RNA–Protein interactions for RNA: ENST00000489826.1

UBA7-209, Transcript of ubiquitin like modifier activating enzyme 7, human

TSL 2

Gene UBA7, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA7-209	ENST00000489826	ARHGAP45	Q92619	1136 aa		13.71	□□□□□ -0.21
UBA7-209	ENST00000489826	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.71	□□□□□ -0.21
UBA7-209	ENST00000489826	AGTPBP1	Q9UPW5	1226 aa		13.71	□□□□□ -0.21
UBA7-209	ENST00000489826	TRIM75P	A6NK02	468 aa		13.7	□□□□□ -0.22
UBA7-209	ENST00000489826	LRRC26	Q2I0M4	334 aa		13.7	□□□□□ -0.22
UBA7-209	ENST00000489826	METTL24	Q5JXM2	366 aa		13.7	□□□□□ -0.22
UBA7-209	ENST00000489826	TREML2	Q5T2D2	321 aa		13.7	□□□□□ -0.22
UBA7-209	ENST00000489826	ZNF697	Q5TEC3	545 aa		13.7	□□□□□ -0.22
UBA7-209	ENST00000489826	CCDC84	Q86UT8	332 aa	Predicted RBP	13.7	□□□□□ -0.22
UBA7-209	ENST00000489826	MRPL50	Q8N5N7	158 aa	Known RBP	13.7	□□□□□ -0.22
UBA7-209	ENST00000489826	VGLL2	Q8N8G2	317 aa		13.7	□□□□□ -0.22
UBA7-209	ENST00000489826	MAFA	Q8NHW3	353 aa	Predicted RBP	13.7	□□□□□ -0.22
UBA7-209	ENST00000489826	PANK1	Q8TE04	598 aa		13.7	□□□□□ -0.22
UBA7-209	ENST00000489826	TRIB2	Q92519	343 aa		13.7	□□□□□ -0.22
UBA7-209	ENST00000489826	SUCLG2	Q96I99	432 aa		13.7	□□□□□ -0.22
UBA7-209	ENST00000489826	API5	Q9BZZ5	524 aa	Known RBP	13.7	□□□□□ -0.22
UBA7-209	ENST00000489826	CHMP4B	Q9H444	224 aa	Known RBP	13.7	□□□□□ -0.22
UBA7-209	ENST00000489826	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.7	□□□□□ -0.22
UBA7-209	ENST00000489826	GJD2	Q9UKL4	321 aa		13.7	□□□□□ -0.22
UBA7-209	ENST00000489826	NOB1	Q9ULX3	412 aa	Known RBP	13.7	□□□□□ -0.22
UBA7-209	ENST00000489826	SLURP2	P0DP57	97 aa		13.69	□□□□□ -0.22
UBA7-209	ENST00000489826	COL6A1	P12109	1028 aa		13.69	□□□□□ -0.22
UBA7-209	ENST00000489826	TRIM27	P14373	513 aa		13.69	□□□□□ -0.22
UBA7-209	ENST00000489826	KAZALD1	Q96I82	304 aa		13.69	□□□□□ -0.22
UBA7-209	ENST00000489826	CDX2	Q99626	313 aa	Predicted RBP	13.69	□□□□□ -0.22
UBA7-209	ENST00000489826	USP40	Q9NVE5	1235 aa		13.69	□□□□□ -0.22
UBA7-209	ENST00000489826	PNMA3	Q9UL41	463 aa		13.69	□□□□□ -0.22
UBA7-209	ENST00000489826	COG6	Q9Y2V7	657 aa		13.69	□□□□□ -0.22
UBA7-209	ENST00000489826	PDE8B	O95263	885 aa		13.68	□□□□□ -0.22
UBA7-209	ENST00000489826	PRKAR2A	P13861	404 aa	Known RBP	13.68	□□□□□ -0.22
UBA7-209	ENST00000489826	COL9A1	P20849	921 aa		13.68	□□□□□ -0.22
UBA7-209	ENST00000489826	MVP	Q14764	893 aa	Known RBP	13.68	□□□□□ -0.22
UBA7-209	ENST00000489826	MAP3K21	Q5TCX8	1036 aa		13.68	□□□□□ -0.22
UBA7-209	ENST00000489826	WDR66	Q8TBY9	1149 aa		13.68	□□□□□ -0.22
UBA7-209	ENST00000489826	LRRFIP2	Q9Y608	721 aa	Known RBP	13.68	□□□□□ -0.22
UBA7-209	ENST00000489826	PRDX5	P30044	214 aa		13.67	□□□□□ -0.22
UBA7-209	ENST00000489826	RGS3	P49796	1198 aa		13.67	□□□□□ -0.22
UBA7-209	ENST00000489826	SH3BP5L	Q7L8J4	393 aa		13.67	□□□□□ -0.22
UBA7-209	ENST00000489826	CLUAP1	Q96AJ1	413 aa		13.67	□□□□□ -0.22
UBA7-209	ENST00000489826	DDX19B	Q9UMR2	479 aa		13.67	□□□□□ -0.22
UBA7-209	ENST00000489826	PTPRC	P08575	1304 aa		13.66	□□□□□ -0.22
UBA7-209	ENST00000489826	CTNND1	O60716	968 aa	Known RBP	13.66	□□□□□ -0.22
UBA7-209	ENST00000489826	CYP2B6	P20813	491 aa		13.66	□□□□□ -0.22
UBA7-209	ENST00000489826	GCLC	P48506	637 aa	Predicted RBP	13.66	□□□□□ -0.22
UBA7-209	ENST00000489826	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.66	□□□□□ -0.22
UBA7-209	ENST00000489826	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.66	□□□□□ -0.22
UBA7-209	ENST00000489826	RLF	Q13129	1914 aa		13.65	□□□□□ -0.22
UBA7-209	ENST00000489826	ENTPD3	O75355	529 aa		13.65	□□□□□ -0.22
UBA7-209	ENST00000489826	ALDH1L1	O75891	902 aa		13.65	□□□□□ -0.22
UBA7-209	ENST00000489826	IFIT1	P09914	478 aa	Known RBP	13.65	□□□□□ -0.22
UBA7-209	ENST00000489826	RLBP1	P12271	317 aa		13.65	□□□□□ -0.22
UBA7-209	ENST00000489826	FGFR2	P21802	821 aa		13.65	□□□□□ -0.22
UBA7-209	ENST00000489826	MAP3K10	Q02779	954 aa		13.65	□□□□□ -0.22
UBA7-209	ENST00000489826	PUM3	Q15397	648 aa	Known RBP	13.65	□□□□□ -0.22
UBA7-209	ENST00000489826	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.65	□□□□□ -0.22
UBA7-209	ENST00000489826	MYLIP	Q8WY64	445 aa		13.65	□□□□□ -0.22
UBA7-209	ENST00000489826	SEMA6B	Q9H3T3	888 aa		13.65	□□□□□ -0.22
UBA7-209	ENST00000489826	BICC1	Q9H694	974 aa	Known RBP	13.65	□□□□□ -0.22
UBA7-209	ENST00000489826	RAPGEFL1	Q9UHV5	662 aa		13.65	□□□□□ -0.22
UBA7-209	ENST00000489826	RFX7	Q2KHR2	1363 aa		13.65	□□□□□ -0.22
UBA7-209	ENST00000489826	DDTL	A6NHG4	134 aa	Predicted RBP	13.64	□□□□□ -0.23
UBA7-209	ENST00000489826	LDHB	P07195	334 aa	Known RBP	13.64	□□□□□ -0.23
UBA7-209	ENST00000489826	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.64	□□□□□ -0.23
UBA7-209	ENST00000489826	CACNB2	Q08289	660 aa	Predicted RBP	13.64	□□□□□ -0.23
UBA7-209	ENST00000489826	SLC4A10	Q6U841	1118 aa		13.64	□□□□□ -0.23
UBA7-209	ENST00000489826	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.64	□□□□□ -0.23
UBA7-209	ENST00000489826	ITPRIP	Q8IWB1	547 aa		13.64	□□□□□ -0.23
UBA7-209	ENST00000489826	KLHDC4	Q8TBB5	520 aa		13.64	□□□□□ -0.23
UBA7-209	ENST00000489826	SYMPK	Q92797	1274 aa	Known RBP	13.64	□□□□□ -0.23
UBA7-209	ENST00000489826	IDI2	Q9BXS1	227 aa		13.64	□□□□□ -0.23
UBA7-209	ENST00000489826	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.64	□□□□□ -0.23
UBA7-209	ENST00000489826	BDP1	A6H8Y1	2624 aa		13.64	□□□□□ -0.23
UBA7-209	ENST00000489826	CCND3	P30281	292 aa	Predicted RBP	13.63	□□□□□ -0.23
UBA7-209	ENST00000489826	HMGCS2	P54868	508 aa		13.63	□□□□□ -0.23
UBA7-209	ENST00000489826	RABL6	Q3YEC7	729 aa	Predicted RBP	13.63	□□□□□ -0.23
UBA7-209	ENST00000489826	LHX8	Q68G74	356 aa		13.63	□□□□□ -0.23
UBA7-209	ENST00000489826	ANKRD44	Q8N8A2	993 aa		13.63	□□□□□ -0.23
UBA7-209	ENST00000489826	SRCIN1	Q9C0H9	1055 aa		13.63	□□□□□ -0.23
UBA7-209	ENST00000489826	DDX4	Q9NQI0	724 aa	Known RBP	13.63	□□□□□ -0.23
UBA7-209	ENST00000489826	MORF4L1	Q9UBU8	362 aa		13.63	□□□□□ -0.23
UBA7-209	ENST00000489826	SLC5A1	P13866	664 aa		13.62	□□□□□ -0.23
UBA7-209	ENST00000489826	ZKSCAN1	P17029	563 aa	Predicted RBP	13.62	□□□□□ -0.23
UBA7-209	ENST00000489826	SPP2	Q13103	211 aa		13.62	□□□□□ -0.23
UBA7-209	ENST00000489826	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
UBA7-209	ENST00000489826	TMEM57	Q8N5G2	664 aa		13.62	□□□□□ -0.23
UBA7-209	ENST00000489826	SOCS4	Q8WXH5	440 aa		13.62	□□□□□ -0.23
UBA7-209	ENST00000489826	NUDT12	Q9BQG2	462 aa		13.62	□□□□□ -0.23
UBA7-209	ENST00000489826	TTYH1	Q9H313	450 aa	Predicted RBP	13.62	□□□□□ -0.23
UBA7-209	ENST00000489826	TNN	Q9UQP3	1299 aa		13.62	□□□□□ -0.23
UBA7-209	ENST00000489826	FAM196B	A6NMK8	535 aa		13.61	□□□□□ -0.23
UBA7-209	ENST00000489826	PEX10	O60683	326 aa		13.61	□□□□□ -0.23
UBA7-209	ENST00000489826	XRCC5	P13010	732 aa	Known RBP	13.61	□□□□□ -0.23
UBA7-209	ENST00000489826	FOSL2	P15408	326 aa		13.61	□□□□□ -0.23
UBA7-209	ENST00000489826	PICALM	Q13492	652 aa		13.61	□□□□□ -0.23
UBA7-209	ENST00000489826	SHH	Q15465	462 aa		13.61	□□□□□ -0.23
UBA7-209	ENST00000489826	CCL14	Q16627	93 aa		13.61	□□□□□ -0.23
UBA7-209	ENST00000489826	ZNF280C	Q8ND82	737 aa		13.61	□□□□□ -0.23
UBA7-209	ENST00000489826	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.61	□□□□□ -0.23
UBA7-209	ENST00000489826	UTY	O14607	1347 aa		13.61	□□□□□ -0.23
UBA7-209	ENST00000489826	GAK	O14976	1311 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms