RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 SAP30BPQ9UHR5 308 aaKnown RBP11.79□□□□□ -0.52
HDAC9-225ENST00000490851 SLX4Q8IY92 1834 aa11.79□□□□□ -0.52
HDAC9-225ENST00000490851 TIAM2Q8IVF5 1701 aa11.79□□□□□ -0.52
HDAC9-225ENST00000490851 TCHHQ07283 1943 aa11.78□□□□□ -0.52
HDAC9-225ENST00000490851 MYH2Q9UKX2 1941 aa11.78□□□□□ -0.52
HDAC9-225ENST00000490851 MROH7-TTC4A0A0A0MT08 1334 aa11.78□□□□□ -0.52
HDAC9-225ENST00000490851 WDR19Q8NEZ3 1342 aa11.78□□□□□ -0.52
HDAC9-225ENST00000490851 KIF20AO95235 890 aa11.78□□□□□ -0.52
HDAC9-225ENST00000490851 METAP2P50579 478 aaKnown RBP eCLIP11.78□□□□□ -0.52
HDAC9-225ENST00000490851 DNM1Q05193 864 aaKnown RBP11.78□□□□□ -0.52
HDAC9-225ENST00000490851 STYK1Q6J9G0 422 aa11.78□□□□□ -0.52
HDAC9-225ENST00000490851 MAPKAPK5Q8IW41 473 aa11.78□□□□□ -0.52
HDAC9-225ENST00000490851 IGDCC4Q8TDY8 1250 aa11.78□□□□□ -0.52
HDAC9-225ENST00000490851 TGFBRAP1Q8WUH2 860 aa11.78□□□□□ -0.52
HDAC9-225ENST00000490851 TMEM87BQ96K49 555 aa11.78□□□□□ -0.52
HDAC9-225ENST00000490851 COA1Q9GZY4 146 aa11.78□□□□□ -0.52
HDAC9-225ENST00000490851 YY1AP1Q9H869 796 aa11.78□□□□□ -0.52
HDAC9-225ENST00000490851 KCNQ5Q9NR82 932 aa11.78□□□□□ -0.52
HDAC9-225ENST00000490851 SH3BP1Q9Y3L3 701 aa11.78□□□□□ -0.52
HDAC9-225ENST00000490851 CCDC69A6NI79 296 aa11.78□□□□□ -0.52
HDAC9-225ENST00000490851 ZBTB7AO95365 584 aa11.78□□□□□ -0.52
HDAC9-225ENST00000490851 BAG3O95817 575 aa11.78□□□□□ -0.52
HDAC9-225ENST00000490851 APOA5Q6Q788 366 aa11.78□□□□□ -0.52
HDAC9-225ENST00000490851 FBXL16Q8N461 479 aa11.78□□□□□ -0.52
HDAC9-225ENST00000490851 SMARCC2Q8TAQ2 1214 aa11.78□□□□□ -0.52
HDAC9-225ENST00000490851 LLPHQ9BRT6 129 aaKnown RBP11.78□□□□□ -0.52
HDAC9-225ENST00000490851 UBAC1Q9BSL1 405 aa11.78□□□□□ -0.52
HDAC9-225ENST00000490851 ERICH2A1L162 156 aa11.77□□□□□ -0.52
HDAC9-225ENST00000490851 C21orf2O43822 256 aa11.77□□□□□ -0.52
HDAC9-225ENST00000490851 LDHCP07864 332 aa11.77□□□□□ -0.52
HDAC9-225ENST00000490851 ADD1P35611 737 aaKnown RBP11.77□□□□□ -0.52
HDAC9-225ENST00000490851 EVCP57679 992 aa11.77□□□□□ -0.52
HDAC9-225ENST00000490851 WTAPQ15007 396 aa11.77□□□□□ -0.52
HDAC9-225ENST00000490851 SART3Q15020 963 aaKnown RBP11.77□□□□□ -0.52
HDAC9-225ENST00000490851 SKOR2Q2VWA4 1001 aaPredicted RBP11.77□□□□□ -0.52
HDAC9-225ENST00000490851 ESR2Q92731 530 aa11.77□□□□□ -0.52
HDAC9-225ENST00000490851 RTFDC1Q9BY42 306 aaPredicted RBP11.77□□□□□ -0.52
HDAC9-225ENST00000490851 ATP8A2Q9NTI2 1148 aa11.77□□□□□ -0.52
HDAC9-225ENST00000490851 ZBTB43O43298 467 aa11.77□□□□□ -0.53
HDAC9-225ENST00000490851 SCNN1DP51172 638 aa11.77□□□□□ -0.53
HDAC9-225ENST00000490851 DMTNQ08495 405 aa11.77□□□□□ -0.53
HDAC9-225ENST00000490851 FAM47AQ5JRC9 791 aa11.77□□□□□ -0.53
HDAC9-225ENST00000490851 CAVIN1Q6NZI2 390 aaKnown RBP11.77□□□□□ -0.53
HDAC9-225ENST00000490851 USP48Q86UV5 1035 aa11.77□□□□□ -0.53
HDAC9-225ENST00000490851 TEX11Q8IYF3 940 aa11.77□□□□□ -0.53
HDAC9-225ENST00000490851 FAM177A1Q8N128 213 aaPredicted RBP11.77□□□□□ -0.53
HDAC9-225ENST00000490851 CERS5Q8N5B7 392 aa11.77□□□□□ -0.53
HDAC9-225ENST00000490851 TBC1D22AQ8WUA7 517 aa11.77□□□□□ -0.53
HDAC9-225ENST00000490851 CNKSR1Q969H4 720 aa11.77□□□□□ -0.53
HDAC9-225ENST00000490851 EYA3Q99504 573 aa11.77□□□□□ -0.53
HDAC9-225ENST00000490851 ANAPC4Q9UJX5 808 aa11.77□□□□□ -0.53
HDAC9-225ENST00000490851 ATP6V1DQ9Y5K8 247 aa11.77□□□□□ -0.53
HDAC9-225ENST00000490851 SLC12A7Q9Y666 1083 aa11.77□□□□□ -0.53
HDAC9-225ENST00000490851 GOLGA8AA7E2F4 631 aa11.76□□□□□ -0.53
HDAC9-225ENST00000490851 GADD45BO75293 160 aaPredicted RBP11.76□□□□□ -0.53
HDAC9-225ENST00000490851 CDC27P30260 824 aa11.76□□□□□ -0.53
HDAC9-225ENST00000490851 HMGN5P82970 282 aaKnown RBP11.76□□□□□ -0.53
HDAC9-225ENST00000490851 AOC3Q16853 763 aa11.76□□□□□ -0.53
HDAC9-225ENST00000490851 OTUD7BQ6GQQ9 843 aa11.76□□□□□ -0.53
HDAC9-225ENST00000490851 GIMAP6Q6P9H5 292 aa11.76□□□□□ -0.53
HDAC9-225ENST00000490851 GPT2Q8TD30 523 aa11.76□□□□□ -0.53
HDAC9-225ENST00000490851 DYNLL2Q96FJ2 89 aa11.76□□□□□ -0.53
HDAC9-225ENST00000490851 RBM27Q9P2N5 1060 aaKnown RBP11.76□□□□□ -0.53
HDAC9-225ENST00000490851 ARPP21Q9UBL0 812 aaPredicted RBP11.76□□□□□ -0.53
HDAC9-225ENST00000490851 TNKSO95271 1327 aa11.76□□□□□ -0.53
HDAC9-225ENST00000490851 DHX16O60231 1041 aaKnown RBP11.76□□□□□ -0.53
HDAC9-225ENST00000490851 FDPSP14324 419 aaKnown RBP11.76□□□□□ -0.53
HDAC9-225ENST00000490851 NUP133Q8WUM0 1156 aa11.76□□□□□ -0.53
HDAC9-225ENST00000490851 PHKBQ93100 1093 aa11.76□□□□□ -0.53
HDAC9-225ENST00000490851 GJB4Q9NTQ9 266 aa11.76□□□□□ -0.53
HDAC9-225ENST00000490851 ORC3Q9UBD5 711 aaPredicted RBP11.76□□□□□ -0.53
HDAC9-225ENST00000490851 TTF2Q9UNY4 1162 aaKnown RBP11.76□□□□□ -0.53
HDAC9-225ENST00000490851 ATF5Q9Y2D1 282 aaPredicted RBP11.76□□□□□ -0.53
HDAC9-225ENST00000490851 FAM205AQ6ZU69 1335 aa11.75□□□□□ -0.53
HDAC9-225ENST00000490851 NMT2O60551 498 aa11.75□□□□□ -0.53
HDAC9-225ENST00000490851 CLCN1P35523 988 aa11.75□□□□□ -0.53
HDAC9-225ENST00000490851 SYNE3Q6ZMZ3 975 aa11.75□□□□□ -0.53
HDAC9-225ENST00000490851 CCDC82Q8N4S0 544 aa11.75□□□□□ -0.53
HDAC9-225ENST00000490851 PPP1R1BQ9UD71 204 aaPredicted RBP11.75□□□□□ -0.53
HDAC9-225ENST00000490851 QSER1Q2KHR3 1735 aa11.75□□□□□ -0.53
HDAC9-225ENST00000490851 POLR3DP05423 398 aaPredicted RBP11.75□□□□□ -0.53
HDAC9-225ENST00000490851 PICALMQ13492 652 aa11.75□□□□□ -0.53
HDAC9-225ENST00000490851 KLHL40Q2TBA0 621 aa11.75□□□□□ -0.53
HDAC9-225ENST00000490851 CMTR1Q8N1G2 835 aaKnown RBP11.75□□□□□ -0.53
HDAC9-225ENST00000490851 CHMP4CQ96CF2 233 aa11.75□□□□□ -0.53
HDAC9-225ENST00000490851 TFIP11Q9UBB9 837 aaKnown RBP11.75□□□□□ -0.53
HDAC9-225ENST00000490851 KIF3AQ9Y496 699 aa11.75□□□□□ -0.53
HDAC9-225ENST00000490851 DAGLAQ9Y4D2 1042 aa11.75□□□□□ -0.53
HDAC9-225ENST00000490851 UTRNP46939 3433 aa11.74□□□□□ -0.53
HDAC9-225ENST00000490851 ZBTB22O15209 634 aa11.74□□□□□ -0.53
HDAC9-225ENST00000490851 ECE2O60344 883 aa11.74□□□□□ -0.53
HDAC9-225ENST00000490851 SLC3A2P08195 630 aaKnown RBP11.74□□□□□ -0.53
HDAC9-225ENST00000490851 DPEP1P16444 411 aa11.74□□□□□ -0.53
HDAC9-225ENST00000490851 LIFRP42702 1097 aa11.74□□□□□ -0.53
HDAC9-225ENST00000490851 SGMS1Q86VZ5 419 aa11.74□□□□□ -0.53
HDAC9-225ENST00000490851 ENAHQ8N8S7 591 aaPredicted RBP11.74□□□□□ -0.53
HDAC9-225ENST00000490851 SLC44A5Q8NCS7 719 aa11.74□□□□□ -0.53
HDAC9-225ENST00000490851 AIFM3Q96NN9 605 aa11.74□□□□□ -0.53
HDAC9-225ENST00000490851 ZSCAN10Q96SZ4 725 aaPredicted RBP11.74□□□□□ -0.53
HDAC9-225ENST00000490851 GEMIN8Q9NWZ8 242 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms