RNA–Protein interactions for RNA: ENST00000489698.1

COPS9-203, Transcript of COP9 signalosome subunit 9, humanhuman

TSL 2

Gene COPS9, Length 640 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9-203ENST00000489698 COL2A1P02458 1487 aaPredicted RBP29.6■■■□□ 2.33
COPS9-203ENST00000489698 CENPFP49454 3210 aa29.6■■■□□ 2.33
COPS9-203ENST00000489698 RAB11FIP3O75154 756 aa29.59■■■□□ 2.33
COPS9-203ENST00000489698 MOGSQ13724 837 aa29.59■■■□□ 2.33
COPS9-203ENST00000489698 ARHGEF6Q15052 776 aa29.59■■■□□ 2.33
COPS9-203ENST00000489698 CCDC84Q86UT8 332 aaPredicted RBP29.59■■■□□ 2.33
COPS9-203ENST00000489698 AFG3L2Q9Y4W6 797 aa29.59■■■□□ 2.33
COPS9-203ENST00000489698 MKI67P46013 3256 aaKnown RBP29.59■■■□□ 2.33
COPS9-203ENST00000489698 ECM2O94769 699 aaPredicted RBP29.58■■■□□ 2.33
COPS9-203ENST00000489698 MAP3K12Q12852 859 aa29.58■■■□□ 2.33
COPS9-203ENST00000489698 GADL1Q6ZQY3 521 aa29.58■■■□□ 2.33
COPS9-203ENST00000489698 RBBP6Q7Z6E9 1792 aaKnown RBP29.58■■■□□ 2.33
COPS9-203ENST00000489698 MIGA1Q8NAN2 632 aa29.58■■■□□ 2.33
COPS9-203ENST00000489698 GCC1Q96CN9 775 aa29.58■■■□□ 2.33
COPS9-203ENST00000489698 PI4KBQ9UBF8 816 aa29.58■■■□□ 2.33
COPS9-203ENST00000489698 CPA4Q9UI42 421 aa29.58■■■□□ 2.33
COPS9-203ENST00000489698 CDK5RAP2Q96SN8 1893 aa29.57■■■□□ 2.32
COPS9-203ENST00000489698 FLT1P17948 1338 aa29.57■■■□□ 2.32
COPS9-203ENST00000489698 TRIM75PA6NK02 468 aa29.57■■■□□ 2.32
COPS9-203ENST00000489698 KIF22Q14807 665 aa29.57■■■□□ 2.32
COPS9-203ENST00000489698 DHX36Q9H2U1 1008 aaKnown RBP29.57■■■□□ 2.32
COPS9-203ENST00000489698 KIAA0100Q14667 2235 aaKnown RBP29.57■■■□□ 2.32
COPS9-203ENST00000489698 A0A0G2JLL6 359 aaPredicted RBP29.56■■■□□ 2.32
COPS9-203ENST00000489698 FASTKD5Q7L8L6 764 aaKnown RBP29.56■■■□□ 2.32
COPS9-203ENST00000489698 PRRT2Q7Z6L0 340 aaPredicted RBP29.56■■■□□ 2.32
COPS9-203ENST00000489698 SAP30BPQ9UHR5 308 aaKnown RBP29.56■■■□□ 2.32
COPS9-203ENST00000489698 HERC5Q9UII4 1024 aaKnown RBP29.56■■■□□ 2.32
COPS9-203ENST00000489698 GPAT2Q6NUI2 795 aa29.55■■■□□ 2.32
COPS9-203ENST00000489698 PALD1Q9ULE6 856 aa29.55■■■□□ 2.32
COPS9-203ENST00000489698 C17orf99Q6UX52 265 aa29.54■■■□□ 2.32
COPS9-203ENST00000489698 DNAJC2Q99543 621 aaKnown RBP29.54■■■□□ 2.32
COPS9-203ENST00000489698 TRIM34Q9BYJ4 488 aa29.54■■■□□ 2.32
COPS9-203ENST00000489698 ARHGAP39Q9C0H5 1083 aa29.54■■■□□ 2.32
COPS9-203ENST00000489698 FOCADQ5VW36 1801 aa29.54■■■□□ 2.32
COPS9-203ENST00000489698 PHIPQ8WWQ0 1821 aa29.54■■■□□ 2.32
COPS9-203ENST00000489698 CYP2C8P10632 490 aa29.53■■■□□ 2.32
COPS9-203ENST00000489698 CAP2P40123 477 aa29.53■■■□□ 2.32
COPS9-203ENST00000489698 USP5P45974 858 aa29.53■■■□□ 2.32
COPS9-203ENST00000489698 LACTBP83111 547 aaPredicted RBP29.53■■■□□ 2.32
COPS9-203ENST00000489698 RRP1BQ14684 758 aaKnown RBP29.53■■■□□ 2.32
COPS9-203ENST00000489698 TTF1Q15361 905 aaPredicted RBP29.53■■■□□ 2.32
COPS9-203ENST00000489698 SLC4A8Q2Y0W8 1093 aa29.53■■■□□ 2.32
COPS9-203ENST00000489698 CRACR2BQ8N4Y2 399 aaPredicted RBP29.53■■■□□ 2.32
COPS9-203ENST00000489698 PARK7Q99497 189 aaKnown RBP29.53■■■□□ 2.32
COPS9-203ENST00000489698 ATAD5Q96QE3 1844 aa29.52■■■□□ 2.32
COPS9-203ENST00000489698 ARMC5Q96C12 935 aa29.52■■■□□ 2.32
COPS9-203ENST00000489698 ZSWIM8A7E2V4 1837 aa29.52■■■□□ 2.32
COPS9-203ENST00000489698 PTPRFP10586 1907 aa29.51■■■□□ 2.32
COPS9-203ENST00000489698 GOLIM4O00461 696 aa29.51■■■□□ 2.31
COPS9-203ENST00000489698 FOXP4Q8IVH2 680 aaPredicted RBP29.51■■■□□ 2.31
COPS9-203ENST00000489698 BRCA2P51587 3418 aa29.51■■■□□ 2.31
COPS9-203ENST00000489698 SIPA1L1O43166 1804 aa29.5■■■□□ 2.31
COPS9-203ENST00000489698 HLA-DOAP06340 250 aa29.5■■■□□ 2.31
COPS9-203ENST00000489698 SPP2Q13103 211 aa29.5■■■□□ 2.31
COPS9-203ENST00000489698 CERS3Q8IU89 383 aa29.5■■■□□ 2.31
COPS9-203ENST00000489698 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.5■■■□□ 2.31
COPS9-203ENST00000489698 SLC9C2Q5TAH2 1124 aa29.49■■■□□ 2.31
COPS9-203ENST00000489698 BOLA2Q9H3K6 86 aa29.49■■■□□ 2.31
COPS9-203ENST00000489698 PTCH2Q9Y6C5 1203 aa29.49■■■□□ 2.31
COPS9-203ENST00000489698 MYH1P12882 1939 aa29.49■■■□□ 2.31
COPS9-203ENST00000489698 ADGRA2Q96PE1 1338 aa29.48■■■□□ 2.31
COPS9-203ENST00000489698 USP17L5A8MUK1 530 aa29.48■■■□□ 2.31
COPS9-203ENST00000489698 EN2P19622 333 aaPredicted RBP29.48■■■□□ 2.31
COPS9-203ENST00000489698 TMED8Q6PL24 325 aaPredicted RBP29.48■■■□□ 2.31
COPS9-203ENST00000489698 ZNF280CQ8ND82 737 aa29.48■■■□□ 2.31
COPS9-203ENST00000489698 EDC3Q96F86 508 aaKnown RBP29.48■■■□□ 2.31
COPS9-203ENST00000489698 LRRCC1Q9C099 1032 aa29.48■■■□□ 2.31
COPS9-203ENST00000489698 SMARCA5O60264 1052 aaPredicted RBP29.47■■■□□ 2.31
COPS9-203ENST00000489698 PDE6AP16499 860 aa29.47■■■□□ 2.31
COPS9-203ENST00000489698 PSMC4P43686 418 aa29.47■■■□□ 2.31
COPS9-203ENST00000489698 HABP4Q5JVS0 413 aaKnown RBP29.47■■■□□ 2.31
COPS9-203ENST00000489698 DNAJC18Q9H819 358 aa29.47■■■□□ 2.31
COPS9-203ENST00000489698 MAGEB6P1A0A0J9YX57 407 aa29.46■■■□□ 2.31
COPS9-203ENST00000489698 FMNL1O95466 1100 aaPredicted RBP29.46■■■□□ 2.31
COPS9-203ENST00000489698 TBC1D2Q9BYX2 928 aa29.46■■■□□ 2.31
COPS9-203ENST00000489698 AS3MTQ9HBK9 375 aa29.46■■■□□ 2.31
COPS9-203ENST00000489698 GDF11O95390 407 aa29.45■■■□□ 2.31
COPS9-203ENST00000489698 SLC9C1Q4G0N8 1177 aa29.45■■■□□ 2.31
COPS9-203ENST00000489698 METTL16Q86W50 562 aaKnown RBP29.45■■■□□ 2.31
COPS9-203ENST00000489698 YTHDC1Q96MU7 727 aaKnown RBP29.45■■■□□ 2.31
COPS9-203ENST00000489698 AGTPBP1Q9UPW5 1226 aa29.45■■■□□ 2.31
COPS9-203ENST00000489698 SLC45A1Q9Y2W3 748 aa29.45■■■□□ 2.31
COPS9-203ENST00000489698 ZNF532Q9HCE3 1301 aa29.45■■■□□ 2.3
COPS9-203ENST00000489698 GNRH1P01148 92 aa29.44■■■□□ 2.3
COPS9-203ENST00000489698 ASNSP08243 561 aa29.44■■■□□ 2.3
COPS9-203ENST00000489698 ATP5JP18859 108 aa29.44■■■□□ 2.3
COPS9-203ENST00000489698 CTGFP29279 349 aa29.44■■■□□ 2.3
COPS9-203ENST00000489698 HMGCS2P54868 508 aa29.44■■■□□ 2.3
COPS9-203ENST00000489698 TREML2Q5T2D2 321 aa29.44■■■□□ 2.3
COPS9-203ENST00000489698 SMCR8Q8TEV9 937 aaPredicted RBP29.44■■■□□ 2.3
COPS9-203ENST00000489698 TRIM47Q96LD4 638 aa29.44■■■□□ 2.3
COPS9-203ENST00000489698 RIOK1Q9BRS2 568 aaKnown RBP29.44■■■□□ 2.3
COPS9-203ENST00000489698 TMEM106CQ9BVX2 250 aa29.44■■■□□ 2.3
COPS9-203ENST00000489698 PAG1Q9NWQ8 432 aa29.44■■■□□ 2.3
COPS9-203ENST00000489698 BCRP11274 1271 aa29.43■■■□□ 2.3
COPS9-203ENST00000489698 JAG1P78504 1218 aa29.43■■■□□ 2.3
COPS9-203ENST00000489698 NBPF11Q86T75 865 aa29.43■■■□□ 2.3
COPS9-203ENST00000489698 ZNF333Q96JL9 665 aa29.43■■■□□ 2.3
COPS9-203ENST00000489698 SHROOM1Q2M3G4 852 aaPredicted RBP29.42■■■□□ 2.3
COPS9-203ENST00000489698 PROCA1Q8NCQ7 364 aaPredicted RBP29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms