58
IMP4-216ENST00000490895 WDR18Q9BV38 432 aa18.66■□□□□ 0.58
IMP4-216ENST00000490895 RBBP6Q7Z6E9 1792 aaKnown RBP18.65■□□□□ 0.58
IMP4-216ENST00000490895 HLA-DOAP06340 250 aa18.65■□□□□ 0.58
IMP4-216ENST00000490895 ASNSP08243 561 aa18.65■□□□□ 0.58
IMP4-216ENST00000490895 HMGCS2P54868 508 aa18.65■□□□□ 0.58
IMP4-216ENST00000490895 SH3D19Q5HYK7 790 aa18.65■□□□□ 0.58
IMP4-216ENST00000490895 SMCR8Q8TEV9 937 aaPredicted RBP18.65■□□□□ 0.58
IMP4-216ENST00000490895 SH3TC2Q8TF17 1288 aa18.65■□□□□ 0.58
IMP4-216ENST00000490895 RIOK1Q9BRS2 568 aaKnown RBP18.65■□□□□ 0.58
IMP4-216ENST00000490895 TMEM106CQ9BVX2 250 aa18.65■□□□□ 0.58
IMP4-216ENST00000490895 TRIM34Q9BYJ4 488 aa18.65■□□□□ 0.58
IMP4-216ENST00000490895 AS3MTQ9HBK9 375 aa18.65■□□□□ 0.58
IMP4-216ENST00000490895 GINM1Q9NU53 330 aa18.65■□□□□ 0.58
IMP4-216ENST00000490895 PDE6AP16499 860 aa18.64■□□□□ 0.57
IMP4-216ENST00000490895 EN2P19622 333 aaPredicted RBP18.64■□□□□ 0.57
IMP4-216ENST00000490895 USP5P45974 858 aa18.64■□□□□ 0.57
IMP4-216ENST00000490895 FCGRTP55899 365 aa18.64■□□□□ 0.57
IMP4-216ENST00000490895 PNMA3Q9UL41 463 aa18.64■□□□□ 0.57
IMP4-216ENST00000490895 ATAD5Q96QE3 1844 aa18.64■□□□□ 0.57
IMP4-216ENST00000490895 GOLIM4O00461 696 aa18.63■□□□□ 0.57
IMP4-216ENST00000490895 BACE1P56817 501 aa18.63■□□□□ 0.57
IMP4-216ENST00000490895 SHROOM1Q2M3G4 852 aaPredicted RBP18.63■□□□□ 0.57
IMP4-216ENST00000490895 SLC9C2Q5TAH2 1124 aa18.63■□□□□ 0.57
IMP4-216ENST00000490895 ZBTB21Q9ULJ3 1066 aa18.63■□□□□ 0.57
IMP4-216ENST00000490895 MYPNQ86TC9 1320 aa18.63■□□□□ 0.57
IMP4-216ENST00000490895 LOC285556D6RIA3 1793 aa18.63■□□□□ 0.57
IMP4-216ENST00000490895 GDF11O95390 407 aa18.62■□□□□ 0.57
IMP4-216ENST00000490895 PRKCZQ05513 592 aa18.62■□□□□ 0.57
IMP4-216ENST00000490895 PABPC4Q13310 644 aaKnown RBP eCLIP18.62■□□□□ 0.57
IMP4-216ENST00000490895 SLC4A8Q2Y0W8 1093 aa18.62■□□□□ 0.57
IMP4-216ENST00000490895 RAET1EQ8TD07 263 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms