RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 TFRCP02786 760 aaKnown RBP9.29□□□□□ -0.92
PDLIM1-203ENST00000490391 INHAP05111 366 aa9.29□□□□□ -0.92
PDLIM1-203ENST00000490391 BCRP11274 1271 aa9.29□□□□□ -0.92
PDLIM1-203ENST00000490391 ELNP15502 786 aa9.29□□□□□ -0.92
PDLIM1-203ENST00000490391 KRT24Q2M2I5 525 aa9.29□□□□□ -0.92
PDLIM1-203ENST00000490391 CTC1Q2NKJ3 1217 aa9.29□□□□□ -0.92
PDLIM1-203ENST00000490391 PLA2G2CQ5R387 149 aa9.29□□□□□ -0.92
PDLIM1-203ENST00000490391 MAFAQ8NHW3 353 aaPredicted RBP9.29□□□□□ -0.92
PDLIM1-203ENST00000490391 SYMPKQ92797 1274 aaKnown RBP9.29□□□□□ -0.92
PDLIM1-203ENST00000490391 CDX2Q99626 313 aaPredicted RBP9.29□□□□□ -0.92
PDLIM1-203ENST00000490391 DDX60LQ5H9U9 1706 aaKnown RBP9.28□□□□□ -0.92
PDLIM1-203ENST00000490391 ADCY3O60266 1144 aa9.28□□□□□ -0.92
PDLIM1-203ENST00000490391 PCCAP05165 728 aaPredicted RBP9.28□□□□□ -0.92
PDLIM1-203ENST00000490391 HSP90B1P14625 803 aaKnown RBP9.28□□□□□ -0.92
PDLIM1-203ENST00000490391 FOXC1Q12948 553 aa9.28□□□□□ -0.92
PDLIM1-203ENST00000490391 PPIL2Q13356 520 aa9.28□□□□□ -0.92
PDLIM1-203ENST00000490391 SNAPC2Q13487 334 aa9.28□□□□□ -0.92
PDLIM1-203ENST00000490391 ERO1BQ86YB8 467 aa9.28□□□□□ -0.92
PDLIM1-203ENST00000490391 PXYLP1Q8TE99 480 aa9.28□□□□□ -0.92
PDLIM1-203ENST00000490391 CD209Q9NNX6 404 aa9.28□□□□□ -0.92
PDLIM1-203ENST00000490391 BABAM1Q9NWV8 329 aa9.28□□□□□ -0.92
PDLIM1-203ENST00000490391 LEMD3Q9Y2U8 911 aa9.28□□□□□ -0.92
PDLIM1-203ENST00000490391 CSADQ9Y600 493 aa9.28□□□□□ -0.92
PDLIM1-203ENST00000490391 MYH3P11055 1940 aa9.28□□□□□ -0.92
PDLIM1-203ENST00000490391 REV3LO60673 3130 aa9.27□□□□□ -0.92
PDLIM1-203ENST00000490391 F8W031 263 aaPredicted RBP9.27□□□□□ -0.93
PDLIM1-203ENST00000490391 PPP2R1AP30153 589 aa9.27□□□□□ -0.93
PDLIM1-203ENST00000490391 FLT3LGP49771 235 aa9.27□□□□□ -0.93
PDLIM1-203ENST00000490391 SMCPP49901 116 aaPredicted RBP9.27□□□□□ -0.93
PDLIM1-203ENST00000490391 MOGSQ13724 837 aa9.27□□□□□ -0.93
PDLIM1-203ENST00000490391 TNFAIP1Q13829 316 aa9.27□□□□□ -0.93
PDLIM1-203ENST00000490391 ANKRD23Q86SG2 305 aa9.27□□□□□ -0.93
PDLIM1-203ENST00000490391 JARID2Q92833 1246 aaPredicted RBP9.27□□□□□ -0.93
PDLIM1-203ENST00000490391 CDC5LQ99459 802 aaKnown RBP9.27□□□□□ -0.93
PDLIM1-203ENST00000490391 TMEM39BQ9GZU3 492 aa9.27□□□□□ -0.93
PDLIM1-203ENST00000490391 TOR4AQ9NXH8 423 aa9.27□□□□□ -0.93
PDLIM1-203ENST00000490391 GRXCR2A6NFK2 248 aa9.26□□□□□ -0.93
PDLIM1-203ENST00000490391 PDHXO00330 501 aa9.26□□□□□ -0.93
PDLIM1-203ENST00000490391 CTSWP56202 376 aa9.26□□□□□ -0.93
PDLIM1-203ENST00000490391 FKBP1AP62942 108 aaKnown RBP9.26□□□□□ -0.93
PDLIM1-203ENST00000490391 IRF5Q13568 498 aa9.26□□□□□ -0.93
PDLIM1-203ENST00000490391 TTLL11Q8NHH1 800 aa9.26□□□□□ -0.93
PDLIM1-203ENST00000490391 ZKSCAN4Q969J2 545 aaPredicted RBP9.26□□□□□ -0.93
PDLIM1-203ENST00000490391 GREM2Q9H772 168 aa9.26□□□□□ -0.93
PDLIM1-203ENST00000490391 ZNF70Q9UC06 446 aaPredicted RBP9.26□□□□□ -0.93
PDLIM1-203ENST00000490391 CHD7Q9P2D1 2997 aa9.26□□□□□ -0.93
PDLIM1-203ENST00000490391 SYNGAP1Q96PV0 1343 aa9.26□□□□□ -0.93
PDLIM1-203ENST00000490391 TERTO14746 1132 aaKnown RBP9.25□□□□□ -0.93
PDLIM1-203ENST00000490391 ADH1BP00325 375 aa9.25□□□□□ -0.93
PDLIM1-203ENST00000490391 FCGRTP55899 365 aa9.25□□□□□ -0.93
PDLIM1-203ENST00000490391 HDGFL1Q5TGJ6 251 aa9.25□□□□□ -0.93
PDLIM1-203ENST00000490391 PADI6Q6TGC4 694 aa9.25□□□□□ -0.93
PDLIM1-203ENST00000490391 CCDC191Q8NCU4 936 aa9.25□□□□□ -0.93
PDLIM1-203ENST00000490391 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.25□□□□□ -0.93
PDLIM1-203ENST00000490391 DBF4Q9UBU7 674 aaPredicted RBP9.25□□□□□ -0.93
PDLIM1-203ENST00000490391 PFASO15067 1338 aa9.25□□□□□ -0.93
PDLIM1-203ENST00000490391 A0A1B0GUL6 1792 aa9.24□□□□□ -0.93
PDLIM1-203ENST00000490391 TMEM265A0A087WTH1 108 aa9.24□□□□□ -0.93
PDLIM1-203ENST00000490391 SNAP23O00161 211 aa9.24□□□□□ -0.93
PDLIM1-203ENST00000490391 ACTN4O43707 911 aaKnown RBP9.24□□□□□ -0.93
PDLIM1-203ENST00000490391 IL1R1P14778 569 aa9.24□□□□□ -0.93
PDLIM1-203ENST00000490391 MDM2Q00987 491 aaPredicted RBP9.24□□□□□ -0.93
PDLIM1-203ENST00000490391 PPATQ06203 517 aa9.24□□□□□ -0.93
PDLIM1-203ENST00000490391 MAP3K12Q12852 859 aa9.24□□□□□ -0.93
PDLIM1-203ENST00000490391 C15orf52Q6ZUT6 534 aaKnown RBP9.24□□□□□ -0.93
PDLIM1-203ENST00000490391 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.24□□□□□ -0.93
PDLIM1-203ENST00000490391 MYLIPQ8WY64 445 aa9.24□□□□□ -0.93
PDLIM1-203ENST00000490391 WRNIP1Q96S55 665 aa9.24□□□□□ -0.93
PDLIM1-203ENST00000490391 TTYH1Q9H313 450 aaPredicted RBP9.24□□□□□ -0.93
PDLIM1-203ENST00000490391 SEMA6BQ9H3T3 888 aa9.24□□□□□ -0.93
PDLIM1-203ENST00000490391 TDRD3Q9H7E2 651 aaKnown RBP9.24□□□□□ -0.93
PDLIM1-203ENST00000490391 HYPKQ9NX55 129 aa9.24□□□□□ -0.93
PDLIM1-203ENST00000490391 KCNH4Q9UQ05 1017 aa9.24□□□□□ -0.93
PDLIM1-203ENST00000490391 FAM181BA6NEQ2 426 aa9.23□□□□□ -0.93
PDLIM1-203ENST00000490391 TCP10L2B9ZVM9 353 aa9.23□□□□□ -0.93
PDLIM1-203ENST00000490391 HOXB7P09629 217 aa9.23□□□□□ -0.93
PDLIM1-203ENST00000490391 CYP2C8P10632 490 aa9.23□□□□□ -0.93
PDLIM1-203ENST00000490391 GPAT2Q6NUI2 795 aa9.23□□□□□ -0.93
PDLIM1-203ENST00000490391 USP38Q8NB14 1042 aa9.23□□□□□ -0.93
PDLIM1-203ENST00000490391 PARK7Q99497 189 aaKnown RBP9.23□□□□□ -0.93
PDLIM1-203ENST00000490391 MYD88Q99836 296 aa9.23□□□□□ -0.93
PDLIM1-203ENST00000490391 SLC6A16Q9GZN6 736 aa9.23□□□□□ -0.93
PDLIM1-203ENST00000490391 C11orf49Q9H6J7 331 aa9.23□□□□□ -0.93
PDLIM1-203ENST00000490391 CWC25Q9NXE8 425 aaPredicted RBP9.23□□□□□ -0.93
PDLIM1-203ENST00000490391 SERPINA10Q9UK55 444 aa9.23□□□□□ -0.93
PDLIM1-203ENST00000490391 JAG2Q9Y219 1238 aa9.23□□□□□ -0.93
PDLIM1-203ENST00000490391 CHL1O00533 1208 aa9.22□□□□□ -0.93
PDLIM1-203ENST00000490391 NEFMP07197 916 aa9.22□□□□□ -0.93
PDLIM1-203ENST00000490391 COL6A1P12109 1028 aa9.22□□□□□ -0.93
PDLIM1-203ENST00000490391 RBM5P52756 815 aaKnown RBP eCLIP9.22□□□□□ -0.93
PDLIM1-203ENST00000490391 RIC3Q7Z5B4 369 aa9.22□□□□□ -0.93
PDLIM1-203ENST00000490391 DZIP1LQ8IYY4 767 aaKnown RBP9.22□□□□□ -0.93
PDLIM1-203ENST00000490391 ANKRD2Q9GZV1 360 aa9.22□□□□□ -0.93
PDLIM1-203ENST00000490391 NPDC1Q9NQX5 325 aaPredicted RBP9.22□□□□□ -0.93
PDLIM1-203ENST00000490391 OGDHLQ9ULD0 1010 aa9.22□□□□□ -0.93
PDLIM1-203ENST00000490391 MYO9BQ13459 2157 aa9.22□□□□□ -0.93
PDLIM1-203ENST00000490391 TRANK1O15050 2925 aa9.21□□□□□ -0.93
PDLIM1-203ENST00000490391 INPP5BP32019 993 aa9.21□□□□□ -0.94
PDLIM1-203ENST00000490391 CYP4X1Q8N118 509 aa9.21□□□□□ -0.94
PDLIM1-203ENST00000490391 LTBP2Q14767 1821 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms