RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 INTS5Q6P9B9 1019 aaKnown RBP15.3■□□□□ 0.04
TNXB-206ENST00000490077 CNNM3Q8NE01 707 aa15.3■□□□□ 0.04
TNXB-206ENST00000490077 WDR24Q96S15 920 aa15.3■□□□□ 0.04
TNXB-206ENST00000490077 ZSWIM4Q9H7M6 989 aa15.3■□□□□ 0.04
TNXB-206ENST00000490077 NHSL1Q5SYE7 1610 aa15.29■□□□□ 0.04
TNXB-206ENST00000490077 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.29■□□□□ 0.04
TNXB-206ENST00000490077 SEC31AO94979 1220 aaKnown RBP15.29■□□□□ 0.04
TNXB-206ENST00000490077 CD44P16070 742 aaKnown RBP15.29■□□□□ 0.04
TNXB-206ENST00000490077 MDM2Q00987 491 aaPredicted RBP15.29■□□□□ 0.04
TNXB-206ENST00000490077 DPYDQ12882 1025 aa15.29■□□□□ 0.04
TNXB-206ENST00000490077 GPIHBP1Q8IV16 184 aa15.29■□□□□ 0.04
TNXB-206ENST00000490077 UBR2Q8IWV8 1755 aa15.29■□□□□ 0.04
TNXB-206ENST00000490077 PDE8AO60658 829 aa15.29■□□□□ 0.04
TNXB-206ENST00000490077 FAM47AQ5JRC9 791 aa15.29■□□□□ 0.04
TNXB-206ENST00000490077 RESP18Q5W5W9 173 aa15.29■□□□□ 0.04
TNXB-206ENST00000490077 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.29■□□□□ 0.045e-6■■□□□ 11.5
TNXB-206ENST00000490077 CSRNP2Q9H175 543 aa15.29■□□□□ 0.04
TNXB-206ENST00000490077 LAMB4A4D0S4 1761 aa15.28■□□□□ 0.04
TNXB-206ENST00000490077 PATL2C9JE40 543 aaKnown RBP15.28■□□□□ 0.04
TNXB-206ENST00000490077 SFPQP23246 707 aaKnown RBP eCLIP15.28■□□□□ 0.04
TNXB-206ENST00000490077 AMIGO3Q86WK7 504 aa15.28■□□□□ 0.04
TNXB-206ENST00000490077 FBXL16Q8N461 479 aa15.28■□□□□ 0.04
TNXB-206ENST00000490077 MPHOSPH8Q99549 860 aa15.28■□□□□ 0.04
TNXB-206ENST00000490077 OSBPL5Q9H0X9 879 aaPredicted RBP15.28■□□□□ 0.04
TNXB-206ENST00000490077 LRP2BPQ9P2M1 347 aa15.28■□□□□ 0.04
TNXB-206ENST00000490077 MAN1B1Q9UKM7 699 aa15.28■□□□□ 0.04
TNXB-206ENST00000490077 MAPK8IP1Q9UQF2 711 aa15.28■□□□□ 0.04
TNXB-206ENST00000490077 C4AP0C0L4 1744 aa15.28■□□□□ 0.04
TNXB-206ENST00000490077 C4BP0C0L5 1744 aa15.28■□□□□ 0.04
TNXB-206ENST00000490077 ARID4AP29374 1257 aaPredicted RBP15.28■□□□□ 0.04
TNXB-206ENST00000490077 KARSQ15046 597 aaKnown RBP15.28■□□□□ 0.04
TNXB-206ENST00000490077 UBE3CQ15386 1083 aa15.28■□□□□ 0.04
TNXB-206ENST00000490077 TRIM65Q6PJ69 517 aa15.28■□□□□ 0.04
TNXB-206ENST00000490077 KRBA2Q6ZNG9 492 aa15.28■□□□□ 0.04
TNXB-206ENST00000490077 BRAPQ7Z569 592 aa15.28■□□□□ 0.04
TNXB-206ENST00000490077 ZNF34Q8IZ26 560 aa15.28■□□□□ 0.04
TNXB-206ENST00000490077 CYP7A1P22680 504 aa15.27■□□□□ 0.04
TNXB-206ENST00000490077 CRKLP46109 303 aaKnown RBP15.27■□□□□ 0.04
TNXB-206ENST00000490077 CHRNDQ07001 517 aa15.27■□□□□ 0.04
TNXB-206ENST00000490077 PUM3Q15397 648 aaKnown RBP15.27■□□□□ 0.04
TNXB-206ENST00000490077 AKNAD1Q5T1N1 836 aa15.27■□□□□ 0.04
TNXB-206ENST00000490077 NOSTRINQ8IVI9 506 aa15.27■□□□□ 0.04
TNXB-206ENST00000490077 GPR101Q96P66 508 aaPredicted RBP15.27■□□□□ 0.04
TNXB-206ENST00000490077 BLZF1Q9H2G9 400 aa15.27■□□□□ 0.04
TNXB-206ENST00000490077 CPVLQ9H3G5 476 aa15.27■□□□□ 0.04
TNXB-206ENST00000490077 TFCP2L1Q9NZI6 479 aa15.27■□□□□ 0.04
TNXB-206ENST00000490077 TUBE1Q9UJT0 475 aa15.27■□□□□ 0.04
TNXB-206ENST00000490077 RNF225M0QZC1 329 aaPredicted RBP15.27■□□□□ 0.03
TNXB-206ENST00000490077 DHX16O60231 1041 aaKnown RBP15.27■□□□□ 0.03
TNXB-206ENST00000490077 ATP6V1AP38606 617 aa15.27■□□□□ 0.03
TNXB-206ENST00000490077 MFSD6Q6ZSS7 791 aa15.27■□□□□ 0.03
TNXB-206ENST00000490077 HOMER1Q86YM7 354 aa15.27■□□□□ 0.03
TNXB-206ENST00000490077 CREBRFQ8IUR6 639 aa15.27■□□□□ 0.03
TNXB-206ENST00000490077 TMEM139Q8IV31 216 aa15.27■□□□□ 0.03
TNXB-206ENST00000490077 KIF18AQ8NI77 898 aa15.27■□□□□ 0.03
TNXB-206ENST00000490077 LPIN2Q92539 896 aa15.27■□□□□ 0.03
TNXB-206ENST00000490077 TEX13AQ9BXU3 409 aaPredicted RBP15.27■□□□□ 0.03
TNXB-206ENST00000490077 FBXO2Q9UK22 296 aaPredicted RBP15.27■□□□□ 0.03
TNXB-206ENST00000490077 NIP7Q9Y221 180 aaKnown RBP eCLIP15.27■□□□□ 0.03
TNXB-206ENST00000490077 SSRP1Q08945 709 aaKnown RBP15.26■□□□□ 0.03
TNXB-206ENST00000490077 ZNF174Q15697 407 aa15.26■□□□□ 0.03
TNXB-206ENST00000490077 TXNRD3Q86VQ6 643 aa15.26■□□□□ 0.03
TNXB-206ENST00000490077 DHX58Q96C10 678 aa15.26■□□□□ 0.03
TNXB-206ENST00000490077 TFR2Q9UP52 801 aa15.26■□□□□ 0.03
TNXB-206ENST00000490077 V9GY48 417 aaPredicted RBP15.26■□□□□ 0.03
TNXB-206ENST00000490077 PDIA4P13667 645 aaKnown RBP15.26■□□□□ 0.03
TNXB-206ENST00000490077 DMTNQ08495 405 aa15.26■□□□□ 0.03
TNXB-206ENST00000490077 REXO1L1PQ8IX06 675 aa15.26■□□□□ 0.03
TNXB-206ENST00000490077 NFE2L3Q9Y4A8 694 aa15.26■□□□□ 0.03
TNXB-206ENST00000490077 RASGRP4Q8TDF6 673 aa15.25■□□□□ 0.03
TNXB-206ENST00000490077 NAT10Q9H0A0 1025 aaKnown RBP15.25■□□□□ 0.03
TNXB-206ENST00000490077 RAI14Q9P0K7 980 aa15.25■□□□□ 0.03
TNXB-206ENST00000490077 NKRFO15226 690 aaKnown RBP eCLIP15.25■□□□□ 0.03
TNXB-206ENST00000490077 MMP1P03956 469 aa15.25■□□□□ 0.03
TNXB-206ENST00000490077 PKN1Q16512 942 aa15.25■□□□□ 0.03
TNXB-206ENST00000490077 SMAP1Q8IYB5 467 aaPredicted RBP15.25■□□□□ 0.03
TNXB-206ENST00000490077 CRACR2BQ8N4Y2 399 aaPredicted RBP15.25■□□□□ 0.03
TNXB-206ENST00000490077 PLIN2Q99541 437 aa15.25■□□□□ 0.03
TNXB-206ENST00000490077 ZCCHC17Q9NP64 241 aaKnown RBP15.25■□□□□ 0.03
TNXB-206ENST00000490077 COL1A1P02452 1464 aaPredicted RBP15.25■□□□□ 0.03
TNXB-206ENST00000490077 RTN1Q16799 776 aa15.24■□□□□ 0.03
TNXB-206ENST00000490077 ERFEQ4G0M1 354 aa15.24■□□□□ 0.03
TNXB-206ENST00000490077 CELF1Q92879 486 aaKnown RBP15.24■□□□□ 0.03
TNXB-206ENST00000490077 FMNL1O95466 1100 aaPredicted RBP15.24■□□□□ 0.03
TNXB-206ENST00000490077 WTAPQ15007 396 aa15.24■□□□□ 0.03
TNXB-206ENST00000490077 ZNF654Q8IZM8 581 aa15.24■□□□□ 0.03
TNXB-206ENST00000490077 ENAHQ8N8S7 591 aaPredicted RBP15.24■□□□□ 0.03
TNXB-206ENST00000490077 PLEKHG2Q9H7P9 1386 aa15.24■□□□□ 0.03
TNXB-206ENST00000490077 SOWAHDA6NJG2 315 aa15.24■□□□□ 0.03
TNXB-206ENST00000490077 MYL5Q02045 173 aa15.24■□□□□ 0.03
TNXB-206ENST00000490077 SGMS1Q86VZ5 419 aa15.24■□□□□ 0.03
TNXB-206ENST00000490077 CARD6Q9BX69 1037 aa15.24■□□□□ 0.03
TNXB-206ENST00000490077 MRPL44Q9H9J2 332 aaKnown RBP15.24■□□□□ 0.03
TNXB-206ENST00000490077 DDX41Q9UJV9 622 aaKnown RBP15.24■□□□□ 0.03
TNXB-206ENST00000490077 TNKSO95271 1327 aa15.24■□□□□ 0.03
TNXB-206ENST00000490077 BCL9O00512 1426 aa15.24■□□□□ 0.03
TNXB-206ENST00000490077 VWA3AA6NCI4 1184 aa15.23■□□□□ 0.03
TNXB-206ENST00000490077 NUTM2BA6NNL0 878 aaPredicted RBP15.23■□□□□ 0.03
TNXB-206ENST00000490077 NUTM2EB1AL46 878 aaPredicted RBP15.23■□□□□ 0.03
TNXB-206ENST00000490077 URI1O94763 535 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms