RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 TBC1D12O60347 775 aa17.29■□□□□ 0.36
SRGAP3-208ENST00000490348 AOC2O75106 756 aa17.29■□□□□ 0.36
SRGAP3-208ENST00000490348 PLCD1P51178 756 aa17.29■□□□□ 0.36
SRGAP3-208ENST00000490348 MAP3K9P80192 1104 aa17.29■□□□□ 0.36
SRGAP3-208ENST00000490348 NMIQ13287 307 aaPredicted RBP17.29■□□□□ 0.36
SRGAP3-208ENST00000490348 RRP1BQ14684 758 aaKnown RBP17.29■□□□□ 0.36
SRGAP3-208ENST00000490348 ANKRD13AQ8IZ07 590 aa17.29■□□□□ 0.36
SRGAP3-208ENST00000490348 ATP8A2Q9NTI2 1148 aa17.29■□□□□ 0.36
SRGAP3-208ENST00000490348 UNCXA6NJT0 531 aa17.28■□□□□ 0.36
SRGAP3-208ENST00000490348 CYP2D6P10635 497 aa17.28■□□□□ 0.36
SRGAP3-208ENST00000490348 CNKSR2Q8WXI2 1034 aa17.28■□□□□ 0.36
SRGAP3-208ENST00000490348 EPB41L4AQ9HCS5 686 aaPredicted RBP17.28■□□□□ 0.36
SRGAP3-208ENST00000490348 MCM9Q9NXL9 1143 aa17.28■□□□□ 0.36
SRGAP3-208ENST00000490348 SNCAIPQ9Y6H5 919 aa17.28■□□□□ 0.36
SRGAP3-208ENST00000490348 BAZ2AQ9UIF9 1905 aaKnown RBP17.28■□□□□ 0.36
SRGAP3-208ENST00000490348 THSD7BQ9C0I4 1608 aa17.28■□□□□ 0.36
SRGAP3-208ENST00000490348 GJA5P36382 358 aa17.28■□□□□ 0.36
SRGAP3-208ENST00000490348 ZNF589Q86UQ0 364 aaPredicted RBP17.28■□□□□ 0.36
SRGAP3-208ENST00000490348 ELP3Q9H9T3 547 aa17.28■□□□□ 0.36
SRGAP3-208ENST00000490348 HELLSQ9NRZ9 838 aa17.28■□□□□ 0.36
SRGAP3-208ENST00000490348 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.28■□□□□ 0.36
SRGAP3-208ENST00000490348 CYP2D7A0A087X1C5 515 aa17.27■□□□□ 0.35
SRGAP3-208ENST00000490348 ECE1P42892 770 aa17.27■□□□□ 0.35
SRGAP3-208ENST00000490348 VPS53Q5VIR6 699 aa17.27■□□□□ 0.35
SRGAP3-208ENST00000490348 CCDC102AQ96A19 550 aa17.27■□□□□ 0.35
SRGAP3-208ENST00000490348 IL25Q9H293 177 aa17.27■□□□□ 0.35
SRGAP3-208ENST00000490348 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.27■□□□□ 0.35
SRGAP3-208ENST00000490348 HERC5Q9UII4 1024 aaKnown RBP17.27■□□□□ 0.35
SRGAP3-208ENST00000490348 MKRN3Q13064 507 aaKnown RBP17.26■□□□□ 0.35
SRGAP3-208ENST00000490348 MCMDC2Q4G0Z9 681 aa17.26■□□□□ 0.35
SRGAP3-208ENST00000490348 CTR9Q6PD62 1173 aa17.26■□□□□ 0.35
SRGAP3-208ENST00000490348 JMYQ8N9B5 988 aa17.26■□□□□ 0.35
SRGAP3-208ENST00000490348 SLC10A4Q96EP9 437 aa17.26■□□□□ 0.35
SRGAP3-208ENST00000490348 EHD4Q9H223 541 aa17.26■□□□□ 0.35
SRGAP3-208ENST00000490348 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.26■□□□□ 0.35
SRGAP3-208ENST00000490348 USP17L12C9JPN9 530 aa17.25■□□□□ 0.35
SRGAP3-208ENST00000490348 USP17L21D6R901 530 aa17.25■□□□□ 0.35
SRGAP3-208ENST00000490348 HLA-DOAP06340 250 aa17.25■□□□□ 0.35
SRGAP3-208ENST00000490348 JAG1P78504 1218 aa17.25■□□□□ 0.35
SRGAP3-208ENST00000490348 GABPAQ06546 454 aa17.25■□□□□ 0.35
SRGAP3-208ENST00000490348 SHROOM1Q2M3G4 852 aaPredicted RBP17.25■□□□□ 0.35
SRGAP3-208ENST00000490348 NOL9Q5SY16 702 aaKnown RBP17.25■□□□□ 0.35
SRGAP3-208ENST00000490348 SPRYD7Q5W111 196 aa17.25■□□□□ 0.35
SRGAP3-208ENST00000490348 CWC27Q6UX04 472 aaKnown RBP17.25■□□□□ 0.35
SRGAP3-208ENST00000490348 FOXP4Q8IVH2 680 aaPredicted RBP17.25■□□□□ 0.35
SRGAP3-208ENST00000490348 WNK4Q96J92 1243 aa17.25■□□□□ 0.35
SRGAP3-208ENST00000490348 SERPINB13Q9UIV8 391 aa17.25■□□□□ 0.35
SRGAP3-208ENST00000490348 CSADQ9Y600 493 aa17.25■□□□□ 0.35
SRGAP3-208ENST00000490348 PATL2C9JE40 543 aaKnown RBP17.24■□□□□ 0.35
SRGAP3-208ENST00000490348 POLR3DP05423 398 aaPredicted RBP17.24■□□□□ 0.35
SRGAP3-208ENST00000490348 GNAT2P19087 354 aa17.24■□□□□ 0.35
SRGAP3-208ENST00000490348 NOGQ13253 232 aa17.24■□□□□ 0.35
SRGAP3-208ENST00000490348 C12orf60Q5U649 245 aa17.24■□□□□ 0.35
SRGAP3-208ENST00000490348 GIMAP6Q6P9H5 292 aa17.24■□□□□ 0.35
SRGAP3-208ENST00000490348 TTC6Q86TZ1 520 aa17.24■□□□□ 0.35
SRGAP3-208ENST00000490348 OPTNQ96CV9 577 aa17.24■□□□□ 0.35
SRGAP3-208ENST00000490348 SPDYE5A6NIY4 337 aa17.23■□□□□ 0.35
SRGAP3-208ENST00000490348 TATDN1Q6P1N9 297 aa17.23■□□□□ 0.35
SRGAP3-208ENST00000490348 IFNL3Q8IZI9 196 aa17.23■□□□□ 0.35
SRGAP3-208ENST00000490348 CRACR2BQ8N4Y2 399 aaPredicted RBP17.23■□□□□ 0.35
SRGAP3-208ENST00000490348 SLC44A5Q8NCS7 719 aa17.23■□□□□ 0.35
SRGAP3-208ENST00000490348 DYNLL2Q96FJ2 89 aa17.23■□□□□ 0.35
SRGAP3-208ENST00000490348 DIAPH3Q9NSV4 1193 aa17.23■□□□□ 0.35
SRGAP3-208ENST00000490348 CTNND1O60716 968 aaKnown RBP17.23■□□□□ 0.35
SRGAP3-208ENST00000490348 CHMLP26374 656 aa17.23■□□□□ 0.35
SRGAP3-208ENST00000490348 SHMT1P34896 483 aa17.23■□□□□ 0.35
SRGAP3-208ENST00000490348 MAP2K2P36507 400 aa17.23■□□□□ 0.35
SRGAP3-208ENST00000490348 KIF23Q02241 960 aaPredicted RBP17.23■□□□□ 0.35
SRGAP3-208ENST00000490348 BMP2KLQ5H9B9 411 aa17.23■□□□□ 0.35
SRGAP3-208ENST00000490348 SCYL3Q8IZE3 742 aa17.23■□□□□ 0.35
SRGAP3-208ENST00000490348 CCDC171Q6TFL3 1326 aa17.22■□□□□ 0.35
SRGAP3-208ENST00000490348 HIP1O00291 1037 aa17.22■□□□□ 0.35
SRGAP3-208ENST00000490348 APPP05067 770 aa17.22■□□□□ 0.35
SRGAP3-208ENST00000490348 ZBTB48P10074 688 aaPredicted RBP17.22■□□□□ 0.35
SRGAP3-208ENST00000490348 CAP2P40123 477 aa17.22■□□□□ 0.35
SRGAP3-208ENST00000490348 SBK1Q52WX2 424 aa17.22■□□□□ 0.35
SRGAP3-208ENST00000490348 CCDC84Q86UT8 332 aaPredicted RBP17.22■□□□□ 0.35
SRGAP3-208ENST00000490348 OTUD5Q96G74 571 aa17.22■□□□□ 0.35
SRGAP3-208ENST00000490348 ARPP21Q9UBL0 812 aaPredicted RBP17.22■□□□□ 0.35
SRGAP3-208ENST00000490348 DOCK1Q14185 1865 aa17.21■□□□□ 0.35
SRGAP3-208ENST00000490348 HSPD1P10809 573 aaKnown RBP17.21■□□□□ 0.35
SRGAP3-208ENST00000490348 PTPRAP18433 802 aa17.21■□□□□ 0.35
SRGAP3-208ENST00000490348 TDO2P48775 406 aa17.21■□□□□ 0.35
SRGAP3-208ENST00000490348 ERO1BQ86YB8 467 aa17.21■□□□□ 0.35
SRGAP3-208ENST00000490348 DDRGK1Q96HY6 314 aa17.21■□□□□ 0.35
SRGAP3-208ENST00000490348 IRF6O14896 467 aa17.2■□□□□ 0.34
SRGAP3-208ENST00000490348 GDF11O95390 407 aa17.2■□□□□ 0.34
SRGAP3-208ENST00000490348 MS4A4AQ96JQ5 239 aa17.2■□□□□ 0.34
SRGAP3-208ENST00000490348 LAMB1P07942 1786 aa17.2■□□□□ 0.34
SRGAP3-208ENST00000490348 ROBO3Q96MS0 1386 aa17.2■□□□□ 0.34
SRGAP3-208ENST00000490348 PPATQ06203 517 aa17.19■□□□□ 0.34
SRGAP3-208ENST00000490348 C16orf86Q6ZW13 317 aa17.19■□□□□ 0.34
SRGAP3-208ENST00000490348 TRIM34Q9BYJ4 488 aa17.19■□□□□ 0.34
SRGAP3-208ENST00000490348 NACAP1Q9BZK3 213 aa17.19■□□□□ 0.34
SRGAP3-208ENST00000490348 PHIPQ8WWQ0 1821 aa17.19■□□□□ 0.34
SRGAP3-208ENST00000490348 ATAD5Q96QE3 1844 aa17.19■□□□□ 0.34
SRGAP3-208ENST00000490348 MINDY4BA8MYZ0 360 aa17.19■□□□□ 0.34
SRGAP3-208ENST00000490348 FGAP02671 866 aa17.19■□□□□ 0.34
SRGAP3-208ENST00000490348 PPIL2Q13356 520 aa17.19■□□□□ 0.34
SRGAP3-208ENST00000490348 ALX1Q15699 326 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms