RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 SH3TC2Q8TF17 1288 aa11.46□□□□□ -0.57
SRRM1-217ENST00000490543 CHMP4AQ9BY43 222 aa11.46□□□□□ -0.57
SRRM1-217ENST00000490543 TDRD3Q9H7E2 651 aaKnown RBP11.46□□□□□ -0.57
SRRM1-217ENST00000490543 OTOFQ9HC10 1997 aa11.45□□□□□ -0.58
SRRM1-217ENST00000490543 TCP10L2B9ZVM9 353 aa11.45□□□□□ -0.58
SRRM1-217ENST00000490543 PLIN1O60240 522 aa11.45□□□□□ -0.58
SRRM1-217ENST00000490543 VGLL4Q14135 290 aa11.45□□□□□ -0.58
SRRM1-217ENST00000490543 PLA2G2CQ5R387 149 aa11.45□□□□□ -0.58
SRRM1-217ENST00000490543 LIAT1Q6ZQX7 453 aa11.45□□□□□ -0.58
SRRM1-217ENST00000490543 ZNF594Q96JF6 807 aaPredicted RBP11.45□□□□□ -0.58
SRRM1-217ENST00000490543 TMEM39BQ9GZU3 492 aa11.45□□□□□ -0.58
SRRM1-217ENST00000490543 ZFYVE28Q9HCC9 887 aa11.45□□□□□ -0.58
SRRM1-217ENST00000490543 SZT2Q5T011 3432 aa11.45□□□□□ -0.58
SRRM1-217ENST00000490543 GTF2A2P52657 109 aa11.44□□□□□ -0.58
SRRM1-217ENST00000490543 USP46P62068 366 aa11.44□□□□□ -0.58
SRRM1-217ENST00000490543 FLIIQ13045 1269 aa11.44□□□□□ -0.58
SRRM1-217ENST00000490543 IFIT5Q13325 482 aaKnown RBP11.44□□□□□ -0.58
SRRM1-217ENST00000490543 GRIK5Q16478 980 aa11.44□□□□□ -0.58
SRRM1-217ENST00000490543 AMHR2Q16671 573 aa11.44□□□□□ -0.58
SRRM1-217ENST00000490543 TWISTNBQ3B726 338 aaPredicted RBP11.44□□□□□ -0.58
SRRM1-217ENST00000490543 EPHA10Q5JZY3 1008 aa11.44□□□□□ -0.58
SRRM1-217ENST00000490543 MFSD14BQ5SR56 506 aa11.44□□□□□ -0.58
SRRM1-217ENST00000490543 Q6ZNB5 142 aa11.44□□□□□ -0.58
SRRM1-217ENST00000490543 DZIP1LQ8IYY4 767 aaKnown RBP11.44□□□□□ -0.58
SRRM1-217ENST00000490543 LINS1Q8NG48 757 aa11.44□□□□□ -0.58
SRRM1-217ENST00000490543 DNAAF4Q8WXU2 420 aa11.44□□□□□ -0.58
SRRM1-217ENST00000490543 HLA-CQ95604 372 aa11.44□□□□□ -0.58
SRRM1-217ENST00000490543 TTF2Q9UNY4 1162 aaKnown RBP11.44□□□□□ -0.58
SRRM1-217ENST00000490543 CHMP3Q9Y3E7 222 aa11.44□□□□□ -0.58
SRRM1-217ENST00000490543 ZSWIM8A7E2V4 1837 aa11.44□□□□□ -0.58
SRRM1-217ENST00000490543 FAM205AQ6ZU69 1335 aa11.43□□□□□ -0.58
SRRM1-217ENST00000490543 FKBP5Q13451 457 aaPredicted RBP11.43□□□□□ -0.58
SRRM1-217ENST00000490543 TNFAIP1Q13829 316 aa11.43□□□□□ -0.58
SRRM1-217ENST00000490543 ARHGEF6Q15052 776 aa11.43□□□□□ -0.58
SRRM1-217ENST00000490543 MTFR1Q15390 333 aa11.43□□□□□ -0.58
SRRM1-217ENST00000490543 LMBR1LQ6UX01 489 aa11.43□□□□□ -0.58
SRRM1-217ENST00000490543 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.43□□□□□ -0.58
SRRM1-217ENST00000490543 TDRD7Q8NHU6 1098 aaKnown RBP11.43□□□□□ -0.58
SRRM1-217ENST00000490543 MYH16Q9H6N6 1097 aa11.43□□□□□ -0.58
SRRM1-217ENST00000490543 PRDM9Q9NQV7 894 aa11.43□□□□□ -0.58
SRRM1-217ENST00000490543 SERPINA10Q9UK55 444 aa11.43□□□□□ -0.58
SRRM1-217ENST00000490543 BTBD19C9JJ37 291 aa11.42□□□□□ -0.58
SRRM1-217ENST00000490543 F6X3S4 739 aa11.42□□□□□ -0.58
SRRM1-217ENST00000490543 HOXA2O43364 376 aa11.42□□□□□ -0.58
SRRM1-217ENST00000490543 TLR2O60603 784 aa11.42□□□□□ -0.58
SRRM1-217ENST00000490543 CTGFP29279 349 aa11.42□□□□□ -0.58
SRRM1-217ENST00000490543 GYG1P46976 350 aa11.42□□□□□ -0.58
SRRM1-217ENST00000490543 CACNB3P54284 484 aa11.42□□□□□ -0.58
SRRM1-217ENST00000490543 LACTBP83111 547 aaPredicted RBP11.42□□□□□ -0.58
SRRM1-217ENST00000490543 LDHAL6AQ6ZMR3 332 aa11.42□□□□□ -0.58
SRRM1-217ENST00000490543 SHISA4Q96DD7 197 aa11.42□□□□□ -0.58
SRRM1-217ENST00000490543 FAM84BQ96KN1 310 aaPredicted RBP11.42□□□□□ -0.58
SRRM1-217ENST00000490543 PRKRIP1Q9H875 184 aaPredicted RBP11.42□□□□□ -0.58
SRRM1-217ENST00000490543 A0A1B0GUL6 1792 aa11.41□□□□□ -0.58
SRRM1-217ENST00000490543 RANBP2P49792 3224 aaKnown RBP11.41□□□□□ -0.58
SRRM1-217ENST00000490543 SPDYE5A6NIY4 337 aa11.41□□□□□ -0.58
SRRM1-217ENST00000490543 NRG2O14511 850 aaPredicted RBP11.41□□□□□ -0.58
SRRM1-217ENST00000490543 SSTR3P32745 418 aaPredicted RBP11.41□□□□□ -0.58
SRRM1-217ENST00000490543 CRKP46108 304 aa11.41□□□□□ -0.58
SRRM1-217ENST00000490543 Q3C1V9 767 aa11.41□□□□□ -0.58
SRRM1-217ENST00000490543 ZKSCAN4Q969J2 545 aaPredicted RBP11.41□□□□□ -0.58
SRRM1-217ENST00000490543 CSADQ9Y600 493 aa11.41□□□□□ -0.58
SRRM1-217ENST00000490543 SNCAIPQ9Y6H5 919 aa11.41□□□□□ -0.58
SRRM1-217ENST00000490543 CETPP11597 493 aa11.4□□□□□ -0.58
SRRM1-217ENST00000490543 HIBADHP31937 336 aaKnown RBP11.4□□□□□ -0.58
SRRM1-217ENST00000490543 MSS51Q4VC12 460 aa11.4□□□□□ -0.58
SRRM1-217ENST00000490543 DPF3Q92784 378 aa11.4□□□□□ -0.58
SRRM1-217ENST00000490543 PUS3Q9BZE2 481 aaKnown RBP11.4□□□□□ -0.58
SRRM1-217ENST00000490543 CNNM1Q9NRU3 951 aa11.4□□□□□ -0.58
SRRM1-217ENST00000490543 IQSEC3Q9UPP2 1182 aaPredicted RBP11.4□□□□□ -0.58
SRRM1-217ENST00000490543 FCF1Q9Y324 198 aaKnown RBP11.4□□□□□ -0.58
SRRM1-217ENST00000490543 TNNI2P48788 182 aa11.39□□□□□ -0.59
SRRM1-217ENST00000490543 KIF22Q14807 665 aa11.39□□□□□ -0.59
SRRM1-217ENST00000490543 CCDC57Q2TAC2 916 aa11.39□□□□□ -0.59
SRRM1-217ENST00000490543 TAF7LQ5H9L4 462 aa11.39□□□□□ -0.59
SRRM1-217ENST00000490543 BEND3Q5T5X7 828 aa11.39□□□□□ -0.59
SRRM1-217ENST00000490543 C17orf99Q6UX52 265 aa11.39□□□□□ -0.59
SRRM1-217ENST00000490543 TRIM67Q6ZTA4 783 aa11.39□□□□□ -0.59
SRRM1-217ENST00000490543 ZNF598Q86UK7 904 aaKnown RBP11.39□□□□□ -0.59
SRRM1-217ENST00000490543 ERO1BQ86YB8 467 aa11.39□□□□□ -0.59
SRRM1-217ENST00000490543 WWC1Q8IX03 1113 aa11.39□□□□□ -0.59
SRRM1-217ENST00000490543 TRIM47Q96LD4 638 aa11.39□□□□□ -0.59
SRRM1-217ENST00000490543 CPA4Q9UI42 421 aa11.39□□□□□ -0.59
SRRM1-217ENST00000490543 VAMP4O75379 141 aa11.38□□□□□ -0.59
SRRM1-217ENST00000490543 GUCA2AQ02747 115 aa11.38□□□□□ -0.59
SRRM1-217ENST00000490543 SNAPC2Q13487 334 aa11.38□□□□□ -0.59
SRRM1-217ENST00000490543 UBE4AQ14139 1066 aa11.38□□□□□ -0.59
SRRM1-217ENST00000490543 UBE2Q1Q7Z7E8 422 aa11.38□□□□□ -0.59
SRRM1-217ENST00000490543 WRNIP1Q96S55 665 aa11.38□□□□□ -0.59
SRRM1-217ENST00000490543 PRO3102Q9H379 93 aa11.38□□□□□ -0.59
SRRM1-217ENST00000490543 SRRDQ9UH36 339 aa11.38□□□□□ -0.59
SRRM1-217ENST00000490543 WDHD1O75717 1129 aaPredicted RBP11.37□□□□□ -0.59
SRRM1-217ENST00000490543 GNRH1P01148 92 aa11.37□□□□□ -0.59
SRRM1-217ENST00000490543 PSMC4P43686 418 aa11.37□□□□□ -0.59
SRRM1-217ENST00000490543 CHAF1AQ13111 956 aaPredicted RBP11.37□□□□□ -0.59
SRRM1-217ENST00000490543 PPIL2Q13356 520 aa11.37□□□□□ -0.59
SRRM1-217ENST00000490543 CCDC184Q52MB2 194 aa11.37□□□□□ -0.59
SRRM1-217ENST00000490543 ZNF697Q5TEC3 545 aa11.37□□□□□ -0.59
SRRM1-217ENST00000490543 MIGA2Q7L4E1 593 aa11.37□□□□□ -0.59
SRRM1-217ENST00000490543 FBXO33Q7Z6M2 555 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms