RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 A0A1W2PPC1 479 aa14.5□□□□□ -0.09
ACTN4-206ENST00000489451 TRIM75PA6NK02 468 aa14.5□□□□□ -0.09
ACTN4-206ENST00000489451 IPO8O15397 1037 aaKnown RBP14.5□□□□□ -0.09
ACTN4-206ENST00000489451 FMNL1O95466 1100 aaPredicted RBP14.5□□□□□ -0.09
ACTN4-206ENST00000489451 RLBP1P12271 317 aa14.5□□□□□ -0.09
ACTN4-206ENST00000489451 GRK4P32298 578 aa14.5□□□□□ -0.09
ACTN4-206ENST00000489451 GADL1Q6ZQY3 521 aa14.5□□□□□ -0.09
ACTN4-206ENST00000489451 ADGRA1Q86SQ6 560 aa14.5□□□□□ -0.09
ACTN4-206ENST00000489451 SSH3Q8TE77 659 aa14.5□□□□□ -0.09
ACTN4-206ENST00000489451 DBNDD2Q9BQY9 259 aa14.5□□□□□ -0.09
ACTN4-206ENST00000489451 PRO3102Q9H379 93 aa14.5□□□□□ -0.09
ACTN4-206ENST00000489451 C1orf115Q9H7X2 142 aa14.5□□□□□ -0.09
ACTN4-206ENST00000489451 SLC45A1Q9Y2W3 748 aa14.5□□□□□ -0.09
ACTN4-206ENST00000489451 UNC80Q8N2C7 3258 aa14.5□□□□□ -0.09
ACTN4-206ENST00000489451 JAG1P78504 1218 aa14.49□□□□□ -0.09
ACTN4-206ENST00000489451 SHROOM1Q2M3G4 852 aaPredicted RBP14.49□□□□□ -0.09
ACTN4-206ENST00000489451 TNNI3KQ59H18 835 aa14.49□□□□□ -0.09
ACTN4-206ENST00000489451 FASTKD5Q7L8L6 764 aaKnown RBP14.49□□□□□ -0.09
ACTN4-206ENST00000489451 SH3RF3Q8TEJ3 882 aaPredicted RBP14.49□□□□□ -0.09
ACTN4-206ENST00000489451 DNAJC18Q9H819 358 aa14.49□□□□□ -0.09
ACTN4-206ENST00000489451 PRDM6Q9NQX0 595 aa14.49□□□□□ -0.09
ACTN4-206ENST00000489451 SNRKQ9NRH2 765 aa14.49□□□□□ -0.09
ACTN4-206ENST00000489451 RAI14Q9P0K7 980 aa14.49□□□□□ -0.09
ACTN4-206ENST00000489451 AGTPBP1Q9UPW5 1226 aa14.49□□□□□ -0.09
ACTN4-206ENST00000489451 STXBP5LQ9Y2K9 1186 aa14.49□□□□□ -0.09
ACTN4-206ENST00000489451 FPGT-TNNI3KV9GXZ4 949 aa14.49□□□□□ -0.09
ACTN4-206ENST00000489451 PLXNB2O15031 1838 aa14.49□□□□□ -0.09
ACTN4-206ENST00000489451 CYP2E1P05181 493 aaPredicted RBP14.48□□□□□ -0.09
ACTN4-206ENST00000489451 CCL5P13501 91 aa14.48□□□□□ -0.09
ACTN4-206ENST00000489451 FCGRTP55899 365 aa14.48□□□□□ -0.09
ACTN4-206ENST00000489451 G3BP1Q13283 466 aaKnown RBP eCLIP14.48□□□□□ -0.091e-14■■■□□ 15.1
ACTN4-206ENST00000489451 ZKSCAN2Q63HK3 967 aa14.48□□□□□ -0.09
ACTN4-206ENST00000489451 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.48□□□□□ -0.09
ACTN4-206ENST00000489451 RAET1EQ8TD07 263 aa14.48□□□□□ -0.09
ACTN4-206ENST00000489451 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.48□□□□□ -0.093e-7■■□□□ 13.1
ACTN4-206ENST00000489451 GPR108Q9NPR9 543 aa14.48□□□□□ -0.09
ACTN4-206ENST00000489451 TLR7Q9NYK1 1049 aaKnown RBP14.48□□□□□ -0.09
ACTN4-206ENST00000489451 HOXD10P28358 340 aa14.47□□□□□ -0.09
ACTN4-206ENST00000489451 GJA8P48165 433 aa14.47□□□□□ -0.09
ACTN4-206ENST00000489451 ATP8B2P98198 1209 aa14.47□□□□□ -0.09
ACTN4-206ENST00000489451 GORABQ5T7V8 394 aa14.47□□□□□ -0.09
ACTN4-206ENST00000489451 DEFB123Q8N688 67 aa14.47□□□□□ -0.09
ACTN4-206ENST00000489451 AATFQ9NY61 560 aaKnown RBP eCLIP14.47□□□□□ -0.09
ACTN4-206ENST00000489451 DBNLQ9UJU6 430 aaKnown RBP14.47□□□□□ -0.09
ACTN4-206ENST00000489451 ZBTB7BO15156 539 aaPredicted RBP14.46□□□□□ -0.09
ACTN4-206ENST00000489451 MAP4K4O95819 1239 aaPredicted RBP14.46□□□□□ -0.09
ACTN4-206ENST00000489451 LDHCP07864 332 aa14.46□□□□□ -0.09
ACTN4-206ENST00000489451 GJB1P08034 283 aa14.46□□□□□ -0.09
ACTN4-206ENST00000489451 UQCRFS1P1P0C7P4 283 aa14.46□□□□□ -0.09
ACTN4-206ENST00000489451 ELNP15502 786 aa14.46□□□□□ -0.09
ACTN4-206ENST00000489451 CAP2P40123 477 aa14.46□□□□□ -0.09
ACTN4-206ENST00000489451 FLT3LGP49771 235 aa14.46□□□□□ -0.09
ACTN4-206ENST00000489451 GSTO1P78417 241 aa14.46□□□□□ -0.09
ACTN4-206ENST00000489451 SPP2Q13103 211 aa14.46□□□□□ -0.09
ACTN4-206ENST00000489451 TEX11Q8IYF3 940 aa14.46□□□□□ -0.09
ACTN4-206ENST00000489451 ANKRD13CQ8N6S4 541 aa14.46□□□□□ -0.09
ACTN4-206ENST00000489451 HTATIP2Q9BUP3 242 aa14.46□□□□□ -0.09
ACTN4-206ENST00000489451 UNC93B1Q9H1C4 597 aa14.46□□□□□ -0.09
ACTN4-206ENST00000489451 PIH1D3Q9NQM4 214 aaKnown RBP14.46□□□□□ -0.09
ACTN4-206ENST00000489451 NOP58Q9Y2X3 529 aaKnown RBP14.46□□□□□ -0.09
ACTN4-206ENST00000489451 NR2E3Q9Y5X4 410 aa14.46□□□□□ -0.09
ACTN4-206ENST00000489451 ALPK3Q96L96 1907 aa14.46□□□□□ -0.09
ACTN4-206ENST00000489451 FLT1P17948 1338 aa14.45□□□□□ -0.1
ACTN4-206ENST00000489451 KCNA4P22459 653 aa14.45□□□□□ -0.1
ACTN4-206ENST00000489451 ZAP70P43403 619 aa14.45□□□□□ -0.1
ACTN4-206ENST00000489451 PPP4CP60510 307 aa14.45□□□□□ -0.1
ACTN4-206ENST00000489451 DDX60LQ5H9U9 1706 aaKnown RBP14.45□□□□□ -0.1
ACTN4-206ENST00000489451 SH3D19Q5HYK7 790 aa14.45□□□□□ -0.1
ACTN4-206ENST00000489451 METTL16Q86W50 562 aaKnown RBP14.45□□□□□ -0.1
ACTN4-206ENST00000489451 ZNF280CQ8ND82 737 aa14.45□□□□□ -0.1
ACTN4-206ENST00000489451 SLAIN1Q8ND83 568 aa14.45□□□□□ -0.1
ACTN4-206ENST00000489451 LRP2BPQ9P2M1 347 aa14.45□□□□□ -0.1
ACTN4-206ENST00000489451 SURF6O75683 361 aaKnown RBP14.44□□□□□ -0.1
ACTN4-206ENST00000489451 INHAP05111 366 aa14.44□□□□□ -0.1
ACTN4-206ENST00000489451 HMGCS2P54868 508 aa14.44□□□□□ -0.1
ACTN4-206ENST00000489451 IRF5Q13568 498 aa14.44□□□□□ -0.1
ACTN4-206ENST00000489451 FAM110CQ1W6H9 321 aa14.44□□□□□ -0.1
ACTN4-206ENST00000489451 TTC39AQ5SRH9 613 aa14.44□□□□□ -0.1
ACTN4-206ENST00000489451 NAA16Q6N069 864 aaPredicted RBP14.44□□□□□ -0.1
ACTN4-206ENST00000489451 MIER1Q8N108 512 aa14.44□□□□□ -0.1
ACTN4-206ENST00000489451 PROCA1Q8NCQ7 364 aaPredicted RBP14.44□□□□□ -0.1
ACTN4-206ENST00000489451 SMCR8Q8TEV9 937 aaPredicted RBP14.44□□□□□ -0.1
ACTN4-206ENST00000489451 TGFBRAP1Q8WUH2 860 aa14.44□□□□□ -0.1
ACTN4-206ENST00000489451 EAF2Q96CJ1 260 aaPredicted RBP14.44□□□□□ -0.1
ACTN4-206ENST00000489451 ZNF512BQ96KM6 892 aaPredicted RBP14.44□□□□□ -0.1
ACTN4-206ENST00000489451 RNF208Q9H0X6 261 aa14.44□□□□□ -0.1
ACTN4-206ENST00000489451 HERC5Q9UII4 1024 aaKnown RBP14.44□□□□□ -0.1
ACTN4-206ENST00000489451 NDUFB9Q9Y6M9 179 aa14.44□□□□□ -0.1
ACTN4-206ENST00000489451 MYH1P12882 1939 aa14.44□□□□□ -0.1
ACTN4-206ENST00000489451 TNPO2O14787 897 aaKnown RBP14.43□□□□□ -0.1
ACTN4-206ENST00000489451 ADCY3O60266 1144 aa14.43□□□□□ -0.1
ACTN4-206ENST00000489451 PEX10O60683 326 aa14.43□□□□□ -0.1
ACTN4-206ENST00000489451 DYNLL1P63167 89 aaKnown RBP14.43□□□□□ -0.1
ACTN4-206ENST00000489451 POTEEQ6S8J3 1075 aa14.43□□□□□ -0.1
ACTN4-206ENST00000489451 Q7L0L9 218 aa14.43□□□□□ -0.1
ACTN4-206ENST00000489451 MAPKAPK5Q8IW41 473 aa14.43□□□□□ -0.1
ACTN4-206ENST00000489451 U2AF1L4Q8WU68 220 aaKnown RBP14.43□□□□□ -0.1
ACTN4-206ENST00000489451 CCDC8Q9H0W5 538 aaPredicted RBP14.43□□□□□ -0.1
ACTN4-206ENST00000489451 ASCC2Q9H1I8 757 aaPredicted RBP14.43□□□□□ -0.1
ACTN4-206ENST00000489451 PI4KBQ9UBF8 816 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms