RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 RIOK1Q9BRS2 568 aaKnown RBP23.04■■□□□ 1.28
MRPL55-230ENST00000489430 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.04■■□□□ 1.28
MRPL55-230ENST00000489430 BOLA2Q9H3K6 86 aa23.04■■□□□ 1.28
MRPL55-230ENST00000489430 ECHDC1Q9NTX5 307 aa23.04■■□□□ 1.28
MRPL55-230ENST00000489430 GINM1Q9NU53 330 aa23.04■■□□□ 1.28
MRPL55-230ENST00000489430 AK9Q5TCS8 1911 aa23.04■■□□□ 1.28
MRPL55-230ENST00000489430 TLR2O60603 784 aa23.03■■□□□ 1.28
MRPL55-230ENST00000489430 HLA-DOAP06340 250 aa23.03■■□□□ 1.28
MRPL55-230ENST00000489430 CAP2P40123 477 aa23.03■■□□□ 1.28
MRPL55-230ENST00000489430 DYNLL1P63167 89 aaKnown RBP23.03■■□□□ 1.28
MRPL55-230ENST00000489430 SP3Q02447 781 aa23.03■■□□□ 1.28
MRPL55-230ENST00000489430 ARHGEF6Q15052 776 aa23.03■■□□□ 1.28
MRPL55-230ENST00000489430 MIGA1Q8NAN2 632 aa23.03■■□□□ 1.28
MRPL55-230ENST00000489430 A0A0G2JLL6 359 aaPredicted RBP23.02■■□□□ 1.28
MRPL55-230ENST00000489430 USP5P45974 858 aa23.02■■□□□ 1.28
MRPL55-230ENST00000489430 MOGSQ13724 837 aa23.02■■□□□ 1.28
MRPL55-230ENST00000489430 PRRT2Q7Z6L0 340 aaPredicted RBP23.02■■□□□ 1.28
MRPL55-230ENST00000489430 MAGEB6P1A0A0J9YX57 407 aa23.01■■□□□ 1.27
MRPL55-230ENST00000489430 TCRBV5S4A2TA0A5A2 114 aa23.01■■□□□ 1.27
MRPL55-230ENST00000489430 SMARCA5O60264 1052 aaPredicted RBP23.01■■□□□ 1.27
MRPL55-230ENST00000489430 FBXO46Q6PJ61 603 aaPredicted RBP23.01■■□□□ 1.27
MRPL55-230ENST00000489430 EHD4Q9H223 541 aa23.01■■□□□ 1.27
MRPL55-230ENST00000489430 TAOK2Q9UL54 1235 aa23.01■■□□□ 1.27
MRPL55-230ENST00000489430 PALD1Q9ULE6 856 aa23.01■■□□□ 1.27
MRPL55-230ENST00000489430 SLC45A1Q9Y2W3 748 aa23.01■■□□□ 1.27
MRPL55-230ENST00000489430 ZNF532Q9HCE3 1301 aa23.01■■□□□ 1.27
MRPL55-230ENST00000489430 SLURP2P0DP57 97 aa23■■□□□ 1.27
MRPL55-230ENST00000489430 ZSCAN25Q6NSZ9 544 aa23■■□□□ 1.27
MRPL55-230ENST00000489430 TTC6Q86TZ1 520 aa23■■□□□ 1.27
MRPL55-230ENST00000489430 CRACR2BQ8N4Y2 399 aaPredicted RBP23■■□□□ 1.27
MRPL55-230ENST00000489430 CRBNQ96SW2 442 aa23■■□□□ 1.27
MRPL55-230ENST00000489430 TRIM34Q9BYJ4 488 aa23■■□□□ 1.27
MRPL55-230ENST00000489430 CRNKL1Q9BZJ0 848 aaKnown RBP23■■□□□ 1.27
MRPL55-230ENST00000489430 BCL11AQ9H165 835 aa23■■□□□ 1.27
MRPL55-230ENST00000489430 CCDC85CA6NKD9 419 aa22.99■■□□□ 1.27
MRPL55-230ENST00000489430 PDHXO00330 501 aa22.99■■□□□ 1.27
MRPL55-230ENST00000489430 ASNSP08243 561 aa22.99■■□□□ 1.27
MRPL55-230ENST00000489430 ADD2P35612 726 aa22.99■■□□□ 1.27
MRPL55-230ENST00000489430 UBE3CQ15386 1083 aa22.99■■□□□ 1.27
MRPL55-230ENST00000489430 FAM196BA6NMK8 535 aa22.98■■□□□ 1.27
MRPL55-230ENST00000489430 USP17L5A8MUK1 530 aa22.98■■□□□ 1.27
MRPL55-230ENST00000489430 HDAC1Q13547 482 aaPredicted RBP22.98■■□□□ 1.27
MRPL55-230ENST00000489430 ZNF280CQ8ND82 737 aa22.98■■□□□ 1.27
MRPL55-230ENST00000489430 PARK7Q99497 189 aaKnown RBP22.98■■□□□ 1.27
MRPL55-230ENST00000489430 AS3MTQ9HBK9 375 aa22.98■■□□□ 1.27
MRPL55-230ENST00000489430 TTC41PQ6P2S7 1318 aa22.98■■□□□ 1.27
MRPL55-230ENST00000489430 GPAT2Q6NUI2 795 aa22.97■■□□□ 1.27
MRPL55-230ENST00000489430 OTOP1Q7RTM1 612 aa22.97■■□□□ 1.27
MRPL55-230ENST00000489430 PROCA1Q8NCQ7 364 aaPredicted RBP22.97■■□□□ 1.27
MRPL55-230ENST00000489430 GCC1Q96CN9 775 aa22.97■■□□□ 1.27
MRPL55-230ENST00000489430 EDC3Q96F86 508 aaKnown RBP22.97■■□□□ 1.27
MRPL55-230ENST00000489430 DNAJC18Q9H819 358 aa22.97■■□□□ 1.27
MRPL55-230ENST00000489430 SERPINB13Q9UIV8 391 aa22.97■■□□□ 1.27
MRPL55-230ENST00000489430 GNRH1P01148 92 aa22.96■■□□□ 1.27
MRPL55-230ENST00000489430 TATDN1Q6P1N9 297 aa22.96■■□□□ 1.27
MRPL55-230ENST00000489430 C17orf99Q6UX52 265 aa22.96■■□□□ 1.27
MRPL55-230ENST00000489430 WDR18Q9BV38 432 aa22.96■■□□□ 1.27
MRPL55-230ENST00000489430 EFCC1Q9HA90 598 aa22.96■■□□□ 1.27
MRPL55-230ENST00000489430 SAP30BPQ9UHR5 308 aaKnown RBP22.96■■□□□ 1.27
MRPL55-230ENST00000489430 HPS5Q9UPZ3 1129 aa22.96■■□□□ 1.27
MRPL55-230ENST00000489430 TRIM17Q9Y577 477 aa22.96■■□□□ 1.27
MRPL55-230ENST00000489430 MYO5AQ9Y4I1 1855 aaKnown RBP22.96■■□□□ 1.27
MRPL55-230ENST00000489430 TRIM75PA6NK02 468 aa22.95■■□□□ 1.26
MRPL55-230ENST00000489430 DOCK1Q14185 1865 aa22.95■■□□□ 1.26
MRPL55-230ENST00000489430 RRP1BQ14684 758 aaKnown RBP22.95■■□□□ 1.26
MRPL55-230ENST00000489430 FOCADQ5VW36 1801 aa22.95■■□□□ 1.26
MRPL55-230ENST00000489430 CD99L2Q8TCZ2 262 aa22.95■■□□□ 1.26
MRPL55-230ENST00000489430 ADGRA2Q96PE1 1338 aa22.94■■□□□ 1.26
MRPL55-230ENST00000489430 ERC2O15083 957 aa22.94■■□□□ 1.26
MRPL55-230ENST00000489430 SPP2Q13103 211 aa22.94■■□□□ 1.26
MRPL55-230ENST00000489430 KIF22Q14807 665 aa22.94■■□□□ 1.26
MRPL55-230ENST00000489430 ATP8A2Q9NTI2 1148 aa22.94■■□□□ 1.26
MRPL55-230ENST00000489430 ZBTB47Q9UFB7 747 aaPredicted RBP22.94■■□□□ 1.26
MRPL55-230ENST00000489430 AGTPBP1Q9UPW5 1226 aa22.94■■□□□ 1.26
MRPL55-230ENST00000489430 RGS19P49795 217 aa22.93■■□□□ 1.26
MRPL55-230ENST00000489430 LACTBP83111 547 aaPredicted RBP22.93■■□□□ 1.26
MRPL55-230ENST00000489430 LRRFIP1Q32MZ4 808 aaKnown RBP22.93■■□□□ 1.26
MRPL55-230ENST00000489430 SH3D19Q5HYK7 790 aa22.93■■□□□ 1.26
MRPL55-230ENST00000489430 LCORLQ8N3X6 602 aa22.93■■□□□ 1.26
MRPL55-230ENST00000489430 KBTBD3Q8NAB2 608 aa22.93■■□□□ 1.26
MRPL55-230ENST00000489430 GLRX3O76003 335 aaKnown RBP22.92■■□□□ 1.26
MRPL55-230ENST00000489430 POLR3DP05423 398 aaPredicted RBP22.92■■□□□ 1.26
MRPL55-230ENST00000489430 ZFYP08048 801 aaPredicted RBP22.92■■□□□ 1.26
MRPL55-230ENST00000489430 PABPC4Q13310 644 aaKnown RBP eCLIP22.92■■□□□ 1.261e-6■■□□□ 12.9
MRPL55-230ENST00000489430 GADL1Q6ZQY3 521 aa22.92■■□□□ 1.26
MRPL55-230ENST00000489430 DCP1AQ9NPI6 582 aaPredicted RBP22.92■■□□□ 1.26
MRPL55-230ENST00000489430 MCM9Q9NXL9 1143 aa22.92■■□□□ 1.26
MRPL55-230ENST00000489430 PNMA3Q9UL41 463 aa22.92■■□□□ 1.26
MRPL55-230ENST00000489430 PTPN22Q9Y2R2 807 aa22.92■■□□□ 1.26
MRPL55-230ENST00000489430 C19orf81C9J6K1 198 aa22.91■■□□□ 1.26
MRPL55-230ENST00000489430 BACE1P56817 501 aa22.91■■□□□ 1.26
MRPL55-230ENST00000489430 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.91■■□□□ 1.26
MRPL55-230ENST00000489430 ZBTB21Q9ULJ3 1066 aa22.91■■□□□ 1.26
MRPL55-230ENST00000489430 CDK5RAP2Q96SN8 1893 aa22.9■■□□□ 1.26
MRPL55-230ENST00000489430 MBD4O95243 580 aa22.9■■□□□ 1.26
MRPL55-230ENST00000489430 PRMT2P55345 433 aa22.9■■□□□ 1.26
MRPL55-230ENST00000489430 GABPAQ06546 454 aa22.9■■□□□ 1.26
MRPL55-230ENST00000489430 DDRGK1Q96HY6 314 aa22.9■■□□□ 1.26
MRPL55-230ENST00000489430 ARMT1Q9H993 441 aa22.9■■□□□ 1.26
MRPL55-230ENST00000489430 SIPA1L1O43166 1804 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms