RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 PIH1D3Q9NQM4 214 aaKnown RBP18.79■□□□□ 0.6
PCCB-218ENST00000490504 ATP5JP18859 108 aa18.78■□□□□ 0.6
PCCB-218ENST00000490504 CRHR2Q13324 411 aa18.78■□□□□ 0.6
PCCB-218ENST00000490504 NAA16Q6N069 864 aaPredicted RBP18.78■□□□□ 0.6
PCCB-218ENST00000490504 PPIL2Q13356 520 aa18.78■□□□□ 0.6
PCCB-218ENST00000490504 NDUFB9Q9Y6M9 179 aa18.78■□□□□ 0.6
PCCB-218ENST00000490504 PHF20L1A8MW92 1017 aa18.77■□□□□ 0.6
PCCB-218ENST00000490504 MAP3K10Q02779 954 aa18.77■□□□□ 0.6
PCCB-218ENST00000490504 PPATQ06203 517 aa18.77■□□□□ 0.6
PCCB-218ENST00000490504 ADGRA1Q86SQ6 560 aa18.77■□□□□ 0.6
PCCB-218ENST00000490504 FAM43AQ8N2R8 423 aa18.77■□□□□ 0.6
PCCB-218ENST00000490504 SH3RF3Q8TEJ3 882 aaPredicted RBP18.77■□□□□ 0.6
PCCB-218ENST00000490504 BOLA2Q9H3K6 86 aa18.77■□□□□ 0.6
PCCB-218ENST00000490504 MYH2Q9UKX2 1941 aa18.76■□□□□ 0.59
PCCB-218ENST00000490504 NPM3O75607 178 aaKnown RBP18.76■□□□□ 0.59
PCCB-218ENST00000490504 CETPP11597 493 aa18.76■□□□□ 0.59
PCCB-218ENST00000490504 SLC4A3P48751 1232 aa18.76■□□□□ 0.59
PCCB-218ENST00000490504 SNAPC2Q13487 334 aa18.76■□□□□ 0.59
PCCB-218ENST00000490504 NOL9Q5SY16 702 aaKnown RBP18.76■□□□□ 0.59
PCCB-218ENST00000490504 KIF2CQ99661 725 aa18.76■□□□□ 0.59
PCCB-218ENST00000490504 AATFQ9NY61 560 aaKnown RBP eCLIP18.76■□□□□ 0.59
PCCB-218ENST00000490504 HIP1O00291 1037 aa18.75■□□□□ 0.59
PCCB-218ENST00000490504 EPB41L2O43491 1005 aaKnown RBP18.75■□□□□ 0.59
PCCB-218ENST00000490504 TEX11Q8IYF3 940 aa18.75■□□□□ 0.59
PCCB-218ENST00000490504 DIAPH3Q9NSV4 1193 aa18.75■□□□□ 0.59
PCCB-218ENST00000490504 BTBD19C9JJ37 291 aa18.74■□□□□ 0.59
PCCB-218ENST00000490504 TBC1D2Q9BYX2 928 aa18.74■□□□□ 0.59
PCCB-218ENST00000490504 OSBPL5Q9H0X9 879 aaPredicted RBP18.74■□□□□ 0.59
PCCB-218ENST00000490504 ANTXR1Q9H6X2 564 aa18.74■□□□□ 0.59
PCCB-218ENST00000490504 SGSM2O43147 1006 aa18.74■□□□□ 0.59
PCCB-218ENST00000490504 PPP4CP60510 307 aa18.74■□□□□ 0.59
PCCB-218ENST00000490504 TAF1CQ15572 869 aaPredicted RBP18.74■□□□□ 0.59
PCCB-218ENST00000490504 RUFY2Q8WXA3 655 aa18.74■□□□□ 0.59
PCCB-218ENST00000490504 NOL10Q9BSC4 688 aaKnown RBP18.74■□□□□ 0.59
PCCB-218ENST00000490504 KCNH4Q9UQ05 1017 aa18.74■□□□□ 0.59
PCCB-218ENST00000490504 IDH1O75874 414 aaKnown RBP18.73■□□□□ 0.59
PCCB-218ENST00000490504 BAG3O95817 575 aa18.73■□□□□ 0.59
PCCB-218ENST00000490504 PKN2Q16513 984 aaKnown RBP18.73■□□□□ 0.59
PCCB-218ENST00000490504 SNX21Q969T3 373 aa18.73■□□□□ 0.59
PCCB-218ENST00000490504 HAUS7Q99871 368 aa18.73■□□□□ 0.59
PCCB-218ENST00000490504 ANO2Q9NQ90 1003 aa18.73■□□□□ 0.59
PCCB-218ENST00000490504 HPS5Q9UPZ3 1129 aa18.73■□□□□ 0.59
PCCB-218ENST00000490504 FAM196BA6NMK8 535 aa18.72■□□□□ 0.59
PCCB-218ENST00000490504 CYP7A1P22680 504 aa18.72■□□□□ 0.59
PCCB-218ENST00000490504 MCCP23508 829 aa18.72■□□□□ 0.59
PCCB-218ENST00000490504 SCYL3Q8IZE3 742 aa18.72■□□□□ 0.59
PCCB-218ENST00000490504 ZFYVE28Q9HCC9 887 aa18.72■□□□□ 0.59
PCCB-218ENST00000490504 TBC1D12O60347 775 aa18.71■□□□□ 0.59
PCCB-218ENST00000490504 IGSF3O75054 1194 aa18.71■□□□□ 0.59
PCCB-218ENST00000490504 PTPRAP18433 802 aa18.71■□□□□ 0.59
PCCB-218ENST00000490504 DYNLL1P63167 89 aaKnown RBP18.71■□□□□ 0.59
PCCB-218ENST00000490504 CAP1Q01518 475 aa18.71■□□□□ 0.59
PCCB-218ENST00000490504 RABEP1Q15276 862 aa18.71■□□□□ 0.59
PCCB-218ENST00000490504 HSCBQ8IWL3 235 aa18.71■□□□□ 0.59
PCCB-218ENST00000490504 CD99L2Q8TCZ2 262 aa18.71■□□□□ 0.59
PCCB-218ENST00000490504 TGFBRAP1Q8WUH2 860 aa18.71■□□□□ 0.59
PCCB-218ENST00000490504 FSD1Q9BTV5 496 aa18.71■□□□□ 0.59
PCCB-218ENST00000490504 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.71■□□□□ 0.59
PCCB-218ENST00000490504 PICK1Q9NRD5 415 aa18.71■□□□□ 0.59
PCCB-218ENST00000490504 ZHX2Q9Y6X8 837 aa18.71■□□□□ 0.59
PCCB-218ENST00000490504 CTNND1O60716 968 aaKnown RBP18.71■□□□□ 0.58
PCCB-218ENST00000490504 PLCG2P16885 1265 aa18.71■□□□□ 0.58
PCCB-218ENST00000490504 SP3Q02447 781 aa18.71■□□□□ 0.58
PCCB-218ENST00000490504 MOGSQ13724 837 aa18.71■□□□□ 0.58
PCCB-218ENST00000490504 CWC27Q6UX04 472 aaKnown RBP18.71■□□□□ 0.58
PCCB-218ENST00000490504 OTOP1Q7RTM1 612 aa18.71■□□□□ 0.58
PCCB-218ENST00000490504 MAPKAPK5Q8IW41 473 aa18.71■□□□□ 0.58
PCCB-218ENST00000490504 MAGEB6Q8N7X4 407 aa18.71■□□□□ 0.58
PCCB-218ENST00000490504 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.71■□□□□ 0.58
PCCB-218ENST00000490504 IL25Q9H293 177 aa18.71■□□□□ 0.58
PCCB-218ENST00000490504 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.71■□□□□ 0.58
PCCB-218ENST00000490504 TRIM17Q9Y577 477 aa18.71■□□□□ 0.58
PCCB-218ENST00000490504 LAMB1P07942 1786 aa18.7■□□□□ 0.58
PCCB-218ENST00000490504 FBXO46Q6PJ61 603 aaPredicted RBP18.7■□□□□ 0.58
PCCB-218ENST00000490504 MIGA1Q8NAN2 632 aa18.7■□□□□ 0.58
PCCB-218ENST00000490504 ERO1AQ96HE7 468 aa18.7■□□□□ 0.58
PCCB-218ENST00000490504 ZCCHC17Q9NP64 241 aaKnown RBP18.7■□□□□ 0.58
PCCB-218ENST00000490504 RAD50Q92878 1312 aa18.69■□□□□ 0.58
PCCB-218ENST00000490504 CXCL11O14625 94 aa18.69■□□□□ 0.58
PCCB-218ENST00000490504 MAP3K12Q12852 859 aa18.69■□□□□ 0.58
PCCB-218ENST00000490504 ANKRD23Q86SG2 305 aa18.69■□□□□ 0.58
PCCB-218ENST00000490504 CCDC84Q86UT8 332 aaPredicted RBP18.69■□□□□ 0.58
PCCB-218ENST00000490504 DNAJC2Q99543 621 aaKnown RBP18.69■□□□□ 0.58
PCCB-218ENST00000490504 AFG3L2Q9Y4W6 797 aa18.69■□□□□ 0.58
PCCB-218ENST00000490504 COL2A1P02458 1487 aaPredicted RBP18.69■□□□□ 0.58
PCCB-218ENST00000490504 TLR2O60603 784 aa18.68■□□□□ 0.58
PCCB-218ENST00000490504 RRP1BQ14684 758 aaKnown RBP18.68■□□□□ 0.58
PCCB-218ENST00000490504 KIAA1211Q6ZU35 1233 aa18.68■□□□□ 0.58
PCCB-218ENST00000490504 TICAM2Q86XR7 235 aa18.68■□□□□ 0.58
PCCB-218ENST00000490504 FLT1P17948 1338 aa18.68■□□□□ 0.58
PCCB-218ENST00000490504 PDHXO00330 501 aa18.67■□□□□ 0.58
PCCB-218ENST00000490504 RGS19P49795 217 aa18.67■□□□□ 0.58
PCCB-218ENST00000490504 ANAPC15P60006 121 aa18.67■□□□□ 0.58
PCCB-218ENST00000490504 NMIQ13287 307 aaPredicted RBP18.67■□□□□ 0.58
PCCB-218ENST00000490504 LSG1Q9H089 658 aaKnown RBP18.67■□□□□ 0.58
PCCB-218ENST00000490504 PI4KBQ9UBF8 816 aa18.67■□□□□ 0.58
PCCB-218ENST00000490504 PALD1Q9ULE6 856 aa18.67■□□□□ 0.58
PCCB-218ENST00000490504 MYH7P12883 1935 aa18.67■□□□□ 0.58
PCCB-218ENST00000490504 SOX10P56693 466 aa18.67■□□□□ 0.58
PCCB-218ENST00000490504 GPAT2Q6NUI2 795 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms