RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 TRIM27P14373 513 aa9.14□□□□□ -0.95
PRPF4B-208ENST00000490653 ADORA1P30542 326 aa9.14□□□□□ -0.95
PRPF4B-208ENST00000490653 TIMM10P62072 90 aa9.14□□□□□ -0.95
PRPF4B-208ENST00000490653 INTS3Q68E01 1043 aaKnown RBP9.14□□□□□ -0.95
PRPF4B-208ENST00000490653 SCUBE3Q8IX30 993 aa9.14□□□□□ -0.95
PRPF4B-208ENST00000490653 ZNF70Q9UC06 446 aaPredicted RBP9.14□□□□□ -0.95
PRPF4B-208ENST00000490653 ANGEL1Q9UNK9 670 aaKnown RBP9.14□□□□□ -0.95
PRPF4B-208ENST00000490653 SSC5DA1L4H1 1573 aa9.13□□□□□ -0.95
PRPF4B-208ENST00000490653 TCP10L2B9ZVM9 353 aa9.13□□□□□ -0.95
PRPF4B-208ENST00000490653 USP2O75604 605 aaPredicted RBP9.13□□□□□ -0.95
PRPF4B-208ENST00000490653 OATP04181 439 aa9.13□□□□□ -0.95
PRPF4B-208ENST00000490653 CRKP46108 304 aa9.13□□□□□ -0.95
PRPF4B-208ENST00000490653 TM4SF4P48230 202 aa9.13□□□□□ -0.95
PRPF4B-208ENST00000490653 CACNB3P54284 484 aa9.13□□□□□ -0.95
PRPF4B-208ENST00000490653 RASA3Q14644 834 aa9.13□□□□□ -0.95
PRPF4B-208ENST00000490653 LDLRAD1Q5T700 205 aa9.13□□□□□ -0.95
PRPF4B-208ENST00000490653 APOBEC3FQ8IUX4 373 aaKnown RBP9.13□□□□□ -0.95
PRPF4B-208ENST00000490653 DZIP1LQ8IYY4 767 aaKnown RBP9.13□□□□□ -0.95
PRPF4B-208ENST00000490653 ARHGAP45Q92619 1136 aa9.13□□□□□ -0.95
PRPF4B-208ENST00000490653 CLMNQ96JQ2 1002 aa9.13□□□□□ -0.95
PRPF4B-208ENST00000490653 PAPPA2Q9BXP8 1791 aa9.13□□□□□ -0.95
PRPF4B-208ENST00000490653 PNMA6EA0A0J9YXQ4 647 aa9.12□□□□□ -0.95
PRPF4B-208ENST00000490653 GPR25O00155 361 aa9.12□□□□□ -0.95
PRPF4B-208ENST00000490653 FRAT2O75474 233 aaPredicted RBP9.12□□□□□ -0.95
PRPF4B-208ENST00000490653 IFIT1P09914 478 aaKnown RBP9.12□□□□□ -0.95
PRPF4B-208ENST00000490653 GJA5P36382 358 aa9.12□□□□□ -0.95
PRPF4B-208ENST00000490653 PHKA1P46020 1223 aa9.12□□□□□ -0.95
PRPF4B-208ENST00000490653 FKBP1BP68106 108 aa9.12□□□□□ -0.95
PRPF4B-208ENST00000490653 PUM3Q15397 648 aaKnown RBP9.12□□□□□ -0.95
PRPF4B-208ENST00000490653 CAVIN4Q5BKX8 364 aa9.12□□□□□ -0.95
PRPF4B-208ENST00000490653 VPS37DQ86XT2 251 aa9.12□□□□□ -0.95
PRPF4B-208ENST00000490653 TMEM57Q8N5G2 664 aa9.12□□□□□ -0.95
PRPF4B-208ENST00000490653 CEP126Q9P2H0 1117 aa9.12□□□□□ -0.95
PRPF4B-208ENST00000490653 RLBP1P12271 317 aa9.11□□□□□ -0.95
PRPF4B-208ENST00000490653 MMP14P50281 582 aa9.11□□□□□ -0.95
PRPF4B-208ENST00000490653 TFCP2Q12800 502 aa9.11□□□□□ -0.95
PRPF4B-208ENST00000490653 ATP2B3Q16720 1220 aa9.11□□□□□ -0.95
PRPF4B-208ENST00000490653 APOBEC3HQ6NTF7 200 aaKnown RBP9.11□□□□□ -0.95
PRPF4B-208ENST00000490653 ATF7IPQ6VMQ6 1270 aa9.11□□□□□ -0.95
PRPF4B-208ENST00000490653 ARMC9Q7Z3E5 817 aa9.11□□□□□ -0.95
PRPF4B-208ENST00000490653 LPIN2Q92539 896 aa9.11□□□□□ -0.95
PRPF4B-208ENST00000490653 TEPSINQ96N21 525 aa9.11□□□□□ -0.95
PRPF4B-208ENST00000490653 CFHR5Q9BXR6 569 aa9.11□□□□□ -0.95
PRPF4B-208ENST00000490653 TMEM39BQ9GZU3 492 aa9.11□□□□□ -0.95
PRPF4B-208ENST00000490653 C1orf115Q9H7X2 142 aa9.11□□□□□ -0.95
PRPF4B-208ENST00000490653 COPRSQ9NQ92 184 aa9.11□□□□□ -0.95
PRPF4B-208ENST00000490653 SERPINA10Q9UK55 444 aa9.11□□□□□ -0.95
PRPF4B-208ENST00000490653 COL1A1P02452 1464 aaPredicted RBP9.1□□□□□ -0.95
PRPF4B-208ENST00000490653 SZT2Q5T011 3432 aa9.1□□□□□ -0.95
PRPF4B-208ENST00000490653 IGF2BP3O00425 579 aaKnown RBP eCLIP9.1□□□□□ -0.95
PRPF4B-208ENST00000490653 SRGAP3O43295 1099 aa9.1□□□□□ -0.95
PRPF4B-208ENST00000490653 CIAO1O76071 339 aa9.1□□□□□ -0.95
PRPF4B-208ENST00000490653 SLC5A1P13866 664 aa9.1□□□□□ -0.95
PRPF4B-208ENST00000490653 NF2P35240 595 aa9.1□□□□□ -0.95
PRPF4B-208ENST00000490653 PUS10Q3MIT2 529 aaKnown RBP9.1□□□□□ -0.95
PRPF4B-208ENST00000490653 NOM1Q5C9Z4 860 aaKnown RBP9.1□□□□□ -0.95
PRPF4B-208ENST00000490653 METTL3Q86U44 580 aaKnown RBP9.1□□□□□ -0.95
PRPF4B-208ENST00000490653 SLC10A4Q96EP9 437 aa9.1□□□□□ -0.95
PRPF4B-208ENST00000490653 PKD2L1Q9P0L9 805 aa9.1□□□□□ -0.95
PRPF4B-208ENST00000490653 AKAP11Q9UKA4 1901 aa9.09□□□□□ -0.95
PRPF4B-208ENST00000490653 IPO8O15397 1037 aaKnown RBP9.09□□□□□ -0.95
PRPF4B-208ENST00000490653 MYO1BO43795 1136 aa9.09□□□□□ -0.95
PRPF4B-208ENST00000490653 SLURP2P0DP57 97 aa9.09□□□□□ -0.95
PRPF4B-208ENST00000490653 PRDX5P30044 214 aa9.09□□□□□ -0.95
PRPF4B-208ENST00000490653 IL15P40933 162 aaPredicted RBP9.09□□□□□ -0.95
PRPF4B-208ENST00000490653 HIC1Q14526 733 aa9.09□□□□□ -0.95
PRPF4B-208ENST00000490653 DIXDC1Q155Q3 683 aa9.09□□□□□ -0.95
PRPF4B-208ENST00000490653 MAP3K11Q16584 847 aa9.09□□□□□ -0.95
PRPF4B-208ENST00000490653 HABP4Q5JVS0 413 aaKnown RBP9.09□□□□□ -0.95
PRPF4B-208ENST00000490653 ZKSCAN2Q63HK3 967 aa9.09□□□□□ -0.95
PRPF4B-208ENST00000490653 CCDC102BQ68D86 513 aa9.09□□□□□ -0.95
PRPF4B-208ENST00000490653 FBXO46Q6PJ61 603 aaPredicted RBP9.09□□□□□ -0.95
PRPF4B-208ENST00000490653 ZFPM1Q8IX07 1006 aa9.09□□□□□ -0.95
PRPF4B-208ENST00000490653 SPSB2Q99619 263 aa9.09□□□□□ -0.95
PRPF4B-208ENST00000490653 AAASQ9NRG9 546 aa9.09□□□□□ -0.95
PRPF4B-208ENST00000490653 KIF16BQ96L93 1317 aa9.08□□□□□ -0.96
PRPF4B-208ENST00000490653 ECM29Q5VYK3 1845 aa9.08□□□□□ -0.96
PRPF4B-208ENST00000490653 RANBP2P49792 3224 aaKnown RBP9.08□□□□□ -0.96
PRPF4B-208ENST00000490653 SEMA3EO15041 775 aa9.08□□□□□ -0.96
PRPF4B-208ENST00000490653 ST8SIA5O15466 376 aa9.08□□□□□ -0.96
PRPF4B-208ENST00000490653 GNAI2P04899 355 aa9.08□□□□□ -0.96
PRPF4B-208ENST00000490653 GNAI3P08754 354 aa9.08□□□□□ -0.96
PRPF4B-208ENST00000490653 HDLBPQ00341 1268 aaKnown RBP9.08□□□□□ -0.96
PRPF4B-208ENST00000490653 MTX1Q13505 466 aa9.08□□□□□ -0.96
PRPF4B-208ENST00000490653 SUPT20HL1Q3ZLR7 823 aa9.08□□□□□ -0.96
PRPF4B-208ENST00000490653 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.08□□□□□ -0.96
PRPF4B-208ENST00000490653 TBC1D22AQ8WUA7 517 aa9.08□□□□□ -0.96
PRPF4B-208ENST00000490653 XAGE2Q96GT9 111 aa9.08□□□□□ -0.96
PRPF4B-208ENST00000490653 WNK4Q96J92 1243 aa9.08□□□□□ -0.96
PRPF4B-208ENST00000490653 ZDHHC15Q96MV8 337 aa9.08□□□□□ -0.96
PRPF4B-208ENST00000490653 PTPN18Q99952 460 aa9.08□□□□□ -0.96
PRPF4B-208ENST00000490653 MRIQ9BWK5 157 aa9.08□□□□□ -0.96
PRPF4B-208ENST00000490653 ELP3Q9H9T3 547 aa9.08□□□□□ -0.96
PRPF4B-208ENST00000490653 DAGLAQ9Y4D2 1042 aa9.08□□□□□ -0.96
PRPF4B-208ENST00000490653 A0A1B0GUL7 405 aa9.07□□□□□ -0.96
PRPF4B-208ENST00000490653 ZBTB7BO15156 539 aaPredicted RBP9.07□□□□□ -0.96
PRPF4B-208ENST00000490653 PPP1R12BO60237 982 aaPredicted RBP9.07□□□□□ -0.96
PRPF4B-208ENST00000490653 RPIAP49247 311 aa9.07□□□□□ -0.96
PRPF4B-208ENST00000490653 ATP8B2P98198 1209 aa9.07□□□□□ -0.96
PRPF4B-208ENST00000490653 NFIAQ12857 509 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms